Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31616
         (322 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_36852| Best HMM Match : No HMM Matches (HMM E-Value=.)              31   0.16 
SB_4183| Best HMM Match : APH_6_hur (HMM E-Value=7.4)                  28   1.5  
SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.9  
SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   1.9  
SB_19121| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   4.5  
SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)               26   5.9  
SB_33661| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   5.9  
SB_11142| Best HMM Match : DUF473 (HMM E-Value=8)                      26   5.9  
SB_31961| Best HMM Match : EGF (HMM E-Value=0)                         26   7.9  
SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)         26   7.9  

>SB_36852| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 167

 Score = 31.5 bits (68), Expect = 0.16
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +1

Query: 49  VEAELNYAMDVYELNRRVNSSESIVG 126
           V  EL YA  +YEL+++ N +E IVG
Sbjct: 1   VAVELEYAKSMYELSQKANPNEQIVG 26


>SB_4183| Best HMM Match : APH_6_hur (HMM E-Value=7.4)
          Length = 270

 Score = 28.3 bits (60), Expect = 1.5
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 213 YSGHFTGWRSNGFTCICL 266
           ++GH   W SNG TC+ L
Sbjct: 201 FNGHTYSWHSNGVTCVLL 218


>SB_32431| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 322

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 204 CPCYSGHFTGWRSNGFTCIC 263
           CPC +G     + +GFTCIC
Sbjct: 130 CPCKNGGHCVNKVDGFTCIC 149


>SB_32430| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 337

 Score = 27.9 bits (59), Expect = 1.9
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = +3

Query: 204 CPCYSGHFTGWRSNGFTCIC 263
           CPC +G     + +GFTCIC
Sbjct: 130 CPCKNGGHCVNKVDGFTCIC 149


>SB_19121| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 229

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = -3

Query: 299 PCFPFGTPNGTQTYARKPIRPPASEVSRVTWTGSRHS 189
           P FPF T  G +  AR+   PPA+  S  T T ++HS
Sbjct: 148 PQFPFFT--GRKAGARRVGTPPANLASNPTSTTTQHS 182


>SB_40510| Best HMM Match : Y_phosphatase (HMM E-Value=0)
          Length = 734

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -1

Query: 154 WLLHCQSPTNQQYFQRN*LFCSA 86
           W++HC++   ++ FQR  LFC +
Sbjct: 451 WIVHCRTSLTRKLFQR--LFCGS 471


>SB_33661| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 425

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 43  DQVEAELNYAMDVYELNRRVNSSESIVGWW 132
           D+ + ++NY M+V    R VN     VGW+
Sbjct: 71  DEDDDDVNYQMEVMRRLRAVNIDHLHVGWY 100


>SB_11142| Best HMM Match : DUF473 (HMM E-Value=8)
          Length = 151

 Score = 26.2 bits (55), Expect = 5.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 127 WWATGNEVTNHSSVIHEYYSR 189
           W + GN+V  HS ++ E Y R
Sbjct: 101 WKSVGNQVFAHSKIVPELYKR 121


>SB_31961| Best HMM Match : EGF (HMM E-Value=0)
          Length = 2813

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +3

Query: 207  PCYSGHFTGWRSNGFTCICL 266
            PC +G F     N FTC CL
Sbjct: 1714 PCQNGGFCTDMINAFTCTCL 1733


>SB_48254| Best HMM Match : Exo_endo_phos (HMM E-Value=0.00076)
          Length = 1414

 Score = 25.8 bits (54), Expect = 7.9
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -3

Query: 245 IRPPASEVSRVTWTGSRHSRE*YSCITEEWLVTSLP 138
           +R  A++V  +     ++  +   C+TE WL +++P
Sbjct: 688 VRSLANKVDELECVARQNRADRVVCVTESWLTSNIP 723


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,193,202
Number of Sequences: 59808
Number of extensions: 227441
Number of successful extensions: 608
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 16,821,457
effective HSP length: 72
effective length of database: 12,515,281
effective search space used: 425519554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)