Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31615
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 38 0.004
At3g28840.1 68416.m03598 expressed protein 34 0.049
At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3, ubiqu... 33 0.15
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 33 0.15
At1g12080.2 68414.m01397 expressed protein 33 0.15
At1g12080.1 68414.m01396 expressed protein 33 0.15
At4g28180.1 68417.m04040 expressed protein 32 0.26
At1g62480.1 68414.m07050 vacuolar calcium-binding protein-relate... 32 0.26
At1g10390.1 68414.m01171 nucleoporin family protein contains Pfa... 32 0.26
At4g21670.1 68417.m03139 double-stranded RNA-binding domain (DsR... 31 0.35
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 31 0.35
At4g29060.1 68417.m04157 elongation factor Ts family protein sim... 31 0.61
At1g78650.1 68414.m09166 expressed protein weak similarity to DN... 31 0.61
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 31 0.61
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 30 1.1
At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 ... 29 1.9
At3g24870.1 68416.m03119 expressed protein 29 2.5
At5g05010.1 68418.m00532 clathrin adaptor complexes medium subun... 28 3.2
At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zi... 28 3.2
At1g26150.1 68414.m03192 protein kinase family protein similar t... 28 3.2
At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zi... 28 3.2
At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein ... 28 4.3
At1g08170.1 68414.m00902 histone H2B family protein similar to h... 28 4.3
At5g23890.1 68418.m02806 expressed protein weak similarity to SP... 27 5.7
At4g02715.1 68417.m00367 expressed protein 27 5.7
At2g46310.1 68415.m05760 AP2 domain-containing transcription fac... 27 5.7
At2g11005.1 68415.m01177 glycine-rich protein 27 5.7
At5g11430.1 68418.m01335 transcription elongation factor-related... 27 7.5
At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger) fa... 27 7.5
At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gen... 27 7.5
At3g25150.1 68416.m03140 nuclear transport factor 2 (NTF2) famil... 27 7.5
At2g29870.1 68415.m03627 major intrinsic family protein / MIP fa... 27 7.5
At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putat... 27 7.5
At1g72090.1 68414.m08333 radical SAM domain-containing protein /... 27 7.5
At5g17980.1 68418.m02109 C2 domain-containing protein contains I... 27 9.9
At4g39110.1 68417.m05538 protein kinase family protein contains ... 27 9.9
At3g52210.1 68416.m05735 mRNA capping enzyme family protein cont... 27 9.9
At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family... 27 9.9
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 9.9
At1g15030.1 68414.m01796 expressed protein 27 9.9
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM
TIGR01612: reticulocyte binding protein; contains
TIGRFAM TIGR00864: polycystin cation channel protein;
similar to fimbriae-associated protein Fap1
[Streptococcus parasanguinis] (GI:3929312)
Length = 1498
Score = 37.9 bits (84), Expect = 0.004
Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Frame = +1
Query: 25 TVPATETVTVDAGETVPLDVAESAPVALDEVAPEVPSEI-KAADVIETA---SIPASESS 192
T+ +E+V G P+ V E PV+++ P V SE+ +++DV T+ + AS+
Sbjct: 278 TINGSESVNDHVGSE-PVTVLE--PVSVENGHPPVESELERSSDVPFTSVAEKVNASDGE 334
Query: 193 PIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEE 351
+ S TV + SE SDVP E A QP+ +VVE+ +E+
Sbjct: 335 VLPDSGTVDVVVSEVSSDVPAETQALNAISLDSQPSGKDSVVENGNSKSESED 387
>At3g28840.1 68416.m03598 expressed protein
Length = 391
Score = 34.3 bits (75), Expect = 0.049
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = -2
Query: 401 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVI 222
G G T G++A+ G++AG SD+ GT+ G T S + T G + A+
Sbjct: 257 GYGATAGGATASGA--GTAAGGTTASDA---GTAAGTTASGAGTAAGGTTAAGAGAAAGA 311
Query: 221 PNTVSL-ATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADS 87
A G + AG + S S+ + T+G TSS T A S
Sbjct: 312 GAAAGAGAAAGGTTAAGGVSGSYGSSGGSASNTNGGTSSCGTSACS 357
Score = 29.5 bits (63), Expect = 1.4
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 401 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGIS 255
G G G++A G+ GS + +T GTS C S+ + G G S
Sbjct: 316 GAGAAAGGTTAAGGVSGSYGSSGGSASNTNGGTS-SCGTSACSNGGGAS 363
>At5g05560.1 68418.m00604 E3 ubiquitin ligase, putative E3,
ubiquitin ligase; contains similarity to Apc1/Tsg24
protein, the largest subunit of human anaphase-promoting
complex (APC/C) GI:11967711 from [Homo sapiens]
Length = 1678
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/79 (29%), Positives = 35/79 (44%)
Frame = +1
Query: 142 KAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVE 321
+A +V + +P S SPI+ S +L E + P PVA + + ++P +
Sbjct: 143 QAGEVNPPSHVPFSPVSPILGSREMLRQRKEVGNSSPQNFHSPVAH-DLISKRDMPCMSS 201
Query: 322 SETLAKPAEEPSIPLVAEE 378
L P EEP P EE
Sbjct: 202 HLILRDPLEEPG-PTYVEE 219
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 32.7 bits (71), Expect = 0.15
Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = -2
Query: 389 TEAGSSATRGILGSSAGFA---NVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIP 219
T S+A+ +S GF+ + + STT T+ ++++ + S GTS + +
Sbjct: 318 TSNTSNASASPFSASTGFSFLKSTASSTTSSTTPSAPPQTASSSSSFSFGTSANSGFNLS 377
Query: 218 NTVSLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSAT 81
S A S A SI + S T ATS+ A+ A ++T
Sbjct: 378 TGSSAAPASSTSGA---VFSIATTTTTSSSTPAATSAPASSAPAST 420
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 32.7 bits (71), Expect = 0.15
Identities = 35/125 (28%), Positives = 51/125 (40%), Gaps = 3/125 (2%)
Frame = +1
Query: 25 TVPATETVTVDAGETVPLDVAESAPVAL-DEVAPEVPSEIKAADVIETASIPASESSPIV 201
T A E V V +TV V E+ +E P V + A ++ET E +
Sbjct: 10 TPVAVENVEVPT-KTVEETVVETEVTQQPEESVPAVTEQKSEAPIVETNEEVVVEEAEKK 68
Query: 202 ASETVLGITS-EALSDVPLEIPVPVAELEQVQP-TEVPTVVESETLAKPAEEPSIPLVAE 375
ET + ++V E PV E ++ + TE P VVE E + EE + A
Sbjct: 69 DEETEKKTEEKDEKTEVITETPVVEEEEKKAEEVTETPAVVEEEKKTEVVEEKQTEVAAA 128
Query: 376 EPASV 390
E +V
Sbjct: 129 EEVAV 133
Score = 29.5 bits (63), Expect = 1.4
Identities = 24/87 (27%), Positives = 33/87 (37%)
Frame = +1
Query: 235 ALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEPASVIPVPVXXX 414
A +V PV V +E T TVVE+E +P E S+P V E+ + V
Sbjct: 2 ATVEVEQVTPVAVENVEVPTKTVEETVVETEVTQQPEE--SVPAVTEQKSEAPIVETNEE 59
Query: 415 XXXXXXXXXXXSXKRLVESAKEKIETI 495
++ E EK E I
Sbjct: 60 VVVEEAEKKDEETEKKTEEKDEKTEVI 86
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 32.7 bits (71), Expect = 0.15
Identities = 27/105 (25%), Positives = 46/105 (43%)
Frame = +1
Query: 76 LDVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPL 255
++V + PVA++ V EVP++ V+ET + +E +++ P+
Sbjct: 4 VEVEQVTPVAVENV--EVPTKTVEETVVETEKKDEETEKKTEEKDE----KTEVITETPV 57
Query: 256 EIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEPASV 390
V E + + TE P VVE E + EE + A E +V
Sbjct: 58 ---VEEEEKKAEEVTETPAVVEEEKKTEVVEEKQTEVAAAEEVAV 99
>At4g28180.1 68417.m04040 expressed protein
Length = 256
Score = 31.9 bits (69), Expect = 0.26
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +1
Query: 145 AADVIETASIPASESSPIVASETVLGITSEALS---DVPLEIPVPVAELEQVQPTEVPTV 315
+A + + A++ P + E+V + +++S +P+ +PVPV +L PTV
Sbjct: 6 SAGKVTAPPVAAAQIPPPLEEESVKEVVVQSVSVSVPIPISVPVPVPDL----VPSAPTV 61
Query: 316 VESETLAKPAEEPSIPLVAEEPASVIPVPV 405
+SE P P ++ + + V V
Sbjct: 62 SDSEAQVPLPLSPPAPEISHSKSDICSVSV 91
>At1g62480.1 68414.m07050 vacuolar calcium-binding protein-related
contains weak similarity to vacuolar calcium binding
protein [Raphanus sativus] gi|9049359|dbj|BAA99394
Length = 152
Score = 31.9 bits (69), Expect = 0.26
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Frame = +1
Query: 28 VPATETVTVDAGETVPLDVAES-APVAL---DEVAPEVPSEIKAADV--IETASIPASES 189
V + E TV E++P V ES APV + D V E I+ + +ET + +
Sbjct: 25 VESEEVTTVS--ESLPAPVTESQAPVEVTTKDLVVEETEKPIEETEEAQVETPEVVEIKK 82
Query: 190 SPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLV 369
ET + + E+ ++ +E E+E+ + E P VVE E KP E P V
Sbjct: 83 DEEAPVETPVVVEDESKTEEVVEAKKE-EEVEEKKTEEAPVVVEEE--KKPEAEEEKPAV 139
>At1g10390.1 68414.m01171 nucleoporin family protein contains Pfam
profiles: PF04096 nucleoporin autopeptidase, PF03093
nucleoporin FG repeat family
Length = 1041
Score = 31.9 bits (69), Expect = 0.26
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Frame = -2
Query: 383 AGSSATRGILGSSAGFANVSDSTTVGTS--VGCTCSSSATGTGISRGTSDKASLVIPNTV 210
+GSS T + GSS+ F + S G+S G SSS G+ +G + P+T+
Sbjct: 482 SGSSTTTSVFGSSSAFGTTTPSPLFGSSSTPGFGSSSSIFGSAPGQGATPAFGNSQPSTL 541
Query: 209 SLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSATSK 75
+T A T +A G G +S+ A G +S +K
Sbjct: 542 FNSTPSTGQTG--SAFGQTGSA---FGQFGQSSAPAFGQNSIFNK 581
>At4g21670.1 68417.m03139 double-stranded RNA-binding domain
(DsRBD)-containing protein contains Pfam profile
PF00035: Double-stranded RNA binding motif
Length = 981
Score = 31.5 bits (68), Expect = 0.35
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +1
Query: 97 PVALDEVAP-EVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPV 273
P++ D +A EV +K A +A +PA+ P +A+ + S + VP +PV V
Sbjct: 472 PLSFDGMADTEVERRLKEAISASSAVLPAANIDPRIAAPVQFPMASASSVSVP--VPVQV 529
Query: 274 AELEQVQPTEVPTVVESETLAKPAEEPSIP--LVAEEPA 384
+ + +QP+ + S +P + SI LV EP+
Sbjct: 530 VQ-QAIQPSAM--AFPSIPFQQPQQPTSIAKHLVPSEPS 565
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 31.5 bits (68), Expect = 0.35
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Frame = +1
Query: 40 ETVTVDAGETVPLDVAE----SAPVALDEVAP--EVPSEIKAADVIETASIPASESSPIV 201
E D T+P VAE +APV+ ++ P EV E +A S+ E +V
Sbjct: 20 EKPITDKEVTIPTPVAEKEEVAAPVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEETVV 79
Query: 202 ASETVLGITSEALSDVPLE 258
+E V+ +T+E + LE
Sbjct: 80 VAEKVVVLTAEEVQKKALE 98
Score = 27.9 bits (59), Expect = 4.3
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 6/101 (5%)
Frame = +1
Query: 223 ITSEALSDVPLEIPVPVAELEQVQP--TEVPTVVESETL----AKPAEEPSIPLVAEEPA 384
+ + ++D + IP PVAE E+V ++ V E E A AE V EE
Sbjct: 18 VKEKPITDKEVTIPTPVAEKEEVAAPVSDEKAVPEKEVTPEKEAPAAEAEKSVSVKEEET 77
Query: 385 SVIPVPVXXXXXXXXXXXXXXSXKRLVESAKEKIETIAAAT 507
V+ V K LV A K E A T
Sbjct: 78 VVVAEKVVVLTAEEVQKKALEEFKELVREALNKREFTAPVT 118
>At4g29060.1 68417.m04157 elongation factor Ts family protein
similar to SP|P35019 Elongation factor Ts (EF-Ts)
{Galdieria sulphuraria}; contains Pfam profiles PF00627:
UBA/TS-N domain, PF00889: Elongation factor TS, PF00575:
S1 RNA binding domain
Length = 953
Score = 30.7 bits (66), Expect = 0.61
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +1
Query: 85 AESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIP 264
AE PV V PE + + +A+V E+ +PA +S V S + E + E
Sbjct: 362 AEKPPVETP-VEPEAEASVTSAEVEESVCVPAEVTSEEVPSSETPKVVEEEVIATKAEDD 420
Query: 265 VPVAELEQVQPTEVPTVVESETLAKPAEE 351
P E EQ + + E+E + P E
Sbjct: 421 SPEKE-EQTE--TLAAAAEAEEVVPPIPE 446
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/66 (33%), Positives = 32/66 (48%)
Frame = +1
Query: 160 ETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAK 339
E A P E+ V E +TS + + + +P V E+V +E P VVE E +A
Sbjct: 360 EEAEKPPVETP--VEPEAEASVTSAEVEE-SVCVPAEVTS-EEVPSSETPKVVEEEVIAT 415
Query: 340 PAEEPS 357
AE+ S
Sbjct: 416 KAEDDS 421
>At1g78650.1 68414.m09166 expressed protein weak similarity to DNA
polymerase delta subunit 3 (DNA polymerase delta subunit
p66) (Swiss-Prot:Q15054) [Homo sapiens]
Length = 509
Score = 30.7 bits (66), Expect = 0.61
Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Frame = +1
Query: 10 YKNLXTVPATETVTVDAGETVPLDVAESAPVALD-EVAPEVPSEIKAADVIETASIPASE 186
Y+++ ++ + + V++ V L +S P D +V+PE+ SE A + + + +
Sbjct: 320 YEDVISLASPSSPKVNSRPDVELSSEDSGPEKPDADVSPEIKSEEPEASKEDRQNTASVD 379
Query: 187 SSPIVASETVLGITSEA 237
+S +++E + I SEA
Sbjct: 380 ASTTLSTEKIQAIGSEA 396
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 7/78 (8%)
Frame = +1
Query: 175 PASESSPIVASETVLGITSEALSDV-----PLEIPVPV-AELEQVQPTEVPTVVESETLA 336
P +P +SET T + SD P++ P PV + +PT+VPT SE+
Sbjct: 653 PTPTQAPTPSSETTQVPTPSSESDQSQILSPVQAPTPVQSSTPSSEPTQVPTPSSSESYQ 712
Query: 337 KPAEEP-SIPLVAEEPAS 387
P P P + P +
Sbjct: 713 APNLSPVQAPTPVQAPTT 730
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 29.9 bits (64), Expect = 1.1
Identities = 28/108 (25%), Positives = 45/108 (41%), Gaps = 8/108 (7%)
Frame = -2
Query: 395 GITEAGSSATRG--ILGSSAGFANVSD----STTVGTSVGCTCSSSATGTGISRGTSDKA 234
G T +G S RG I+ +++ +S+ S G +G CSS +G+G+ +
Sbjct: 382 GSTGSGGSLLRGLGIVSTTSSSMELSNHDALSLAPGLGLGLPCSSGGSGSGLKELMMGNS 441
Query: 233 SLVIPNTVSLATIGEDSLAGI--EAVSITSAALISLGTSGATSSKATG 96
S+ P +L +G G SA L S+G G +G
Sbjct: 442 SVFGPKQTTLDFLGLGRAVGNGGNTGGGLSALLTSIGGGGGIDLFGSG 489
>At5g24710.1 68418.m02919 WD-40 repeat family protein contains 3 Pfam
PF00400: WD domain, G-beta repeats;
Length = 1327
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +1
Query: 85 AESAPVALDEVA-PEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEI 261
A P+ + A PEV + + + +I A SS A +T + A ++ P
Sbjct: 1139 APKKPLLTQKTAQPEVAKPLALEEPTKPLAIEAPPSSE--APQTESAPETAAAAESPAPE 1196
Query: 262 PVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEP 381
VAE V SET A P + P V+E P
Sbjct: 1197 TAAVAESPAPGTAAVAEAPASETAAAPVDGPVTETVSEPP 1236
Score = 28.7 bits (61), Expect = 2.5
Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 2/128 (1%)
Frame = +1
Query: 7 LYKNLXTVPATETVTVDAGETVPLDVAESAPVALDEVAPEVPSEIKAADVIETASIPASE 186
L K + P+++T DA + + +L + + + P EI + +SI AS
Sbjct: 1084 LQKEVEKAPSSKT---DAASAFLASLEDPKLTSLSDASRKPPIEILPPGM---SSIFASI 1137
Query: 187 SSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPS--I 360
++P T E + LE P +E +E P + A AE P+
Sbjct: 1138 TAPKKPLLTQKTAQPEVAKPLALEEPTKPLAIEAPPSSEAPQTESAPETAAAAESPAPET 1197
Query: 361 PLVAEEPA 384
VAE PA
Sbjct: 1198 AAVAESPA 1205
>At3g24870.1 68416.m03119 expressed protein
Length = 1841
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +1
Query: 79 DVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVAS--ETVLGITSEALSDVP 252
+ ++A + + P+ +++K + + ++PA E VAS T + + + +D
Sbjct: 1707 NTTQTASMGTTKGMPQASNDLKNIKAVGSTAVPALEPPSCVASVQSTASKVVNNSNTDSA 1766
Query: 253 LEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLVAEEP 381
PV Q + V + + + P+EE P + E+P
Sbjct: 1767 GNDPVSTPNQGLAQKHGIKGVTQRQQQSLPSEEKR-PKLPEKP 1808
>At5g05010.1 68418.m00532 clathrin adaptor complexes medium
subunit-related contains pfam profile: PF00928 adaptor
complexes medium subunit family
Length = 527
Score = 28.3 bits (60), Expect = 3.2
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Frame = -2
Query: 377 SSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSAT----GTGISRGTSDKASLVIPNTV 210
SS G GS +GF +SD + T SS T +G+ G S K L+
Sbjct: 200 SSGGGGGYGSGSGFGMISDVDPINTKPKDRSRSSVTAPPKSSGMKLGKSGKNQLM----E 255
Query: 209 SLATIGEDSLAGIEAVSITSAA 144
SL GED + ++ + AA
Sbjct: 256 SLKAEGEDVIEDVKPTGQSKAA 277
>At4g00380.1 68417.m00052 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 635
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 275 ATGTGISRGTSDKASLVIPNTVSLATIGEDSLAG 174
A TG+S+G++ +++L N ++LA E+ LAG
Sbjct: 60 AHATGVSKGSATRSALQKSNHLALAKFLENDLAG 93
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 28.3 bits (60), Expect = 3.2
Identities = 29/99 (29%), Positives = 34/99 (34%), Gaps = 2/99 (2%)
Frame = +1
Query: 112 EVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQV 291
E +P P +A S P ESSP T T+ S P P P E
Sbjct: 97 EPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPITSPSPPTNPPPPPESPPS 156
Query: 292 QPTEVP--TVVESETLAKPAEEPSIPLVAEEPASVIPVP 402
P P + L P+ P L PAS IP P
Sbjct: 157 LPAPDPPSNPLPPPKLVPPSHSPPRHL-PSPPASEIPPP 194
>At1g15910.1 68414.m01908 XH/XS domain-containing protein / XS zinc
finger domain-containing protein contains Pfam domains
PF03469: XH domain, PF03468: XS domain and PF03470: XS
zinc finger domain
Length = 634
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 275 ATGTGISRGTSDKASLVIPNTVSLATIGEDSLAG 174
A TG+S+G++ +++L N ++LA E+ LAG
Sbjct: 59 AHATGVSKGSATRSALQKANHLALAMFLENELAG 92
>At2g28200.1 68415.m03424 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 27.9 bits (59), Expect = 4.3
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = -2
Query: 395 GITEAGSSATRGILGSSAGFANVSDS--TTVGTSVGCTCSSSATGTGISRGTSDKASLVI 222
G E GS T+ I G S + T T+V T SSSA G+G R SD+ + +
Sbjct: 2 GQDEVGSDQTQIIKGKRTKRQRSSSTFVVTAATTVTST-SSSAGGSGGERAVSDEYNSAV 60
Query: 221 PNTVSL-ATIGEDSLA 177
+ V+ T E+ +A
Sbjct: 61 SSPVTTDCTQEEEDMA 76
>At1g08170.1 68414.m00902 histone H2B family protein similar to
histone H2B from Chlamydomonas reinhardtii [SP|P54347,
SP|P54346, SP|P50565], Volvox carteri [SP|P16867,
SP|P16868]; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 243
Score = 27.9 bits (59), Expect = 4.3
Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Frame = +1
Query: 64 ETVPLDVAESA-PVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEAL 240
ET+ + V E P + E A + ++ + ++ E V E L +
Sbjct: 20 ETIKVTVTEEGDPCVITETANDQETQDLTFSIPVGENVTTVEIPVEVPDERSLPVGENVT 79
Query: 241 SDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPS 357
+ ++IPV + QP E P V E +P E P+
Sbjct: 80 T---VKIPVDDRDESSPQPPETPVEVRDEPSPQPPETPA 115
>At5g23890.1 68418.m02806 expressed protein weak similarity to
SP|P12957 Caldesmon (CDM) {Gallus gallus}
Length = 946
Score = 27.5 bits (58), Expect = 5.7
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +1
Query: 64 ETVPLDVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVL-GITSEAL 240
E + LD S V ++ E P + + + + +S S + L GI + A
Sbjct: 242 EPILLDAESSNLVGVENTNSEDPESLLNTEPTNVSDLENHVNSQKEDSLSSLSGIDAYAA 301
Query: 241 SDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPS 357
S E+P ++L+ ++ + ++ET AEE S
Sbjct: 302 SGTVTELPEVSSQLDSTSKPQIVPLNDTETAFATAEELS 340
>At4g02715.1 68417.m00367 expressed protein
Length = 205
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/81 (22%), Positives = 33/81 (40%)
Frame = +1
Query: 28 VPATETVTVDAGETVPLDVAESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVAS 207
+P +VD+G T P+ +A + + E + ++ E + P +SP AS
Sbjct: 77 LPVFHHPSVDSGRTSPIPIANCRGSQIRRCSSEFVDKRRSLSYSELWAGPTYSNSPPPAS 136
Query: 208 ETVLGITSEALSDVPLEIPVP 270
+ + + V L P P
Sbjct: 137 VPIPKFSLQQKRTVSLTFPAP 157
>At2g46310.1 68415.m05760 AP2 domain-containing transcription
factor, putative
Length = 294
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/79 (25%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Frame = +1
Query: 85 AESAPVALDEVAPEVPSEIKAADVIETASIPASE---SSPIVASETVLGITSEALSDVPL 255
AE A + D A + + + P +E +P++ ETV G S S + L
Sbjct: 131 AEEAAIGYDRAAIRIKGHNAQTNFLTPPPSPTTEVLPETPVIDLETVSGCDSARESQISL 190
Query: 256 EIPVPVAELEQVQPTEVPT 312
P V TE T
Sbjct: 191 CSPTSVLRFSHNDETEYRT 209
>At2g11005.1 68415.m01177 glycine-rich protein
Length = 170
Score = 27.5 bits (58), Expect = 5.7
Identities = 20/90 (22%), Positives = 41/90 (45%)
Frame = -2
Query: 401 GTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVI 222
G+ ++ ++ G G S GF + SD+ +V + S G+G G +D + +
Sbjct: 41 GSRDSDGSGDSSGGGSGDSGGFGDNSDNNSVSSDSSGGGSRDGGGSG-DNGNTDDGVVAL 99
Query: 221 PNTVSLATIGEDSLAGIEAVSITSAALISL 132
+ L T G A + +++ AA++ +
Sbjct: 100 VMSFVLVT-GVAPTATVVLMTVAVAAVVGV 128
>At5g11430.1 68418.m01335 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 871
Score = 27.1 bits (57), Expect = 7.5
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = +1
Query: 88 ESAPVALDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPV 267
E+ P +DEV PE + +K D I A+ S GI ++S V V
Sbjct: 501 EAKPEKIDEVTPEFDANVKVDDDISRVE-KAAALSDDKGERAWDGILQLSMSSV-----V 554
Query: 268 PVAEL----EQVQPTEVPTVVE 321
PVA + E+ + +E P +VE
Sbjct: 555 PVAGIFKSGEKAETSEWPAMVE 576
>At5g07040.1 68418.m00797 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 159
Score = 27.1 bits (57), Expect = 7.5
Identities = 25/65 (38%), Positives = 32/65 (49%), Gaps = 10/65 (15%)
Frame = +1
Query: 232 EALSDVPLEIPVPVAE----LEQVQPTEVPTVV--ESETLAKPAEEP-SIPLV---AEEP 381
EA SDV L++P P AE L++ P +V +S L +P P SI L A EP
Sbjct: 47 EATSDVVLDLPSPAAEVKLGLDRPVIESYPRIVLGDSRRLPRPNNGPCSICLCDYEAREP 106
Query: 382 ASVIP 396
IP
Sbjct: 107 VRCIP 111
>At3g28780.1 68416.m03592 glycine-rich protein similar to H41 gene
for histone protein GB:X15142 GI:3204 [Physarum
polycephalum]
Length = 614
Score = 27.1 bits (57), Expect = 7.5
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = -2
Query: 404 TGTGITEAGSSATRGILGSSAGFANVSDSTTVGTSVGCTC----SSSATGTGISRGTSDK 237
TG + AGS + GS + S STT G++ G + SSSA G S +
Sbjct: 167 TGDSGSSAGSPSYPSDDGSGSTAGGPSGSTTDGSAGGESSMGGDSSSAGAAGESGSAATA 226
Query: 236 ASLVIPNTVSLATIGEDSLAGIEAVSITSAALISLGTSGATSSKATGADSAT 81
S S G DS G + AA + GA ++ +G + T
Sbjct: 227 DSGDAAGADSGGAAGADS-GGAASADSGGAAAGETASGGAAAADTSGGSAET 277
>At3g25150.1 68416.m03140 nuclear transport factor 2 (NTF2) family
protein / RNA recognition motif (RRM)-containing protein
contains Pfam profile: PF00076 RNA recognition motif.
(a.k.a. RRM, RBD, or RNP domain); similar to
ras-GTPase-activating protein (GAP<120>)
SH3-domain-binding protein 2 GB:NP_035946 [Mus musculus]
Length = 488
Score = 27.1 bits (57), Expect = 7.5
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 2/114 (1%)
Frame = +1
Query: 31 PATETVTVDAGETVPLDVAESAPVALDEV--APEVPSEIKAADVIETASIPASESSPIVA 204
P+ + A E + + AP+ + +V + EI + ++P+ A
Sbjct: 203 PSEDEQVSAAEEALVTETVNEAPIEVQKVGESDSRTGEIPKRSYASIVKVMKENAAPMSA 262
Query: 205 SETVLGITSEALSDVPLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPL 366
S T + + D + IP+P E+ V E+ + A PSI L
Sbjct: 263 SRTPTKVEPKKQEDQAIHIPLPTPLSEKSDSGANVAVNENNQENERALGPSIYL 316
>At2g29870.1 68415.m03627 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 139
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3
Query: 246 CASRNTCSSSGTRASATD 299
CA+RNT SSSG+ S +D
Sbjct: 3 CAARNTMSSSGSSPSGSD 20
>At2g13100.1 68415.m01436 glycerol-3-phosphate transporter, putative
/ glycerol 3-phosphate permease, putative similar to
glycerol-3-phosphate transporter (glycerol 3-phosphate
permease) [Homo sapiens] GI:7543982; contains Pfam
profile PF00083: major facilitator superfamily protein
Length = 493
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 312 CWYFSRLHLLEFRYWNRYFERH 247
C +FS+L F YW Y+ RH
Sbjct: 293 CLFFSKLVAYTFLYWLPYYLRH 314
>At1g72090.1 68414.m08333 radical SAM domain-containing protein /
TRAM domain-containing protein contains Pfam profiles
PF00919: UPF0004 family protein, PF04055: radical SAM
domain protein, PF01938: TRAM domain
Length = 601
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 326 SDSTTVGTSVGCTCSSSATGTGISRGTSDKASLVIPNTVSLATIGEDSLAGIEAVSI 156
+D + T + S SA T I+RG S K LVI V + L G+ V +
Sbjct: 101 ADLWLINTCTVKSPSQSAMSTLITRGRSGKKPLVIAGCVPQGSRDLKELEGVSVVGV 157
>At5g17980.1 68418.m02109 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1049
Score = 26.6 bits (56), Expect = 9.9
Identities = 30/92 (32%), Positives = 33/92 (35%), Gaps = 9/92 (9%)
Frame = +1
Query: 106 LDEVAPEVPSEIKAADVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELE 285
L+ V E E KA E+ P + P ETV P E P P E
Sbjct: 149 LETVVEEKTEETKAEGPDESKPPPETNDIPAEVKETVKPPQPPPEESSPAEGPKPDEEAS 208
Query: 286 ---QVQPT---EVPTVVES---ETLAKPAEEP 354
Q T E P ES E AKP EEP
Sbjct: 209 PPLQENATVGGEEPPASESDKNEAEAKPVEEP 240
>At4g39110.1 68417.m05538 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 878
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 151 DVIETASIPASESSPIVASETVLGITSEALSDVPLEIPVPVAELEQVQPTEV 306
DV+ S+P S+ SPI S T T+EA + +PVP A++E+ T V
Sbjct: 819 DVVTPGSVPVSDPSPITPSVT----TNEAAT-----VPVP-AKVEENSGTAV 860
>At3g52210.1 68416.m05735 mRNA capping enzyme family protein
contains Pfam profile PF03291: mRNA capping enzyme,
large subunit
Length = 354
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 250 PLEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPL--VAEEPASVIPVP 402
PL P+P E+P + + PAE+PS L + E+ + P P
Sbjct: 293 PLTTPIPFESSNNHDERELPVITVITDASAPAEDPSQGLGKIVEQKGILGPGP 345
>At2g28240.1 68415.m03428 hydroxyproline-rich glycoprotein family
protein
Length = 660
Score = 26.6 bits (56), Expect = 9.9
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 8/122 (6%)
Frame = +1
Query: 34 ATETVTVDAGETVPLDVAESAPVA----LDEVAPEVPSEIKAADVIETASIP---ASESS 192
AT+T TV A + + V ++ AP PS + AA+ + +A+ P + +
Sbjct: 282 ATDTATVRAPRSSQHSTQQQQAVQTNRHMNSTAPPRPS-VTAAEPMNSAAPPRPSVTAAE 340
Query: 193 PIVASETVLGITSEALSDVP-LEIPVPVAELEQVQPTEVPTVVESETLAKPAEEPSIPLV 369
P+ ++ + A + P L P+P Q P VES T + P +
Sbjct: 341 PMNSTAPPRPSVTAAEATPPNLSAPLPHCNTPQPSPISQQAAVESNTQMQSTALPRPSVT 400
Query: 370 AE 375
AE
Sbjct: 401 AE 402
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 26.6 bits (56), Expect = 9.9
Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 3/86 (3%)
Frame = +1
Query: 157 IETASIPASESSPIVASETVLGITSEALSDVPLE---IPVPVAELEQVQPTEVPTVVESE 327
I TA A S P+ S + P+ +P PV +PT P V
Sbjct: 19 IATADYYAPSSPPVYTSPVNKPTLPPPVYTPPVHKPTLPPPVYTPPVHKPTLSPPVYTKP 78
Query: 328 TLAKPAEEPSIPLVAEEPASVIPVPV 405
TL PA P + PA V PV
Sbjct: 79 TLPPPAYTPPVYNKPTLPAPVYTPPV 104
>At1g15030.1 68414.m01796 expressed protein
Length = 360
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1
Query: 144 FNFTWHLRSNFI*SYGCRFSH 82
FNFT R+ SYGCR SH
Sbjct: 6 FNFTQLQRAQIDVSYGCRSSH 26
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.303 0.122 0.314
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,583,627
Number of Sequences: 28952
Number of extensions: 159038
Number of successful extensions: 441
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 439
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.8 bits)
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