Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31613
(411 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;... 151 5e-36
UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214; ... 149 2e-35
UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78; H... 148 5e-35
UniRef50_Q6J977 Cluster: Cytochrome c oxidase subunit 2; n=4; En... 130 1e-29
UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4; Ob... 127 8e-29
UniRef50_Q37545 Cluster: Cytochrome c oxidase subunit 2; n=58; r... 122 2e-27
UniRef50_Q9XMZ4 Cluster: Cytochrome c oxidase subunit 2; n=16; N... 119 3e-26
UniRef50_P00405 Cluster: Cytochrome c oxidase subunit 2; n=1386;... 118 6e-26
UniRef50_Q9TAK4 Cluster: Cytochrome c oxidase subunit 2; n=5; Eu... 116 2e-25
UniRef50_Q02212 Cluster: Cytochrome c oxidase subunit 2; n=779; ... 116 2e-25
UniRef50_Q8SHP9 Cluster: Cytochrome c oxidase subunit 2; n=83; E... 114 6e-25
UniRef50_P48889 Cluster: Cytochrome c oxidase subunit 2; n=232; ... 114 6e-25
UniRef50_Q9MGB5 Cluster: Cytochrome c oxidase subunit 2; n=91; E... 113 2e-24
UniRef50_P05490 Cluster: Cytochrome c oxidase subunit 2; n=31; M... 111 7e-24
UniRef50_Q9TA26 Cluster: Cytochrome c oxidase subunit 2; n=147; ... 111 7e-24
UniRef50_P00403 Cluster: Cytochrome c oxidase subunit 2; n=3453;... 111 7e-24
UniRef50_Q5P9Z0 Cluster: Cytochrome c oxidase subunit 2; n=7; Ri... 108 4e-23
UniRef50_Q8HIN6 Cluster: Cytochrome c oxidase subunit 2; n=4; As... 108 4e-23
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 108 4e-23
UniRef50_P20387 Cluster: Cytochrome c oxidase subunit 2 precurso... 108 4e-23
UniRef50_Q9AQY5 Cluster: Cytochrome c oxidase subunit 2; n=6; Ch... 107 7e-23
UniRef50_Q2HJL3 Cluster: Cytochrome c oxidase subunit 2; n=10; P... 106 2e-22
UniRef50_Q6Y409 Cluster: Cytochrome c oxidase subunit 2; n=2; Co... 105 3e-22
UniRef50_Q9B8A2 Cluster: Cytochrome c oxidase subunit 2; n=2; Bi... 104 6e-22
UniRef50_P00410 Cluster: Cytochrome c oxidase subunit 2 precurso... 104 6e-22
UniRef50_Q2TUA5 Cluster: Cytochrome c oxidase subunit 2; n=7; Eu... 103 1e-21
UniRef50_Q6E0W2 Cluster: Cytochrome c oxidase subunit 2; n=59; C... 103 1e-21
UniRef50_Q4ULU3 Cluster: Probable cytochrome c oxidase subunit 2... 103 2e-21
UniRef50_Q8LWY7 Cluster: Cytochrome c oxidase subunit 2; n=13; E... 101 8e-21
UniRef50_Q9T7K8 Cluster: Cytochrome c oxidase subunit 2; n=2; Cr... 101 8e-21
UniRef50_Q94YZ5 Cluster: Cytochrome c oxidase subunit 2; n=1; Py... 100 1e-20
UniRef50_Q2TUE5 Cluster: Cytochrome c oxidase subunit 2; n=117; ... 100 1e-20
UniRef50_Q2TUI7 Cluster: Cytochrome c oxidase subunit 2; n=2; Fu... 99 2e-20
UniRef50_P21534 Cluster: Cytochrome c oxidase subunit 2; n=88; E... 99 2e-20
UniRef50_Q4L1C0 Cluster: Cytochrome c oxidase subunit 2; n=1; Le... 99 4e-20
UniRef50_Q94XD9 Cluster: Cytochrome c oxidase subunit 2; n=1; Th... 97 9e-20
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 97 1e-19
UniRef50_Q697G5 Cluster: Cytochrome c oxidase subunit 2; n=29; N... 97 2e-19
UniRef50_Q9TAP1 Cluster: Cytochrome c oxidase subunit 2; n=12; A... 96 3e-19
UniRef50_Q73I77 Cluster: Cytochrome c oxidase subunit 2; n=4; Wo... 95 4e-19
UniRef50_Q94QP4 Cluster: Cytochrome c oxidase subunit 2; n=2; Un... 95 5e-19
UniRef50_Q2W5A1 Cluster: Cytochrome c oxidase subunit 2; n=3; Ma... 93 2e-18
UniRef50_Q9T6M4 Cluster: Cytochrome c oxidase subunit 2; n=7; Ch... 92 3e-18
UniRef50_Q15K52 Cluster: Cytochrome c oxidase subunit 2; n=1; Fl... 92 3e-18
UniRef50_A2T4Y2 Cluster: Cytochrome c oxidase subunit 2; n=13; T... 92 3e-18
UniRef50_Q5DNB5 Cluster: Cytochrome c oxidase subunit 2; n=1; Le... 92 5e-18
UniRef50_Q2I6Y9 Cluster: Cytochrome c oxidase subunit 2; n=1; Lo... 90 1e-17
UniRef50_Q0QJ97 Cluster: Cytochrome c oxidase subunit 2; n=1; Xe... 90 2e-17
UniRef50_Q8HN46 Cluster: Cytochrome c oxidase subunit 2; n=5; On... 89 2e-17
UniRef50_Q9G8P0 Cluster: Cytochrome c oxidase subunit 2; n=1; Na... 89 4e-17
UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2; Te... 88 8e-17
UniRef50_Q64LH9 Cluster: Cytochrome c oxidase subunit 2; n=1; Pa... 87 1e-16
UniRef50_Q3C2K4 Cluster: Cytochrome c oxidase subunit 2; n=3; Le... 87 1e-16
UniRef50_Q950S5 Cluster: Cytochrome c oxidase subunit 2; n=8; Fu... 87 2e-16
UniRef50_P24894 Cluster: Cytochrome c oxidase subunit 2; n=51; C... 86 3e-16
UniRef50_A5VD54 Cluster: Cytochrome c oxidase, subunit II precur... 85 5e-16
UniRef50_Q6NBJ7 Cluster: Cytochrome c oxidase subunit II precurs... 85 7e-16
UniRef50_Q5KT47 Cluster: Cytochrome c oxidase subunit 2; n=1; Do... 85 7e-16
UniRef50_A0ASU6 Cluster: Cytochrome c oxidase subunit 2; n=1; Hy... 84 9e-16
UniRef50_Q00227 Cluster: Cytochrome c oxidase subunit 2; n=5; My... 83 2e-15
UniRef50_Q2GDE6 Cluster: Cytochrome c oxidase subunit 2; n=1; Ne... 83 2e-15
UniRef50_Q8LWF1 Cluster: Cytochrome c oxidase subunit 2; n=8; Bi... 83 2e-15
UniRef50_Q985X2 Cluster: Cytochrome c oxidase subunit 2; n=18; A... 83 3e-15
UniRef50_A3VPG7 Cluster: Cytochrome c oxidase subunit 2; n=1; Pa... 83 3e-15
UniRef50_Q0BPU5 Cluster: Cytochrome c oxidase subunit 2; n=1; Gr... 82 5e-15
UniRef50_Q9RM99 Cluster: Cytochrome c oxidase subunit II precurs... 81 7e-15
UniRef50_Q0C3D3 Cluster: Cytochrome c oxidase subunit 2; n=1; Hy... 81 7e-15
UniRef50_Q3KSX4 Cluster: Cytochrome c oxidase subunit 2; n=4; Ma... 81 9e-15
UniRef50_P08306 Cluster: Cytochrome c oxidase subunit 2 precurso... 81 9e-15
UniRef50_Q9A2Z9 Cluster: Cytochrome c oxidase subunit 2; n=8; Al... 81 1e-14
UniRef50_Q8LWE8 Cluster: Cytochrome c oxidase subunit 2; n=10; U... 81 1e-14
UniRef50_A5II83 Cluster: Cytochrome c oxidase subunit 2; n=5; Le... 80 2e-14
UniRef50_Q0HPW4 Cluster: Cytochrome c oxidase, subunit II precur... 79 3e-14
UniRef50_Q7P0G8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ch... 79 5e-14
UniRef50_Q06SA7 Cluster: Cytochrome c oxidase subunit 2; n=1; Ac... 79 5e-14
UniRef50_Q03736 Cluster: Cytochrome c oxidase subunit 2 precurso... 79 5e-14
UniRef50_Q9B4Q4 Cluster: Cytochrome c oxidase subunit 2; n=153; ... 78 6e-14
UniRef50_Q9XKD8 Cluster: Cytochrome c oxidase subunit 2; n=1; Di... 78 8e-14
UniRef50_Q1GTA3 Cluster: Cytochrome-c oxidase precursor; n=6; Sp... 77 1e-13
UniRef50_A2D6F1 Cluster: Cytochrome c oxidase subunit 2; n=2; Gy... 76 2e-13
UniRef50_A1Z3B2 Cluster: Cytochrome c oxidase subunit 2; n=2; Bi... 76 3e-13
UniRef50_A4A925 Cluster: Cytochrome c oxidase subunit 2; n=4; Ga... 75 4e-13
UniRef50_Q9B8W2 Cluster: Cytochrome c oxidase subunit 2; n=17; E... 75 4e-13
UniRef50_Q9B8U3 Cluster: Cytochrome c oxidase subunit 2; n=7; Sc... 75 4e-13
UniRef50_A5G0I4 Cluster: Cytochrome c oxidase, subunit II precur... 75 6e-13
UniRef50_Q06Y85 Cluster: Cytochrome c oxidase subunit 2; n=3; As... 75 7e-13
UniRef50_Q8PFT5 Cluster: Cytochrome c oxidase subunit 2; n=8; Ga... 74 1e-12
UniRef50_Q47G11 Cluster: Cytochrome c oxidase, subunit II:Cytoch... 74 1e-12
UniRef50_Q1HBC0 Cluster: Cytochrome c oxidase subunit 2; n=1; St... 73 2e-12
UniRef50_Q5W913 Cluster: Cytochrome c oxidase subunit 2; n=1; Li... 73 3e-12
UniRef50_P14545 Cluster: Cytochrome c oxidase subunit 2; n=17; K... 71 9e-12
UniRef50_Q9B8Y1 Cluster: Cytochrome c oxidase subunit 2; n=3; Di... 71 1e-11
UniRef50_A3QRI4 Cluster: Cytochrome c oxidase subunit 2; n=1; Mi... 70 2e-11
UniRef50_Q09QS8 Cluster: Cytochrome c oxidase subunit 2; n=3; Em... 69 3e-11
UniRef50_O21346 Cluster: Cytochrome c oxidase subunit 2; n=6; Pr... 68 9e-11
UniRef50_UPI0000E87C4E Cluster: cytochrome c oxidase, subunit II... 67 2e-10
UniRef50_Q4FE08 Cluster: Cytochrome c oxidase subunit 2; n=1; Pl... 67 2e-10
UniRef50_Q0ABY9 Cluster: Cytochrome c oxidase, subunit II precur... 66 3e-10
UniRef50_Q9XN19 Cluster: Cytochrome c oxidase subunit 2; n=1; Eu... 66 3e-10
UniRef50_Q06SC1 Cluster: Cytochrome c oxidase subunit 2; n=1; Hi... 66 3e-10
UniRef50_Q0Z878 Cluster: Cytochrome c oxidase subunit 2; n=5; Me... 66 3e-10
UniRef50_Q0VNA0 Cluster: Cytochrome c oxidase subunit 2; n=1; Al... 65 5e-10
UniRef50_Q950Y9 Cluster: Cytochrome c oxidase subunit 2; n=5; Te... 65 5e-10
UniRef50_Q39CP6 Cluster: Cytochrome c oxidase subunit 2; n=62; P... 65 6e-10
UniRef50_Q8WF55 Cluster: Cytochrome c oxidase subunit 2; n=1; Ve... 64 1e-09
UniRef50_Q1YUZ5 Cluster: Cytochrome c oxidase subunit 2; n=2; Ga... 63 2e-09
UniRef50_A7LIC0 Cluster: Cytochrome c oxidase subunit 2; n=1; Ar... 63 2e-09
UniRef50_A5NSI7 Cluster: Cytochrome c, monohaem precursor; n=3; ... 60 1e-08
UniRef50_Q9T6E1 Cluster: Cytochrome c oxidase subunit 2; n=12; A... 60 1e-08
UniRef50_Q3SQ74 Cluster: Cytochrome c oxidase, subunit II precur... 60 2e-08
UniRef50_A4VKM4 Cluster: Heme/copper-type cytochrome/quinol oxid... 60 2e-08
UniRef50_Q98P34 Cluster: Cytochrome oxidase subunit II; n=2; Rhi... 59 4e-08
UniRef50_Q5ICD5 Cluster: Cytochrome c oxidase subunit 2; n=6; Co... 58 5e-08
UniRef50_Q5P900 Cluster: Chain II protein of putative cytochrome... 57 2e-07
UniRef50_Q8M1Z0 Cluster: Cytochrome c oxidase subunit 2; n=23; C... 57 2e-07
UniRef50_Q6TY94 Cluster: Cytochrome c oxidase subunit 2; n=1; Xi... 56 2e-07
UniRef50_Q60020 Cluster: Cytochrome c-aa3 oxidase subunit IIc pr... 56 3e-07
UniRef50_Q1YMW9 Cluster: Putative cytochrome oxidase subunit II;... 56 3e-07
UniRef50_A6C5X8 Cluster: Cytochrome c oxidase subunit 2; n=1; Pl... 56 4e-07
UniRef50_Q67ML2 Cluster: Cytochrome c oxidase subunit 2; n=1; Sy... 55 5e-07
UniRef50_Q07JU2 Cluster: Cytochrome c oxidase, subunit II; n=3; ... 55 5e-07
UniRef50_A3U3Z7 Cluster: Cytochrome c oxidase, subunit IIc; n=7;... 55 5e-07
UniRef50_Q5ICE0 Cluster: Cytochrome c oxidase subunit 2; n=3; Er... 55 5e-07
UniRef50_Q30IA8 Cluster: Cytochrome c oxidase subunit 2; n=3; Di... 54 9e-07
UniRef50_Q04441 Cluster: Cytochrome c oxidase subunit 2 precurso... 54 9e-07
UniRef50_A7HQK3 Cluster: Cytochrome c oxidase subunit II; n=1; P... 54 1e-06
UniRef50_A7D014 Cluster: Cytochrome c oxidase subunit II; n=1; O... 54 1e-06
UniRef50_Q7USM3 Cluster: Cytochrome-c oxidase chain II/c; n=2; P... 53 2e-06
UniRef50_Q2J8B8 Cluster: Cytochrome c oxidase subunit 2; n=3; Fr... 53 3e-06
UniRef50_Q1H1C0 Cluster: Cytochrome c oxidase subunit 2; n=1; Me... 53 3e-06
UniRef50_A0G4F1 Cluster: Cytochrome c oxidase, subunit II; n=2; ... 53 3e-06
UniRef50_Q5V019 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 52 3e-06
UniRef50_Q41CV8 Cluster: Cytochrome-c oxidase precursor; n=1; Ex... 52 5e-06
UniRef50_Q8ER77 Cluster: Cytochrome c oxidase subunit 2; n=1; Oc... 52 6e-06
UniRef50_A6DSP0 Cluster: Cytochrome c oxidase subunit 2; n=1; Le... 52 6e-06
UniRef50_Q094E4 Cluster: Cytochrome c oxidase subunit II; n=1; S... 51 8e-06
UniRef50_A7H8L3 Cluster: Cytochrome c oxidase subunit II; n=5; C... 51 8e-06
UniRef50_A0KDK6 Cluster: Cytochrome c, monohaem; n=22; Burkholde... 51 8e-06
UniRef50_Q60IM7 Cluster: Putative uncharacterized protein CBG249... 51 1e-05
UniRef50_A3TK83 Cluster: Cytochrome c oxidase subunit 2; n=1; Ja... 50 2e-05
UniRef50_A0VUI7 Cluster: Cytochrome c, monohaem; n=1; Dinoroseob... 50 2e-05
UniRef50_Q5V3P5 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 50 2e-05
UniRef50_Q3JAA7 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 49 3e-05
UniRef50_Q01R98 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 49 3e-05
UniRef50_Q5P1W3 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 49 4e-05
UniRef50_Q2IK63 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 49 4e-05
UniRef50_Q1NHI1 Cluster: Cytochrome c oxidase, subunit IIc; n=1;... 49 4e-05
UniRef50_Q82AL0 Cluster: Probable cytochrome c oxidase subunit 2... 49 4e-05
UniRef50_Q1YF16 Cluster: Cytochrome c oxidase subunit 2; n=4; Al... 48 6e-05
UniRef50_Q6A9V8 Cluster: Cytochrome c oxidase subunit 2; n=1; Pr... 48 7e-05
UniRef50_A4FAC2 Cluster: Cytochrome c oxidase subunit 2; n=1; Sa... 48 7e-05
UniRef50_Q2YBV3 Cluster: Cytochrome c oxidase, subunit II precur... 48 1e-04
UniRef50_A4A2K3 Cluster: Cytochrome c oxidase subunit 2; n=1; Bl... 48 1e-04
UniRef50_A1SLF8 Cluster: Cytochrome c oxidase subunit 2; n=1; No... 47 2e-04
UniRef50_Q3E3Q0 Cluster: Cytochrome c oxidase subunit 2; n=2; Ch... 46 2e-04
UniRef50_Q1J1C4 Cluster: Cytochrome c oxidase subunit 2; n=1; De... 46 2e-04
UniRef50_Q11EK7 Cluster: Cytochrome c oxidase, subunit II precur... 46 2e-04
UniRef50_Q8F9F3 Cluster: Cytochrome c oxidase subunit 2; n=5; Ba... 46 3e-04
UniRef50_Q01PD2 Cluster: Cytochrome c oxidase, subunit II precur... 46 3e-04
UniRef50_A7BSH7 Cluster: Cytochrome c oxidase aa3, subunit II; n... 46 3e-04
UniRef50_Q8ZXD0 Cluster: Cytochrome c oxidase subunit 2; n=3; Py... 46 3e-04
UniRef50_Q9F3S9 Cluster: Cytochrome c oxidase subunit 2; n=2; Sp... 46 4e-04
UniRef50_Q7NIL9 Cluster: Cytochrome c oxidase subunit 2; n=1; Gl... 45 5e-04
UniRef50_A0JX27 Cluster: Cytochrome c oxidase, subunit II precur... 45 5e-04
UniRef50_Q8YU45 Cluster: Cytochrome c oxidase subunit 2; n=7; Cy... 45 7e-04
UniRef50_Q47R64 Cluster: Cytochrome c oxidase subunit II precurs... 45 7e-04
UniRef50_Q46SU8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ra... 45 7e-04
UniRef50_Q72B26 Cluster: Cytochrome c oxidase subunit 2; n=3; De... 44 0.001
UniRef50_Q93TC7 Cluster: Cytochrome c oxidase subunit II; n=1; C... 44 0.001
UniRef50_A5UVI9 Cluster: Cytochrome c oxidase, subunit II precur... 44 0.001
UniRef50_Q5V5S7 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 44 0.002
UniRef50_A5PDP5 Cluster: Putative cytochrome c oxidase chain II ... 43 0.002
UniRef50_Q81MT9 Cluster: Cytochrome c oxidase subunit 2; n=15; B... 43 0.003
UniRef50_O67934 Cluster: Cytochrome c oxidase subunit 2; n=1; Aq... 43 0.003
UniRef50_Q0LFY7 Cluster: Cytochrome c oxidase, subunit II precur... 43 0.003
UniRef50_A6GFM7 Cluster: Cytochrome c oxidase subunit 2; n=1; Pl... 43 0.003
UniRef50_A6C0L0 Cluster: Cytochrome c oxidase subunit 2; n=1; Pl... 43 0.003
UniRef50_Q06474 Cluster: Cytochrome c oxidase subunit 2 precurso... 43 0.003
UniRef50_P24011 Cluster: Cytochrome c oxidase subunit 2 precurso... 43 0.003
UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5; Alphaprote... 42 0.004
UniRef50_A5NQP7 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 42 0.004
UniRef50_A7D7L0 Cluster: Nitrous-oxide reductase; n=1; Halorubru... 42 0.004
UniRef50_UPI0000164D05 Cluster: cytochrome c oxidase, subunit II... 42 0.005
UniRef50_Q39Z27 Cluster: Cytochrome c oxidase, subunit II precur... 42 0.005
UniRef50_Q9HRJ9 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 42 0.005
UniRef50_Q6KZG1 Cluster: Cytochrome c oxidase polypeptide II; n=... 42 0.005
UniRef50_Q59825 Cluster: Cytochrome oxidase subunit 2; n=4; Sulf... 42 0.005
UniRef50_Q9KEV9 Cluster: Cytochrome c oxidase subunit 2; n=2; Ba... 42 0.006
UniRef50_Q8YYA1 Cluster: Cytochrome c oxidase subunit 2; n=5; No... 42 0.006
UniRef50_Q7NMM6 Cluster: Cytochrome c oxidase subunit 2; n=1; Gl... 42 0.006
UniRef50_A0YDD6 Cluster: Cytochrome c oxidase subunit 2; n=2; Ba... 42 0.006
UniRef50_A0LTG9 Cluster: Cytochrome c oxidase subunit 2; n=1; Ac... 42 0.006
UniRef50_A7HEB6 Cluster: Cytochrome c oxidase subunit II; n=1; A... 41 0.009
UniRef50_A6WD34 Cluster: Cytochrome c oxidase subunit II precurs... 41 0.009
UniRef50_Q1IMA3 Cluster: Cytochrome c oxidase subunit 2; n=2; Ac... 41 0.011
UniRef50_A1G711 Cluster: Cytochrome c oxidase subunit 2; n=2; Sa... 41 0.011
UniRef50_UPI0000510271 Cluster: COG1622: Heme/copper-type cytoch... 40 0.026
UniRef50_Q83GL9 Cluster: Cytochrome c oxidase subunit 2; n=2; Tr... 40 0.026
UniRef50_P98054 Cluster: Cytochrome c oxidase subunit 2 precurso... 39 0.034
UniRef50_P63855 Cluster: Cytochrome c oxidase subunit 2 precurso... 39 0.034
UniRef50_Q3JBQ1 Cluster: Cytochrome c oxidase subunit 2; n=1; Ni... 39 0.046
UniRef50_Q31JY7 Cluster: Cytochrome c oxidase subunit II precurs... 39 0.046
UniRef50_A5CS34 Cluster: Cytochrome c oxidase subunit 2; n=2; Mi... 39 0.046
UniRef50_Q74GM4 Cluster: Cytochrome c oxidase subunit 2; n=2; De... 38 0.060
UniRef50_Q9Z606 Cluster: Quinol oxidase subunit II; n=6; Rhodoba... 38 0.060
UniRef50_Q30I96 Cluster: Cytochrome c oxidase subunit 2; n=3; Me... 38 0.060
UniRef50_Q9YDX7 Cluster: Heme-copper oxidase subunit 2; n=2; Aer... 38 0.060
UniRef50_P98052 Cluster: Cytochrome c oxidase subunit 2 (EC 1.9.... 38 0.080
UniRef50_Q5V2Z8 Cluster: Cytochrome c oxidase subunit II; n=3; H... 38 0.11
UniRef50_Q8EQF5 Cluster: Cytochrome c oxidase (Bo3-type) subunit... 37 0.18
UniRef50_Q2JUD7 Cluster: Cytochrome c oxidase subunit 2; n=2; Sy... 37 0.18
UniRef50_O67936 Cluster: Cytochrome c oxidase subunit II; n=1; A... 37 0.18
UniRef50_P98053 Cluster: Alternative cytochrome c oxidase subuni... 37 0.18
UniRef50_Q46TC8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ra... 36 0.24
UniRef50_Q1J2G4 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 36 0.24
UniRef50_Q6LKC1 Cluster: Hypothetical cytochrome c oxidase subun... 36 0.32
UniRef50_Q01UX9 Cluster: Cytochrome c oxidase subunit 2; n=1; So... 36 0.32
UniRef50_A3I8G1 Cluster: Cytochrome c oxidase (B(O/a)3-type) cha... 36 0.32
UniRef50_Q8XQB8 Cluster: Nitrous-oxide reductase precursor (EC 1... 36 0.32
UniRef50_A5URT9 Cluster: Cytochrome c oxidase, subunit II; n=4; ... 36 0.42
UniRef50_A3ZTG0 Cluster: Cytochrome c oxidase subunit 2; n=1; Bl... 36 0.42
UniRef50_O30093 Cluster: Cytochrome C oxidase, subunit II; n=1; ... 36 0.42
UniRef50_Q4ZGT0 Cluster: Nitrous oxide reductase; n=19; environm... 35 0.56
UniRef50_A0RZ18 Cluster: Heme/copper-type cytochrome/quinol oxid... 35 0.56
UniRef50_Q7VDD7 Cluster: Cytochrome c oxidase subunit 2; n=23; C... 35 0.74
UniRef50_Q35646 Cluster: Cytochrome c oxidase subunit 2; n=1; Pe... 35 0.74
UniRef50_A7D932 Cluster: Ubiquinol oxidase, subunit II; n=4; Pro... 34 0.98
UniRef50_A6FB25 Cluster: Cytochrome C oxidase; n=1; Moritella sp... 34 1.3
UniRef50_A6CA06 Cluster: Cytochrome c oxidase subunit 2; n=1; Pl... 34 1.3
UniRef50_A5GCS3 Cluster: Cytochrome C oxidase subunit II, transm... 33 1.7
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 1.7
UniRef50_Q1ITB3 Cluster: Cytochrome c oxidase, subunit II precur... 33 2.3
UniRef50_Q62JQ5 Cluster: Cytochrome c oxidase family protein; n=... 33 3.0
UniRef50_Q0AI63 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 33 3.0
UniRef50_Q5V4X2 Cluster: Nitrous-oxide reductase; n=1; Haloarcul... 33 3.0
UniRef50_Q6NG98 Cluster: Cytochrome c oxidase subunit 2 precurso... 33 3.0
UniRef50_Q1NHQ5 Cluster: Cytochrome c oxidase subunit 2; n=1; Sp... 32 4.0
UniRef50_A7H6W6 Cluster: Nitrous-oxide reductase precursor; n=7;... 32 4.0
UniRef50_A7D3J6 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 32 4.0
UniRef50_Q1IUK8 Cluster: Cytochrome c oxidase, subunit II precur... 32 5.2
UniRef50_Q1QJV6 Cluster: Cytochrome c oxidase, subunit II; n=1; ... 31 6.9
UniRef50_A6Q5Y5 Cluster: Nitrous-oxide reductase NosZ; n=2; uncl... 31 6.9
UniRef50_A7D124 Cluster: Cytochrome c oxidase, subunit II precur... 31 6.9
UniRef50_A3MXH7 Cluster: Nitrous-oxide reductase precursor; n=1;... 31 6.9
UniRef50_Q6ZXZ8 Cluster: Nitrous oxide reductase precursor; n=13... 31 9.1
UniRef50_A1HRK5 Cluster: Putative uncharacterized protein precur... 31 9.1
UniRef50_Q89AA3 Cluster: Ubiquinol oxidase subunit 2 precursor (... 31 9.1
>UniRef50_P00408 Cluster: Cytochrome c oxidase subunit 2; n=4696;
Metazoa|Rep: Cytochrome c oxidase subunit 2 - Drosophila
melanogaster (Fruit fly)
Length = 228
Score = 151 bits (366), Expect = 5e-36
Identities = 69/100 (69%), Positives = 78/100 (78%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FNNIEFDSY+IP+NE+ + FRLLDVD TA DVIHS T+P+LGVKV
Sbjct: 113 FNNIEFDSYMIPTNELMTDGFRLLDVDNRVVLPMNSQIRILVTAADVIHSWTVPALGVKV 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
D PGRLNQTNFFINRPG+F+GQCSEICGANHSF+PIVIE
Sbjct: 173 DGTPGRLNQTNFFINRPGLFYGQCSEICGANHSFMPIVIE 212
>UniRef50_Q9G839 Cluster: Cytochrome c oxidase subunit 2; n=214;
Mandibulata|Rep: Cytochrome c oxidase subunit 2 -
Hypoderma lineatum (Early cattle grub) (Common cattle
grub)
Length = 226
Score = 149 bits (361), Expect = 2e-35
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F NIEFDSY+IP+N++ N FRLLDVD TA DVIHS TIPSLGVKV
Sbjct: 113 FTNIEFDSYMIPTNDLSMNNFRLLDVDNRVITPMNTQVRLLVTAADVIHSWTIPSLGVKV 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
D PGRLNQTNF INRPG+F+GQCSEICGANHSF+PIVIE
Sbjct: 173 DGTPGRLNQTNFLINRPGLFYGQCSEICGANHSFMPIVIE 212
>UniRef50_Q94RS0 Cluster: Cytochrome c oxidase subunit 2; n=78;
Hexapoda|Rep: Cytochrome c oxidase subunit 2 - Cheilosia
urbana
Length = 227
Score = 148 bits (358), Expect = 5e-35
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F NIEFDSY+IPSNE++ FRLLDVD TA DVIHS TIP+LGVK+
Sbjct: 113 FINIEFDSYMIPSNELEIYNFRLLDVDNRIILPMNHQIRILVTAADVIHSWTIPALGVKI 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
D PGRLNQTNFF+NRPG+FFGQCSEICGANHSF+PIVIE
Sbjct: 173 DGTPGRLNQTNFFMNRPGLFFGQCSEICGANHSFMPIVIE 212
>UniRef50_Q6J977 Cluster: Cytochrome c oxidase subunit 2; n=4;
Endopterygota|Rep: Cytochrome c oxidase subunit 2 -
Danaus plexippus plexippus
Length = 220
Score = 130 bits (313), Expect = 1e-29
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = +1
Query: 25 SYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRL 204
SY+I + I N FRLLDVD TATDVIHS TIP+LG+KVDANPGRL
Sbjct: 120 SYMIQPSNINN--FRLLDVDNRIILPMNNQIRILVTATDVIHSWTIPALGIKVDANPGRL 177
Query: 205 NQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
NQ +FFINRPGIFFGQCSEICGANHSF+PIVIE
Sbjct: 178 NQMSFFINRPGIFFGQCSEICGANHSFMPIVIE 210
>UniRef50_Q6J979 Cluster: Cytochrome c oxidase subunit 2; n=4;
Obtectomera|Rep: Cytochrome c oxidase subunit 2 - Danaus
plexippus plexippus
Length = 221
Score = 127 bits (307), Expect = 8e-29
Identities = 60/82 (73%), Positives = 64/82 (78%)
Frame = +1
Query: 58 NEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPG 237
N FRLLDVD TATDVIHS TIP+LG+KVDANPGRLNQ +FFINRPG
Sbjct: 130 NNFRLLDVDNRIILPMNNQIRILVTATDVIHSWTIPALGIKVDANPGRLNQMSFFINRPG 189
Query: 238 IFFGQCSEICGANHSFIPIVIE 303
IFFGQCSEICGANHSF+PIVIE
Sbjct: 190 IFFGQCSEICGANHSFMPIVIE 211
>UniRef50_Q37545 Cluster: Cytochrome c oxidase subunit 2; n=58;
root|Rep: Cytochrome c oxidase subunit 2 - Lumbricus
terrestris (Common earthworm)
Length = 228
Score = 122 bits (295), Expect = 2e-27
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F N+E DSY++P++++ ++RLL+VD TA DVIHS T+P+LGVKV
Sbjct: 113 FLNVEMDSYMLPTSDLLPGDYRLLEVDNRMVVPMQLEIRMLITAADVIHSWTVPALGVKV 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLNQ F +PG+F+GQCSEICGANHSF+PI +E
Sbjct: 173 DAVPGRLNQIGFTTTQPGVFYGQCSEICGANHSFMPIAVE 212
>UniRef50_Q9XMZ4 Cluster: Cytochrome c oxidase subunit 2; n=16;
Neoptera|Rep: Cytochrome c oxidase subunit 2 - Stomaphis
pini
Length = 220
Score = 119 bits (286), Expect = 3e-26
Identities = 57/100 (57%), Positives = 68/100 (68%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F NIEF+S +I N FRL++VD ++ DVIHS TIPSL +K+
Sbjct: 113 FLNIEFESXMI--NNFNKENFRLIEVDNKTILPFNFNIRLLISSEDVIHSWTIPSLAIKI 170
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGR+NQTN F+NRPGIFFGQCSEICG NHSF+PI IE
Sbjct: 171 DAIPGRINQTNLFLNRPGIFFGQCSEICGINHSFMPIQIE 210
>UniRef50_P00405 Cluster: Cytochrome c oxidase subunit 2; n=1386;
Coelomata|Rep: Cytochrome c oxidase subunit 2 - Mus
musculus (Mouse)
Length = 227
Score = 118 bits (283), Expect = 6e-26
Identities = 52/100 (52%), Positives = 70/100 (70%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ ++ FDSY+IP+N++K E RLL+VD ++ DV+HS +PSLG+K
Sbjct: 113 YEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKT 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLNQ NRPG+F+GQCSEICG+NHSF+PIV+E
Sbjct: 173 DAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLE 212
>UniRef50_Q9TAK4 Cluster: Cytochrome c oxidase subunit 2; n=5;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Cafeteria roenbergensis
Length = 285
Score = 116 bits (278), Expect = 2e-25
Identities = 52/96 (54%), Positives = 67/96 (69%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
I +DSY+I +++ + E RLL+VD T+ DVIHS +PSLGVK+DA
Sbjct: 157 ITYDSYMISNDDAVSREQRLLEVDNKLYLPVETNVRLLVTSADVIHSWAVPSLGVKIDAC 216
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
PGRLNQT+ F+ RPGIF+GQCSEICG NH F+PIV+
Sbjct: 217 PGRLNQTSIFVKRPGIFYGQCSEICGVNHGFMPIVV 252
>UniRef50_Q02212 Cluster: Cytochrome c oxidase subunit 2; n=779;
root|Rep: Cytochrome c oxidase subunit 2 - Phytophthora
megasperma (Potato pink rot fungus)
Length = 266
Score = 116 bits (278), Expect = 2e-25
Identities = 51/95 (53%), Positives = 67/95 (70%)
Frame = +1
Query: 19 FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
FDSY+I +++ +FR+L+VD TA+DV+HS IPSLG+K+DA PG
Sbjct: 143 FDSYMIQEDDLAIGQFRILEVDNRVVVPTNSHIRVLITASDVLHSWAIPSLGIKLDACPG 202
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
RLNQT+ FI R G+F+GQCSEICG NH F+PIV+E
Sbjct: 203 RLNQTSMFIKREGVFYGQCSEICGVNHGFMPIVVE 237
>UniRef50_Q8SHP9 Cluster: Cytochrome c oxidase subunit 2; n=83;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Trichoderma reesei (Hypocrea jecorina)
Length = 540
Score = 114 bits (275), Expect = 6e-25
Identities = 52/97 (53%), Positives = 66/97 (68%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
IEFDSYI+P ++++ R+L+VD T+ DVIHS +PSLG+K DA
Sbjct: 430 IEFDSYIVPDSDLEEGGLRMLEVDNRVIVPELTHIRFVVTSGDVIHSFAVPSLGIKTDAY 489
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + FINR G+F+GQCSEICG HS +PIVIE
Sbjct: 490 PGRLNQVSIFINREGVFYGQCSEICGILHSSMPIVIE 526
>UniRef50_P48889 Cluster: Cytochrome c oxidase subunit 2; n=232;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Albinaria coerulea (Land snail)
Length = 224
Score = 114 bits (275), Expect = 6e-25
Identities = 51/99 (51%), Positives = 66/99 (66%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
N FDSY+IP ++K ++RLL+VD T+ DVIH+ +PS+GVK+D
Sbjct: 114 NISNFDSYMIPEEDLKPGDYRLLEVDNRPMVPYGLDINVITTSADVIHAWALPSMGVKMD 173
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGRLN F N PGI++GQCSEICGANHSF+PI +E
Sbjct: 174 AVPGRLNSMGFHANLPGIYYGQCSEICGANHSFMPITVE 212
>UniRef50_Q9MGB5 Cluster: Cytochrome c oxidase subunit 2; n=91;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Chrysodidymus synuroideus
Length = 273
Score = 113 bits (271), Expect = 2e-24
Identities = 51/98 (52%), Positives = 65/98 (66%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
+I FDSY++ SN++ FRLL+VD TA DVIH T+PS GVKVDA
Sbjct: 158 SINFDSYMVSSNDLIKGGFRLLEVDNRVILPVLTHIRLLITAADVIHCWTVPSFGVKVDA 217
Query: 190 NPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRL+Q + FI R G++FGQCSEICG NH F+PI ++
Sbjct: 218 CPGRLSQASLFIKREGLYFGQCSEICGVNHGFMPIAVK 255
>UniRef50_P05490 Cluster: Cytochrome c oxidase subunit 2; n=31;
Magnoliophyta|Rep: Cytochrome c oxidase subunit 2 -
Oenothera bertiana (Bertero's evening primrose)
Length = 258
Score = 111 bits (266), Expect = 7e-24
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
++ FDSY+IP ++++ + RLL+VD T+ DV+HS +PSLGVK DA
Sbjct: 141 SLTFDSYMIPEDDLELGQLRLLEVDNRVVVPVKTNLRLIVTSADVLHSWAVPSLGVKCDA 200
Query: 190 NPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + + R G+++GQCSEICG NH+F+PIVIE
Sbjct: 201 VPGRLNQISMLVQREGVYYGQCSEICGTNHAFMPIVIE 238
>UniRef50_Q9TA26 Cluster: Cytochrome c oxidase subunit 2; n=147;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Loxodonta africana (African elephant)
Length = 228
Score = 111 bits (266), Expect = 7e-24
Identities = 50/100 (50%), Positives = 67/100 (67%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ ++ FDSY+I ++ +K E RLL+VD ++ DV+HS +PSLG+K
Sbjct: 113 YEDLAFDSYMITTDSLKFGELRLLEVDNRMVLPTDLPVRVLVSSEDVLHSWAVPSLGLKT 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLNQ RPG+F+GQCSEICGANHSF+PIV+E
Sbjct: 173 DAIPGRLNQVTLTSMRPGLFYGQCSEICGANHSFMPIVLE 212
>UniRef50_P00403 Cluster: Cytochrome c oxidase subunit 2; n=3453;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 - Homo
sapiens (Human)
Length = 227
Score = 111 bits (266), Expect = 7e-24
Identities = 49/100 (49%), Positives = 67/100 (67%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ + F+SY++P ++ + RLLDVD T+ DV+HS +P+LG+K
Sbjct: 113 YGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPIEAPIRMMITSQDVLHSWAVPTLGLKT 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLNQT F RPG+++GQCSEICGANHSF+PIV+E
Sbjct: 173 DAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLE 212
>UniRef50_Q5P9Z0 Cluster: Cytochrome c oxidase subunit 2; n=7;
Rickettsiales|Rep: Cytochrome c oxidase subunit 2 -
Anaplasma marginale (strain St. Maries)
Length = 276
Score = 108 bits (260), Expect = 4e-23
Identities = 47/97 (48%), Positives = 66/97 (68%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
I FDSY+ P +E+++ E RLL+VD TA DVIHS +P+LG+KVDA
Sbjct: 162 IRFDSYMKPDSELESGELRLLEVDNRMVVPVGEVVLLQSTAGDVIHSWAVPALGIKVDAV 221
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PG+LN+ F + +PG+++GQCSE+CG H F+PIV+E
Sbjct: 222 PGKLNEVWFSVKKPGVYYGQCSELCGRLHGFMPIVVE 258
>UniRef50_Q8HIN6 Cluster: Cytochrome c oxidase subunit 2; n=4;
Ascidiacea|Rep: Cytochrome c oxidase subunit 2 - Ciona
intestinalis (Transparent sea squirt)
Length = 229
Score = 108 bits (260), Expect = 4e-23
Identities = 50/100 (50%), Positives = 66/100 (66%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FN+ + SY++PS +++ +FRLL+VD T+ DVIHS T+PSL +KV
Sbjct: 113 FNDFDMSSYMVPSEDLQEGQFRLLEVDNSMVLPYSTNIRLMITSYDVIHSWTLPSLKMKV 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLN N F +PG F+GQCSEICG HSF+PI +E
Sbjct: 173 DAVPGRLNTMNIFSFQPGSFYGQCSEICGLLHSFMPIHVE 212
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 108 bits (260), Expect = 4e-23
Identities = 50/97 (51%), Positives = 64/97 (65%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+EFDSY++P ++++ R+L+VD TA DVIHS IP+LGVK DA
Sbjct: 679 VEFDSYLVPESDLEEGALRMLEVDNRVILPEITHTRFILTAADVIHSFAIPALGVKCDAY 738
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + INR G F+GQCSEICG HS +PIV+E
Sbjct: 739 PGRLNQFSVLINRLGTFYGQCSEICGILHSSMPIVVE 775
>UniRef50_P20387 Cluster: Cytochrome c oxidase subunit 2 precursor;
n=239; Fungi/Metazoa group|Rep: Cytochrome c oxidase
subunit 2 precursor - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 247
Score = 108 bits (260), Expect = 4e-23
Identities = 48/97 (49%), Positives = 64/97 (65%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+EF+SY+IP + +++ + RLLD D TA DVIH +PSLG+K+DA
Sbjct: 137 VEFESYVIPEDLLEDGQLRLLDTDTSVVVPVDTHIRFVVTAADVIHDFAVPSLGIKIDAA 196
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + I R G+F+GQCSEICG +HS +PI IE
Sbjct: 197 PGRLNQVSALIQREGVFYGQCSEICGQSHSAMPIKIE 233
>UniRef50_Q9AQY5 Cluster: Cytochrome c oxidase subunit 2; n=6;
Chlamydomonadaceae|Rep: Cytochrome c oxidase subunit 2 -
Polytomella sp. Pringsheim 198.80
Length = 153
Score = 107 bits (258), Expect = 7e-23
Identities = 50/95 (52%), Positives = 66/95 (69%)
Frame = +1
Query: 19 FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
FDSY++ +++ + R+L+VD TA+DVIHS +PSLG+K+DA PG
Sbjct: 44 FDSYMV--TDVQPGQLRMLEVDERLVLPTNTLVRLLVTASDVIHSWAVPSLGIKMDAIPG 101
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
RLNQ INR G+F+GQCSEICGANHSF+PIV+E
Sbjct: 102 RLNQIWLTINREGVFYGQCSEICGANHSFMPIVVE 136
>UniRef50_Q2HJL3 Cluster: Cytochrome c oxidase subunit 2; n=10;
Protostomia|Rep: Cytochrome c oxidase subunit 2 -
Campanulotes bidentatus compar (small pigeon louse)
Length = 241
Score = 106 bits (255), Expect = 2e-22
Identities = 49/95 (51%), Positives = 66/95 (69%)
Frame = +1
Query: 19 FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
FDSY+IP+ ++ +FRLL+VD T++DVIHS T+P LGVKVDA PG
Sbjct: 133 FDSYMIPTCDLLKGDFRLLEVDKSVKVPLNSESRVFVTSSDVIHSWTVPCLGVKVDAIPG 192
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
RLNQ + + +R G+ +GQCSEICG+ HSF+PI +E
Sbjct: 193 RLNQLSLYPSRVGLAYGQCSEICGSMHSFMPICLE 227
>UniRef50_Q6Y409 Cluster: Cytochrome c oxidase subunit 2; n=2;
Coelomata|Rep: Cytochrome c oxidase subunit 2 - Ophiura
lutkeni
Length = 237
Score = 105 bits (253), Expect = 3e-22
Identities = 52/99 (52%), Positives = 66/99 (66%), Gaps = 1/99 (1%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEF-RLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
N IEFDSY+I + + RLL+VD +TDVIH+ ++P LG+K+
Sbjct: 114 NRIEFDSYMIHLEDFQQEGLPRLLEVDNRLVLPYNTDIRVITYSTDVIHAWSVPQLGLKM 173
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
DA PGRLNQ I+RPGIF+GQCSEICGANHSF+PIV+
Sbjct: 174 DAVPGRLNQMFVKIDRPGIFYGQCSEICGANHSFMPIVV 212
>UniRef50_Q9B8A2 Cluster: Cytochrome c oxidase subunit 2; n=2;
Bilateria|Rep: Cytochrome c oxidase subunit 2 -
Trichinella spiralis (Trichina worm)
Length = 225
Score = 104 bits (250), Expect = 6e-22
Identities = 50/98 (51%), Positives = 63/98 (64%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
N+EFDSY+ E ++ +FRLLD D T+ DVIHS TIPSLG+K+DA
Sbjct: 114 NLEFDSYM---KEWESQDFRLLDCDNRVVLPTQVPIRMSVTSADVIHSWTIPSLGIKMDA 170
Query: 190 NPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGR+N T PG+ +GQCSE+CG NHSF+PI IE
Sbjct: 171 MPGRINSTTTESTLPGVIYGQCSELCGVNHSFMPITIE 208
>UniRef50_P00410 Cluster: Cytochrome c oxidase subunit 2 precursor;
n=745; Eukaryota|Rep: Cytochrome c oxidase subunit 2
precursor - Saccharomyces cerevisiae (Baker's yeast)
Length = 251
Score = 104 bits (250), Expect = 6e-22
Identities = 47/97 (48%), Positives = 60/97 (61%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+EF+SY+IP ++ + RLLD D TA DVIH IPSLG+KVDA
Sbjct: 141 VEFESYVIPDELLEEGQLRLLDTDTSMVVPVDTHIRFVVTAADVIHDFAIPSLGIKVDAT 200
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + I R G+F+G CSE+CG H+ +PI IE
Sbjct: 201 PGRLNQVSALIQREGVFYGACSELCGTGHANMPIKIE 237
>UniRef50_Q2TUA5 Cluster: Cytochrome c oxidase subunit 2; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 - Dictyota
dichotoma
Length = 294
Score = 103 bits (247), Expect = 1e-21
Identities = 52/108 (48%), Positives = 66/108 (61%), Gaps = 10/108 (9%)
Frame = +1
Query: 10 NIEFDSYIIPSNEI---------KNNE-FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*T 159
+I FDSY+IP ++ K + FRLL+VD T DV+HS
Sbjct: 169 SINFDSYLIPEEDLIIPKPYSTGKGGKVFRLLEVDNRVVLPVNTHVRVLVTGADVLHSWA 228
Query: 160 IPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
+PSLGVKVD+ PGRLN N FI R G+F+GQCSEICG NH F+PIV++
Sbjct: 229 VPSLGVKVDSCPGRLNLINIFIKREGVFYGQCSEICGVNHGFMPIVVQ 276
>UniRef50_Q6E0W2 Cluster: Cytochrome c oxidase subunit 2; n=59;
Coelomata|Rep: Cytochrome c oxidase subunit 2 -
Paraspadella gotoi
Length = 223
Score = 103 bits (247), Expect = 1e-21
Identities = 51/96 (53%), Positives = 63/96 (65%)
Frame = +1
Query: 16 EFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANP 195
EFD+Y++ KN+ RLL D +A DV+HS TIPSLG+K DA P
Sbjct: 121 EFDAYMV-----KNSNPRLLMSDNRTILPYMTPVRVLISAADVLHSWTIPSLGIKADAVP 175
Query: 196 GRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
GRLNQ F +RPGIF+GQCSEICG+NHSF+PI +E
Sbjct: 176 GRLNQLTLFASRPGIFYGQCSEICGSNHSFMPITME 211
>UniRef50_Q4ULU3 Cluster: Probable cytochrome c oxidase subunit 2;
n=13; cellular organisms|Rep: Probable cytochrome c
oxidase subunit 2 - Rickettsia felis (Rickettsia azadi)
Length = 315
Score = 103 bits (246), Expect = 2e-21
Identities = 47/99 (47%), Positives = 64/99 (64%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
+N+EFDS +I +K ++ RLLDVD TA DVIHS +PSLG K+D
Sbjct: 188 DNLEFDSVMISDENLKPDQKRLLDVDNRIVIPENATVRFLITAGDVIHSFAVPSLGFKID 247
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGR+N+T + + G+++GQCSE+CG NH F+PI IE
Sbjct: 248 AVPGRINETWTRVAKKGVYYGQCSELCGINHGFMPIAIE 286
>UniRef50_Q8LWY7 Cluster: Cytochrome c oxidase subunit 2; n=13;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 - Laminaria
digitata
Length = 1280
Score = 101 bits (241), Expect = 8e-21
Identities = 51/107 (47%), Positives = 65/107 (60%), Gaps = 10/107 (9%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNE----------FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TI 162
I FDSY+I +++ E FRLL+VD T+ DV+HS +
Sbjct: 1157 INFDSYLITDDDLVIPEVSGSGKAGKVFRLLEVDNRLVVPTNTHIRVLVTSADVLHSWAV 1216
Query: 163 PSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PSLGVKVDA PGRLNQ FI R G+F+GQCSE+CG NH F+PIV++
Sbjct: 1217 PSLGVKVDACPGRLNQVFLFIKREGVFYGQCSELCGVNHGFMPIVVQ 1263
>UniRef50_Q9T7K8 Cluster: Cytochrome c oxidase subunit 2; n=2;
Crassostrea|Rep: Cytochrome c oxidase subunit 2 -
Crassostrea gigas (Pacific oyster) (Crassostrea
angulata)
Length = 233
Score = 101 bits (241), Expect = 8e-21
Identities = 46/100 (46%), Positives = 66/100 (66%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F + ++SY++P +E+K E RLL VD T+ DV+HS T+P+ GVK
Sbjct: 113 FAVVSYNSYMVPEDELKLGEPRLLTVDKSMVLPFSVWCRILTTSFDVVHSWTVPAFGVKS 172
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRL++++ + PG+F+GQCSEICGA HSF+PI +E
Sbjct: 173 DAVPGRLSESSVKVEMPGVFWGQCSEICGALHSFMPIRVE 212
>UniRef50_Q94YZ5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Pylaiella littoralis|Rep: Cytochrome c oxidase subunit 2
- Pylaiella littoralis
Length = 1282
Score = 100 bits (239), Expect = 1e-20
Identities = 50/107 (46%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNE----------FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TI 162
I FDSY+I ++ E FRLL+VD T+ DV+HS +
Sbjct: 1159 INFDSYLIADEDLVIPEASGTGKAGKVFRLLEVDNRLFVPTNTHIRLLVTSADVLHSWAV 1218
Query: 163 PSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PSLGVKVDA PGRLNQ F+ R G+F+GQCSE+CG NH F+PIV++
Sbjct: 1219 PSLGVKVDACPGRLNQVFIFVKREGVFYGQCSELCGVNHGFMPIVVQ 1265
>UniRef50_Q2TUE5 Cluster: Cytochrome c oxidase subunit 2; n=117;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Desmarestia viridis
Length = 1296
Score = 100 bits (239), Expect = 1e-20
Identities = 51/107 (47%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNE----------FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TI 162
I FDSY+I ++ E FRLL+VD T+ DV+HS +
Sbjct: 1173 INFDSYLIAEEDLIIPEASGTGKAGKVFRLLEVDNRLLVPTNTHIRVLVTSADVLHSWAV 1232
Query: 163 PSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PSLGVKVDA PGRLNQ FI R G+F+GQCSE+CG NH F+PIV++
Sbjct: 1233 PSLGVKVDACPGRLNQVFLFIKREGVFYGQCSELCGVNHGFMPIVVQ 1279
>UniRef50_Q2TUI7 Cluster: Cytochrome c oxidase subunit 2; n=2; Fucus
vesiculosus|Rep: Cytochrome c oxidase subunit 2 - Fucus
vesiculosus (Bladder wrack)
Length = 1051
Score = 99 bits (238), Expect = 2e-20
Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 10/107 (9%)
Frame = +1
Query: 13 IEFDSYIIPSNEI----------KNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TI 162
I FDSY+I +++ FRLL+VD T+ DV+HS +
Sbjct: 928 INFDSYLIADDDLVIPSAHSTGKAGKVFRLLEVDNRLFVPTNTHIRVLVTSADVLHSWAV 987
Query: 163 PSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PSLG+KVDA PGRLNQ F+ R G+F+GQCSE+CG NH F+PIV++
Sbjct: 988 PSLGIKVDACPGRLNQVFLFVKREGVFYGQCSELCGVNHGFMPIVVQ 1034
>UniRef50_P21534 Cluster: Cytochrome c oxidase subunit 2; n=88;
Eukaryota|Rep: Cytochrome c oxidase subunit 2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 248
Score = 99 bits (238), Expect = 2e-20
Identities = 43/97 (44%), Positives = 61/97 (62%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+ FDSY++P +++ R L+VD T+ DVIHS +PSLG+K D
Sbjct: 137 VSFDSYMVPEEDLEEGSLRQLEVDNRLVLPIDTRIRLILTSGDVIHSWAVPSLGIKCDCI 196
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + I+R G+F+GQCSE+CG HS +PIV++
Sbjct: 197 PGRLNQVSLSIDREGLFYGQCSELCGVLHSSMPIVVQ 233
>UniRef50_Q4L1C0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Lepeophtheirus salmonis|Rep: Cytochrome c oxidase
subunit 2 - Lepeophtheirus salmonis (salmon louse)
Length = 229
Score = 98.7 bits (235), Expect = 4e-20
Identities = 42/94 (44%), Positives = 64/94 (68%)
Frame = +1
Query: 22 DSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGR 201
D +++PS++ K + RLL+ D ++ DV+H+ +PSLGVK+DA PGR
Sbjct: 119 DCFMVPSSDTKLGQMRLLESDVALTLPIKSMLQLMVSSKDVLHAWAVPSLGVKMDAVPGR 178
Query: 202 LNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
+N + + RPG++FGQCSEICGA+HSF+PI++E
Sbjct: 179 INTLSMYSFRPGLYFGQCSEICGAHHSFMPILLE 212
>UniRef50_Q94XD9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Thrips imaginis|Rep: Cytochrome c oxidase subunit 2 -
Thrips imaginis (Plague thrips)
Length = 222
Score = 97.5 bits (232), Expect = 9e-20
Identities = 47/100 (47%), Positives = 61/100 (61%), Gaps = 5/100 (5%)
Frame = +1
Query: 19 FDSYIIPSNEIK-----NNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ SY+IP NE+ N +RLL D T+ DVIHS +IP +G+KV
Sbjct: 121 YSSYMIPDNELLKGKPCNMGWRLLQTDTRLTVPYGTEVQCLTTSLDVIHSFSIPEMGIKV 180
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLN NF +PGI++GQC+EICG HSF+PI +E
Sbjct: 181 DAIPGRLNSVNFKTTKPGIYYGQCAEICGTGHSFMPICME 220
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 97.1 bits (231), Expect = 1e-19
Identities = 49/87 (56%), Positives = 62/87 (71%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F N+EFDSY+I +N++ N FRLL+VD +++DVIHS T+PS GVKV
Sbjct: 105 FKNLEFDSYLINNNQLFN--FRLLEVDNRTILPYLSHIRILTSSSDVIHSWTVPSTGVKV 162
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEI 264
DA+PGRLNQ +F +N PGIFFGQCSEI
Sbjct: 163 DASPGRLNQLSFNLN-PGIFFGQCSEI 188
>UniRef50_Q697G5 Cluster: Cytochrome c oxidase subunit 2; n=29;
Neoptera|Rep: Cytochrome c oxidase subunit 2 -
Neomaskellia andropogonis
Length = 238
Score = 96.7 bits (230), Expect = 2e-19
Identities = 49/100 (49%), Positives = 64/100 (64%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F ++ FDSY+I N R L+VD T++DV+HS +PSLGVKV
Sbjct: 113 FMDLGFDSYMII------NLARFLEVDNCLVLPFLVKIRLLVTSSDVLHSWAVPSLGVKV 166
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLNQ + + R G F+GQCSEICGANHS++PIV++
Sbjct: 167 DAVPGRLNQASLMMTRLGKFYGQCSEICGANHSYMPIVVD 206
>UniRef50_Q9TAP1 Cluster: Cytochrome c oxidase subunit 2; n=12;
Alveolata|Rep: Cytochrome c oxidase subunit 2 -
Toxoplasma gondii
Length = 318
Score = 95.9 bits (228), Expect = 3e-19
Identities = 45/95 (47%), Positives = 58/95 (61%)
Frame = +1
Query: 19 FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
F S ++ ++ R L+VD TATDVIHS +P+LG+K DA PG
Sbjct: 62 FQSNMVTDEDLLPGMLRNLEVDKRLTLPTRTHIRFLITATDVIHSWAVPALGIKADAIPG 121
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
RL + N FI R G+F+GQCSE+CGA H F+PIVIE
Sbjct: 122 RLQRINTFIQREGVFYGQCSELCGALHGFMPIVIE 156
>UniRef50_Q73I77 Cluster: Cytochrome c oxidase subunit 2; n=4;
Wolbachia|Rep: Cytochrome c oxidase subunit 2 -
Wolbachia pipientis wMel
Length = 254
Score = 95.5 bits (227), Expect = 4e-19
Identities = 42/100 (42%), Positives = 58/100 (58%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ + FDSYI + + +L VD TA DVIHS +P+ GVK+
Sbjct: 137 YQGVSFDSYIKGKEDFIEGDLKLFSVDNNIILPVNTNVRLQVTAGDVIHSWGVPAFGVKI 196
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRLN+ F I +PG+++GQC E+CG H F+PIV+E
Sbjct: 197 DAIPGRLNEAWFNIKKPGVYYGQCYELCGQGHGFMPIVVE 236
>UniRef50_Q94QP4 Cluster: Cytochrome c oxidase subunit 2; n=2;
Unionidae|Rep: Cytochrome c oxidase subunit 2 -
Inversidens japanensis
Length = 283
Score = 95.1 bits (226), Expect = 5e-19
Identities = 43/99 (43%), Positives = 61/99 (61%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
++ +DSY+IP + ++ +RLL+VD T+ DVIHS IPS +KVD
Sbjct: 116 SSYSYDSYLIPDSAMEEG-YRLLEVDNRCVVPTLLTIRGLVTSDDVIHSWAIPSSAIKVD 174
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGR+NQ + G+F+GQCSE+CG NHSF+PI +E
Sbjct: 175 GVPGRINQVSLCFINSGVFYGQCSELCGVNHSFMPICVE 213
>UniRef50_Q2W5A1 Cluster: Cytochrome c oxidase subunit 2; n=3;
Magnetospirillum|Rep: Cytochrome c oxidase subunit 2 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 293
Score = 93.1 bits (221), Expect = 2e-18
Identities = 39/99 (39%), Positives = 62/99 (62%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
++ +FDS ++ + ++K + RLL D TA DVIHS ++P+ G+K D
Sbjct: 155 HDFKFDSNMVQAEDLKPGQPRLLTADNTLVVPAGVPIRLQMTADDVIHSWSVPAFGIKTD 214
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGRLN+T +N PG ++GQCS++CG NH F+P+ ++
Sbjct: 215 AVPGRLNETWVQVNEPGTYYGQCSQLCGVNHGFMPVHVK 253
>UniRef50_Q9T6M4 Cluster: Cytochrome c oxidase subunit 2; n=7;
Chromadorea|Rep: Cytochrome c oxidase subunit 2 -
Globodera pallida
Length = 237
Score = 92.3 bits (219), Expect = 3e-18
Identities = 44/97 (45%), Positives = 59/97 (60%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+ FDSY++ + +FRLL+VD T++DVIHS +P +KVD
Sbjct: 118 LSFDSYMVFEDSFFLGDFRLLEVDNRLVLPQGVFCRFVLTSSDVIHSWALPVFFLKVDVM 177
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
G LN NF + G+FFGQCSEICGANHSF+P+V+E
Sbjct: 178 SGLLNILNFNFDLVGVFFGQCSEICGANHSFMPVVLE 214
>UniRef50_Q15K52 Cluster: Cytochrome c oxidase subunit 2; n=1;
Flustrellidra hispida|Rep: Cytochrome c oxidase subunit
2 - Flustrellidra hispida
Length = 222
Score = 92.3 bits (219), Expect = 3e-18
Identities = 48/98 (48%), Positives = 61/98 (62%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
+++FDSY+ SN +N +RLLD D T DVIHS ++P L VK DA
Sbjct: 111 DMDFDSYM--SN---SNGYRLLDTDHRLVLPVMVNVRGLVTGGDVIHSWSVPVLAVKADA 165
Query: 190 NPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
PGRLNQ + F G+ +GQCSEICGANHSF+PI +E
Sbjct: 166 VPGRLNQLSMFSMNVGVAYGQCSEICGANHSFMPISVE 203
>UniRef50_A2T4Y2 Cluster: Cytochrome c oxidase subunit 2; n=13;
Tigriopus|Rep: Cytochrome c oxidase subunit 2 -
Tigriopus californicus (Marine copepod)
Length = 227
Score = 92.3 bits (219), Expect = 3e-18
Identities = 46/93 (49%), Positives = 57/93 (61%)
Frame = +1
Query: 22 DSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGR 201
D Y++P + RLL D T DVIHS T+PSLG+K DA PGR
Sbjct: 122 DCYMLPREDAFG--MRLLLTDEFLMLPINVPVRILVTNXDVIHSWTLPSLGIKGDAVPGR 179
Query: 202 LNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
LNQ N +NR +F+GQCSEICGANHSF+PI++
Sbjct: 180 LNQLNLTLNRKAMFYGQCSEICGANHSFMPIML 212
>UniRef50_Q5DNB5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Leptorhynchoides thecatus|Rep: Cytochrome c oxidase
subunit 2 - Leptorhynchoides thecatus
Length = 215
Score = 91.9 bits (218), Expect = 5e-18
Identities = 48/95 (50%), Positives = 60/95 (63%)
Frame = +1
Query: 19 FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
FDSY+ S+ FR+LDVD T++DVIHS +PSLG KVD PG
Sbjct: 116 FDSYMSLSDG-----FRVLDVDNRLILPIDINVSVLLTSSDVIHSWAVPSLGFKVDCVPG 170
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
RLN F I + G+++GQCSE+CGA HSF+PIVIE
Sbjct: 171 RLNHLFFSIVKCGVYYGQCSELCGAMHSFMPIVIE 205
>UniRef50_Q2I6Y9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Lottia digitalis|Rep: Cytochrome c oxidase subunit 2 -
Lottia digitalis (California fingered limpet)
Length = 239
Score = 90.2 bits (214), Expect = 1e-17
Identities = 43/99 (43%), Positives = 58/99 (58%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
N+ FDSY++ ++K + R L VD T+ DVIHS +PSLG+K D
Sbjct: 122 NSFSFDSYMLRDPDLKLGQPRTLTVDKPMVLPYGVPVRVLTTSADVIHSWAVPSLGLKAD 181
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGRLNQ +PG+ +G CSEICG H+++PI IE
Sbjct: 182 ALPGRLNQVVMCALKPGVVWGMCSEICGDGHAYMPIEIE 220
>UniRef50_Q0QJ97 Cluster: Cytochrome c oxidase subunit 2; n=1; Xenos
vesparum|Rep: Cytochrome c oxidase subunit 2 - Xenos
vesparum
Length = 221
Score = 89.8 bits (213), Expect = 2e-17
Identities = 42/79 (53%), Positives = 52/79 (65%)
Frame = +1
Query: 67 RLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFF 246
+ L+VD ++TDVIHS +I SLGVK+DA PG LNQ N I RPG F+
Sbjct: 131 KFLEVDNKLILPYKIMIRFLTSSTDVIHSWSIQSLGVKMDAIPGHLNQMNLIIERPGNFY 190
Query: 247 GQCSEICGANHSFIPIVIE 303
GQCSEICG NHS++PI +E
Sbjct: 191 GQCSEICGINHSYMPICME 209
>UniRef50_Q8HN46 Cluster: Cytochrome c oxidase subunit 2; n=5;
Onchocercidae|Rep: Cytochrome c oxidase subunit 2 -
Brugia malayi (Filarial nematode worm)
Length = 232
Score = 89.4 bits (212), Expect = 2e-17
Identities = 42/99 (42%), Positives = 61/99 (61%)
Frame = +1
Query: 7 NNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
+++ FDS++ P +++ +FRL DVD T++DVIHS +P VK+D
Sbjct: 117 SSLVFDSFMKPVDDLSLGDFRLFDVDNRCVLPIGVNIGLYCTSSDVIHSFAVPKCFVKMD 176
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A G L + F + G+F+GQCSEICGANHSF+PI +E
Sbjct: 177 ALNGLLTKITFNFSCCGLFYGQCSEICGANHSFMPIALE 215
>UniRef50_Q9G8P0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 2 -
Naegleria gruberi
Length = 281
Score = 88.6 bits (210), Expect = 4e-17
Identities = 43/100 (43%), Positives = 63/100 (63%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F ++FDSY++ +E KN RLL+VD T+ DVIHS +P LG+K+
Sbjct: 145 FPILQFDSYMVKDSE-KN---RLLNVDKCLVLPNGHNICFYITSHDVIHSWAVPQLGIKI 200
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGRL + + + G+++GQCSE+CG NH+F+PI +E
Sbjct: 201 DALPGRLMRFVLYSSIEGVYYGQCSELCGVNHAFMPICVE 240
>UniRef50_A5YPB3 Cluster: Cytochrome c oxidase subunit 2; n=2;
Tettigoniinae|Rep: Cytochrome c oxidase subunit 2 -
Paratlanticus ussuriensis
Length = 179
Score = 87.8 bits (208), Expect = 8e-17
Identities = 42/73 (57%), Positives = 49/73 (67%)
Frame = +1
Query: 16 EFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANP 195
EFDSY++P +E N FRLLDVD TA DV+HS TIP+LGV VDA P
Sbjct: 107 EFDSYMLPYDEAPENGFRLLDVDNRTILPMNTPIRMLVTAADVLHSWTIPALGVSVDATP 166
Query: 196 GRLNQTNFFINRP 234
GRLNQT+FF+NRP
Sbjct: 167 GRLNQTSFFMNRP 179
>UniRef50_Q64LH9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Paratomella rubra|Rep: Cytochrome c oxidase subunit 2 -
Paratomella rubra
Length = 220
Score = 87.0 bits (206), Expect = 1e-16
Identities = 44/96 (45%), Positives = 58/96 (60%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+E DSY+I NE K RLL +++DV+H T+PSLG+K+DA
Sbjct: 116 LEIDSYMIFGNEDK---VRLLSSTSSLVLPVGDMVRLMVSSSDVLHCFTVPSLGLKIDAI 172
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
PGR+NQ F G+FFGQCSE+CGA HSF+PI +
Sbjct: 173 PGRVNQVVFSSLSEGVFFGQCSELCGAQHSFMPIEV 208
>UniRef50_Q3C2K4 Cluster: Cytochrome c oxidase subunit 2; n=3;
Leptotrombidium|Rep: Cytochrome c oxidase subunit 2 -
Leptotrombidium deliense
Length = 216
Score = 87.0 bits (206), Expect = 1e-16
Identities = 41/82 (50%), Positives = 50/82 (60%)
Frame = +1
Query: 49 IKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFIN 228
++ +FRLL ++TDVIHS T+PSLGVK DA PGR+NQ F
Sbjct: 120 LEKGDFRLLSTSNFLYLPFKENIRVLISSTDVIHSWTLPSLGVKADAVPGRMNQLFFLSQ 179
Query: 229 RPGIFFGQCSEICGANHSFIPI 294
+ G FGQCSEICGA HSF+PI
Sbjct: 180 QSGTLFGQCSEICGAKHSFMPI 201
>UniRef50_Q950S5 Cluster: Cytochrome c oxidase subunit 2; n=8;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit 2
- Spizellomyces punctatus
Length = 266
Score = 86.6 bits (205), Expect = 2e-16
Identities = 39/92 (42%), Positives = 53/92 (57%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
+I FDS+++ +++ + R L VD ++ DVIHS +PSL +K DA
Sbjct: 158 SIAFDSFMVSDADLELGDLRTLAVDNYLVLPINTSIRLLISSNDVIHSFALPSLAIKADA 217
Query: 190 NPGRLNQTNFFINRPGIFFGQCSEICGANHSF 285
PGRLN T INRP F+GQCSE+CG H F
Sbjct: 218 IPGRLNSTGLIINRPSTFYGQCSELCGVLHGF 249
>UniRef50_P24894 Cluster: Cytochrome c oxidase subunit 2; n=51;
Chromadorea|Rep: Cytochrome c oxidase subunit 2 -
Caenorhabditis elegans
Length = 231
Score = 85.8 bits (203), Expect = 3e-16
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
+EFDSY+ +++ E RLL+VD T+ DVIH+ + SL VK+DA
Sbjct: 119 LEFDSYMKSLDQLSLGEPRLLEVDNRCVIPCDTNIRFCITSADVIHAWALNSLSVKLDAM 178
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
G L+ ++ G+F+GQCSEICGANHSF+PI +E
Sbjct: 179 SGILSTFSYSFPMVGVFYGQCSEICGANHSFMPIALE 215
>UniRef50_A5VD54 Cluster: Cytochrome c oxidase, subunit II
precursor; n=2; Alphaproteobacteria|Rep: Cytochrome c
oxidase, subunit II precursor - Sphingomonas wittichii
RW1
Length = 338
Score = 85.0 bits (201), Expect = 5e-16
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNN-EFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVD 186
+ E S ++P E K E R+L VD T+ DVIHS +P+ K+D
Sbjct: 179 DFELVSNMLPDAEAKKRGEPRMLAVDERVVVPVDAVVKVIVTSNDVIHSWAVPAFWTKMD 238
Query: 187 ANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGRLN+T F R G+++GQCSE+CGA H F+PI +E
Sbjct: 239 AVPGRLNETWFKAEREGLYYGQCSELCGARHGFMPIAVE 277
>UniRef50_Q6NBJ7 Cluster: Cytochrome c oxidase subunit II precursor;
n=8; Alphaproteobacteria|Rep: Cytochrome c oxidase
subunit II precursor - Rhodopseudomonas palustris
Length = 285
Score = 84.6 bits (200), Expect = 7e-16
Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Frame = +1
Query: 7 NNIEFDSYIIPSNE-IKNNEF--RLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGV 177
+ IEF S ++ E K N RLL VD TA DVIHS IPS GV
Sbjct: 151 DKIEFTSIMLTDEERAKMNPVPPRLLGVDNEMVVPVDKVVRIQTTAADVIHSWAIPSFGV 210
Query: 178 KVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
K+DA PGRLN+ F + G ++GQCSE+CG +H+F+PIV+
Sbjct: 211 KIDAIPGRLNEAWFKAVKEGRYYGQCSELCGRDHAFMPIVV 251
>UniRef50_Q5KT47 Cluster: Cytochrome c oxidase subunit 2; n=1;
Doliolum nationalis|Rep: Cytochrome c oxidase subunit 2
- Doliolum nationalis
Length = 239
Score = 84.6 bits (200), Expect = 7e-16
Identities = 42/94 (44%), Positives = 57/94 (60%)
Frame = +1
Query: 22 DSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGR 201
DSY++ + + RLLDVD T+TDVIH+ ++P+ VK DA PGR
Sbjct: 134 DSYMVAEPTV--GDLRLLDVDNRLSVPYGADIRFIVTSTDVIHAFSLPNFFVKCDAVPGR 191
Query: 202 LNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
LN + + PG+ +GQCSEICG NHSF+PI +E
Sbjct: 192 LNTSYVNSDVPGLAYGQCSEICGVNHSFMPICLE 225
>UniRef50_A0ASU6 Cluster: Cytochrome c oxidase subunit 2; n=1;
Hyridella menziesi|Rep: Cytochrome c oxidase subunit 2 -
Hyridella menziesi
Length = 321
Score = 84.2 bits (199), Expect = 9e-16
Identities = 37/80 (46%), Positives = 52/80 (65%)
Frame = +1
Query: 64 FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIF 243
+RLL+VD +++DV+HS +PSLGVKVD+ PGR+NQ + G+
Sbjct: 1 YRLLEVDNRCVVPYGVGVRVLVSSSDVVHSWAVPSLGVKVDSIPGRINQVILSLVGSGVV 60
Query: 244 FGQCSEICGANHSFIPIVIE 303
+GQCSE+CG NHSF+PI +E
Sbjct: 61 YGQCSELCGVNHSFMPICLE 80
>UniRef50_Q00227 Cluster: Cytochrome c oxidase subunit 2; n=5;
Mytilus|Rep: Cytochrome c oxidase subunit 2 - Mytilus
edulis (Blue mussel)
Length = 242
Score = 83.4 bits (197), Expect = 2e-15
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +1
Query: 22 DSYIIPSNE-IKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPG 198
DSY+ E +RLLDVD +++DV+HS +P L +KVDA PG
Sbjct: 133 DSYMEDQQETFSKGGYRLLDVDNRMVAPADVQMTAFVSSSDVLHSFALPKLLIKVDAIPG 192
Query: 199 RLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
R+N+ ++ I +GQCSEICG NHSF+PIVIE
Sbjct: 193 RINRLPMKASQCSIIYGQCSEICGVNHSFMPIVIE 227
>UniRef50_Q2GDE6 Cluster: Cytochrome c oxidase subunit 2; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: Cytochrome c
oxidase subunit 2 - Neorickettsia sennetsu (strain
Miyayama)
Length = 255
Score = 83.0 bits (196), Expect = 2e-15
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
I FDS + +++ E RLL VD T+ DVIHS +PSLG+K DA
Sbjct: 143 ITFDSNL--KHDLDEGEPRLLAVDNNLVLPVDTTVRIQITSDDVIHSWAVPSLGIKKDAI 200
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
PGRLN+T I++ G ++GQCSE+CG H F+PI +
Sbjct: 201 PGRLNETWVRIDKEGTYYGQCSELCGILHGFMPIAV 236
>UniRef50_Q8LWF1 Cluster: Cytochrome c oxidase subunit 2; n=8;
Bilateria|Rep: Cytochrome c oxidase subunit 2 -
Lampsilis teres
Length = 281
Score = 83.0 bits (196), Expect = 2e-15
Identities = 35/81 (43%), Positives = 49/81 (60%)
Frame = +1
Query: 61 EFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGI 240
++RLL+VD T+ DV+HS IPS +K D PGR+NQ + G+
Sbjct: 2 DYRLLEVDNRCVVSCLLQMRGLVTSDDVVHSWAIPSASIKADGVPGRINQVSLCFLYSGV 61
Query: 241 FFGQCSEICGANHSFIPIVIE 303
F+GQCSE+CG NHSF+P+ +E
Sbjct: 62 FYGQCSELCGVNHSFMPVCVE 82
>UniRef50_Q985X2 Cluster: Cytochrome c oxidase subunit 2; n=18;
Alphaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- Rhizobium loti (Mesorhizobium loti)
Length = 333
Score = 82.6 bits (195), Expect = 3e-15
Identities = 37/78 (47%), Positives = 50/78 (64%)
Frame = +1
Query: 67 RLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFF 246
RLL VD TATDVIHS +PS G+K+DA PGR N+T F + G+++
Sbjct: 215 RLLAVDNELVVPVNTMTRVLVTATDVIHSFAMPSFGIKIDAIPGRTNETWFKAEKEGLYY 274
Query: 247 GQCSEICGANHSFIPIVI 300
GQCS++CG +H+F+PI I
Sbjct: 275 GQCSQLCGKDHAFMPIAI 292
>UniRef50_A3VPG7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Parvularcula bermudensis HTCC2503|Rep: Cytochrome c
oxidase subunit 2 - Parvularcula bermudensis HTCC2503
Length = 392
Score = 82.6 bits (195), Expect = 3e-15
Identities = 36/99 (36%), Positives = 57/99 (57%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F + EFD+ + P + + +N +RL + DVIHS +P+ G+K+
Sbjct: 253 FGDFEFDALMAPKDSVPSNLYRLATTNDVVVPAGETIRIAT-VGRDVIHSWAMPAFGIKI 311
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
DA PGR N+T F+ G ++GQCSE+CG +H+F+PI +
Sbjct: 312 DAIPGRYNETWFYTENEGTYYGQCSEMCGLDHAFMPISV 350
>UniRef50_Q0BPU5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Granulibacter bethesdensis CGDNIH1|Rep: Cytochrome c
oxidase subunit 2 - Granulobacter bethesdensis (strain
ATCC BAA-1260 / CGDNIH1)
Length = 300
Score = 81.8 bits (193), Expect = 5e-15
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +1
Query: 7 NNIE-FDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
N I+ +S +I ++K ++ RLL VD T+ DVIHS IPSLGV+
Sbjct: 162 NGIDSIESRVIQDGDLKPDQIRLLSVDNQVVVPYGKNVRVLVTSADVIHSFFIPSLGVQR 221
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A PGR +T F +++PG+++G+C++ICGA HS +PI ++
Sbjct: 222 YAIPGRTIETWFRVDKPGVYYGECNQICGAFHSQMPIAVK 261
>UniRef50_Q9RM99 Cluster: Cytochrome c oxidase subunit II precursor;
n=8; Alphaproteobacteria|Rep: Cytochrome c oxidase
subunit II precursor - Bradyrhizobium japonicum
Length = 279
Score = 81.4 bits (192), Expect = 7e-15
Identities = 41/95 (43%), Positives = 57/95 (60%)
Frame = +1
Query: 16 EFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANP 195
EFDS + ++ + RLL VD T DVIH+ +P+ GVK+DA P
Sbjct: 155 EFDSLMA-----QDKQPRLLGVDNEMVVPVNKVIRVQVTGADVIHAFALPAFGVKIDAIP 209
Query: 196 GRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
GRLN+T F + G+F+GQCSE+CG +H+F+PI I
Sbjct: 210 GRLNETWFKAAKTGMFYGQCSELCGKDHAFMPIAI 244
>UniRef50_Q0C3D3 Cluster: Cytochrome c oxidase subunit 2; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Cytochrome c
oxidase subunit 2 - Hyphomonas neptunium (strain ATCC
15444)
Length = 322
Score = 81.4 bits (192), Expect = 7e-15
Identities = 36/78 (46%), Positives = 47/78 (60%)
Frame = +1
Query: 67 RLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFF 246
RLL D A DVIHS +PS VKVDA PGRLN+ F + PG+++
Sbjct: 203 RLLATDYPMVVPEDRYVRFYTAAADVIHSWAVPSFAVKVDAIPGRLNEGWFLVKEPGVYY 262
Query: 247 GQCSEICGANHSFIPIVI 300
GQCSE+CG +H+F+PI +
Sbjct: 263 GQCSELCGVDHAFMPIEV 280
>UniRef50_Q3KSX4 Cluster: Cytochrome c oxidase subunit 2; n=4;
Margaritiferidae|Rep: Cytochrome c oxidase subunit 2 -
Margaritifera hembeli
Length = 271
Score = 81.0 bits (191), Expect = 9e-15
Identities = 36/77 (46%), Positives = 47/77 (61%)
Frame = +1
Query: 64 FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIF 243
+RLLDVD +++DV+HS IPS GVKVD GR+NQ PG+
Sbjct: 3 YRLLDVDNRFVVPYTVPMRVLVSSSDVVHSWAIPSAGVKVDGVAGRVNQVGLSFFGPGVV 62
Query: 244 FGQCSEICGANHSFIPI 294
+GQCSE+CG NHSF+P+
Sbjct: 63 YGQCSELCGVNHSFMPV 79
>UniRef50_P08306 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=20; Alphaproteobacteria|Rep: Cytochrome c oxidase
subunit 2 precursor (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide II) (Cytochrome aa3 subunit 2) (Oxidase
aa(3) subunit 2) - Paracoccus denitrificans
Length = 298
Score = 81.0 bits (191), Expect = 9e-15
Identities = 33/58 (56%), Positives = 47/58 (81%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
TATDVIH+ TIP+ VK DA PGR+ Q F +++ G++FGQCSE+CG NH+++PIV++
Sbjct: 204 TATDVIHAWTIPAFAVKQDAVPGRIAQLWFSVDQEGVYFGQCSELCGINHAYMPIVVK 261
>UniRef50_Q9A2Z9 Cluster: Cytochrome c oxidase subunit 2; n=8;
Alphaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- Caulobacter crescentus (Caulobacter vibrioides)
Length = 309
Score = 80.6 bits (190), Expect = 1e-14
Identities = 33/58 (56%), Positives = 46/58 (79%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
TA DVIH+ +P+ G+K DA PGRLN+T F +R G+F+GQCSE+CG +H+F+PI I+
Sbjct: 197 TAADVIHAFALPAFGLKTDAIPGRLNETWFKADRTGVFYGQCSELCGVDHAFMPIEIK 254
>UniRef50_Q8LWE8 Cluster: Cytochrome c oxidase subunit 2; n=10;
Unionidae|Rep: Cytochrome c oxidase subunit 2 - Anodonta
implicata
Length = 286
Score = 80.6 bits (190), Expect = 1e-14
Identities = 35/80 (43%), Positives = 48/80 (60%)
Frame = +1
Query: 64 FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIF 243
+RLL+V+ T+ DV+HS IPS +KVD PGR+NQ G+F
Sbjct: 3 YRLLEVNNRCVVAALLHMRALVTSADVVHSWAIPSACIKVDGIPGRINQVGLCFIYTGVF 62
Query: 244 FGQCSEICGANHSFIPIVIE 303
+GQCSE+CG NHSF+P+ +E
Sbjct: 63 YGQCSELCGVNHSFMPVCVE 82
>UniRef50_A5II83 Cluster: Cytochrome c oxidase subunit 2; n=5;
Legionellales|Rep: Cytochrome c oxidase subunit 2 -
Legionella pneumophila (strain Corby)
Length = 401
Score = 80.2 bits (189), Expect = 2e-14
Identities = 36/87 (41%), Positives = 54/87 (62%)
Frame = +1
Query: 43 NEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFF 222
N+ K N++ LL+VD T+ DV+HS +P LGVK DA PG +++
Sbjct: 160 NKQKKNQWYLLEVDNPLVVPVNKKIRFLVTSNDVVHSWWVPELGVKRDAIPGFMHEAWAR 219
Query: 223 INRPGIFFGQCSEICGANHSFIPIVIE 303
I +PG++ GQC+E+CG NH F+PIV++
Sbjct: 220 IEKPGVYRGQCAELCGINHGFMPIVVK 246
>UniRef50_Q0HPW4 Cluster: Cytochrome c oxidase, subunit II
precursor; n=74; Proteobacteria|Rep: Cytochrome c
oxidase, subunit II precursor - Shewanella sp. (strain
MR-7)
Length = 513
Score = 79.4 bits (187), Expect = 3e-14
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +1
Query: 34 IPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQT 213
I NE K + LL+VD T+ DVIHS +P+ VK DANPG +N+
Sbjct: 150 IEGNEAKGEHY-LLEVDKPLVLPINRKIRFLMTSEDVIHSWWVPAFAVKKDANPGFINEA 208
Query: 214 NFFINRPGIFFGQCSEICGANHSFIPIVIE 303
I++PGI+ GQC+E+CG +H F+PIV++
Sbjct: 209 WTRIDKPGIYRGQCAELCGKDHGFMPIVVQ 238
>UniRef50_Q7P0G8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Chromobacterium violaceum|Rep: Cytochrome c oxidase
subunit 2 - Chromobacterium violaceum
Length = 371
Score = 78.6 bits (185), Expect = 5e-14
Identities = 37/78 (47%), Positives = 47/78 (60%)
Frame = +1
Query: 70 LLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFG 249
LL+VD TA DVIHS +P LGVK DA PG L + I +PG++ G
Sbjct: 159 LLEVDEPLVVPTDRKIRLLLTANDVIHSWWVPQLGVKQDAIPGFLRDSWMLIEKPGVYRG 218
Query: 250 QCSEICGANHSFIPIVIE 303
QCSE+CG +H F+PIV+E
Sbjct: 219 QCSELCGKDHGFMPIVVE 236
>UniRef50_Q06SA7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Acanthocardia tuberculata|Rep: Cytochrome c oxidase
subunit 2 - Acanthocardia tuberculata (tuberculate
cockle)
Length = 240
Score = 78.6 bits (185), Expect = 5e-14
Identities = 37/102 (36%), Positives = 57/102 (55%), Gaps = 3/102 (2%)
Frame = +1
Query: 7 NNIEFDSYIIPS---NEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGV 177
+ + ++SY++P+ NE F+ +DVD T+ DVIHS IPS G+
Sbjct: 122 DELVYESYLLPAEEANERGGGMFQYMDVDKRCVLPSDKLIRVLFTSEDVIHSWFIPSFGL 181
Query: 178 KVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
K D PGR+ + I PG+++G C+E+CG HS +PI +E
Sbjct: 182 KNDCVPGRVGSASLVIKEPGVYYGFCTELCGVLHSEMPIAVE 223
>UniRef50_Q03736 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=9; Rhodobacteraceae|Rep: Cytochrome c oxidase subunit
2 precursor (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide II) (Cytochrome aa3 subunit 2) (Oxidase
aa(3) subunit 2) - Rhodobacter sphaeroides
(Rhodopseudomonas sphaeroides)
Length = 303
Score = 78.6 bits (185), Expect = 5e-14
Identities = 34/58 (58%), Positives = 43/58 (74%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T DVIHS T+P+ GVK DA PGRL Q F R GIFFGQCSE+CG +H+++PI ++
Sbjct: 211 TGADVIHSWTVPAFGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVK 268
>UniRef50_Q9B4Q4 Cluster: Cytochrome c oxidase subunit 2; n=153;
Neoptera|Rep: Cytochrome c oxidase subunit 2 - Diadasia
afflicta
Length = 189
Score = 78.2 bits (184), Expect = 6e-14
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FNNIEFDSY+I +N NN FRLLD D T+ DVIH+ TIPSLG+K+
Sbjct: 113 FNNIEFDSYMI-NNFNNNNFFRLLDTDNRLIIPTKIPIRLITTSMDVIHAWTIPSLGIKM 171
Query: 184 DANPGRLNQTNFFINRP 234
D+ PGR+N +N F RP
Sbjct: 172 DSIPGRINHSNLFTLRP 188
>UniRef50_Q9XKD8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit 2 -
Dicyema misakiense
Length = 217
Score = 77.8 bits (183), Expect = 8e-14
Identities = 37/100 (37%), Positives = 58/100 (58%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+++ E +SY+ SN+ N F LDVD +++DV+HS +PSLG+K+
Sbjct: 114 YDSFEGNSYV--SNDDFNGCFYALDVDNRLVVPMSKYVELIVSSSDVLHSFALPSLGIKL 171
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGR+ ++ P +GQCSE+CG H+ +P+ IE
Sbjct: 172 DAVPGRIMSIMLCVDLPSALYGQCSEMCGTGHALMPLCIE 211
>UniRef50_Q1GTA3 Cluster: Cytochrome-c oxidase precursor; n=6;
Sphingomonadales|Rep: Cytochrome-c oxidase precursor -
Sphingopyxis alaskensis (Sphingomonas alaskensis)
Length = 343
Score = 77.0 bits (181), Expect = 1e-13
Identities = 29/58 (50%), Positives = 42/58 (72%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T DVIHS +P+ K+DA PGR N+T F N+ G+++GQCSE+CG +H ++PI +E
Sbjct: 240 TGADVIHSFAVPAFWTKMDAVPGRANETTFTANKVGVYYGQCSELCGVDHGYMPIAVE 297
>UniRef50_A2D6F1 Cluster: Cytochrome c oxidase subunit 2; n=2;
Gyrodactylus|Rep: Cytochrome c oxidase subunit 2 -
Gyrodactylus salaris (Flatworm)
Length = 193
Score = 76.2 bits (179), Expect = 2e-13
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
+++DVIHS +IP LG+K+D PGR+N ++ +R G+F G CSE+CG HSF+PI IE
Sbjct: 132 SSSDVIHSFSIPDLGLKMDGIPGRINHLSYLPDRVGVFVGYCSELCGVGHSFMPICIE 189
>UniRef50_A1Z3B2 Cluster: Cytochrome c oxidase subunit 2; n=2;
Bilateria|Rep: Cytochrome c oxidase subunit 2 -
Romanomermis iyengari
Length = 221
Score = 75.8 bits (178), Expect = 3e-13
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
+++DVIHS +PS+G K+DA PGRLN + PG FFGQCSE+CG HS++PI+IE
Sbjct: 150 SSSDVIHSWALPSMGFKMDAIPGRLNFYMLMFSIPGKFFGQCSELCGVYHSWMPIMIE 207
>UniRef50_A4A925 Cluster: Cytochrome c oxidase subunit 2; n=4;
Gammaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- Congregibacter litoralis KT71
Length = 396
Score = 75.4 bits (177), Expect = 4e-13
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Frame = +1
Query: 7 NNIEFDSYI-IPSNEIKN----NEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSL 171
+N+ F S + P +EI N NE LL+VD TA DVIH+ +P L
Sbjct: 163 DNVTFFSNLQTPQSEIYNSADKNENYLLEVDEPVVIPVNTKVRFLVTANDVIHAWWVPEL 222
Query: 172 GVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
VK DA PG +N+T GI+ GQC+E+CG +H F+PIV++
Sbjct: 223 AVKKDAVPGFINETWTLAEEEGIYRGQCAELCGKDHGFMPIVVK 266
>UniRef50_Q9B8W2 Cluster: Cytochrome c oxidase subunit 2; n=17;
Eucestoda|Rep: Cytochrome c oxidase subunit 2 - Taenia
crassiceps
Length = 194
Score = 75.4 bits (177), Expect = 4e-13
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS ++PSL +K+DA PGRLN F ++ G+F G C+E+CG NHS +PI+IE
Sbjct: 130 TSADVIHSFSVPSLNLKMDAIPGRLNHLFFCPSQHGVFLGYCAELCGVNHSVMPIMIE 187
>UniRef50_Q9B8U3 Cluster: Cytochrome c oxidase subunit 2; n=7;
Schistosomatidae|Rep: Cytochrome c oxidase subunit 2 -
Schistosoma mekongi
Length = 232
Score = 75.4 bits (177), Expect = 4e-13
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS +IP LG+K+DA PGR+N +R G+F G C+E+CGA HS++PIV E
Sbjct: 149 TSNDVIHSFSIPDLGIKIDAIPGRINSIVKKFDRYGVFVGYCTELCGAGHSYMPIVAE 206
>UniRef50_A5G0I4 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Acidiphilium cryptum JF-5|Rep:
Cytochrome c oxidase, subunit II precursor -
Acidiphilium cryptum (strain JF-5)
Length = 316
Score = 74.9 bits (176), Expect = 6e-13
Identities = 38/96 (39%), Positives = 53/96 (55%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDAN 192
++F SY IP N+IK + L D T+ DV+HS IPSLGV+ A
Sbjct: 159 VDFTSYPIPDNQIKPGQIARLSADHPLVLPANEKIVFKITSADVLHSFFIPSLGVQRYAI 218
Query: 193 PGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
PG+ I+ PGI++G+C++ICG NH +PI I
Sbjct: 219 PGQYWHQWTKIDAPGIYYGECNQICGMNHDNMPIEI 254
>UniRef50_Q06Y85 Cluster: Cytochrome c oxidase subunit 2; n=3;
Ascomycota|Rep: Cytochrome c oxidase subunit 2 -
Trigonopsis vinaria
Length = 171
Score = 74.5 bits (175), Expect = 7e-13
Identities = 34/81 (41%), Positives = 48/81 (59%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
+ + FDSYI + ++ E RLLDVD T+ DV+H+ +PSLG+K+
Sbjct: 91 YETMGFDSYIKAEDMLETGELRLLDVDNRLIIPTETNINFIVTSQDVMHNFFVPSLGIKI 150
Query: 184 DANPGRLNQTNFFINRPGIFF 246
DA PGRLNQ + NRPG+F+
Sbjct: 151 DATPGRLNQISTLCNRPGLFY 171
>UniRef50_Q8PFT5 Cluster: Cytochrome c oxidase subunit 2; n=8;
Gammaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- Xanthomonas axonopodis pv. citri
Length = 328
Score = 74.1 bits (174), Expect = 1e-12
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +1
Query: 70 LLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFG 249
LLDVD TA DVIH+ +P+LG K DA PG +N+ I +PG++ G
Sbjct: 183 LLDVDNRLVLPVNTKIRFVITADDVIHAWWVPALGWKQDAIPGIVNEAWTNIEQPGVYRG 242
Query: 250 QCSEICGANHSFIPIVIE 303
QC+E+CG +H F+PIV+E
Sbjct: 243 QCAELCGKDHGFMPIVVE 260
>UniRef50_Q47G11 Cluster: Cytochrome c oxidase, subunit
II:Cytochrome c, class I:Cytochrome C oxidase subunit
II, transmembrane region precursor; n=1; Dechloromonas
aromatica RCB|Rep: Cytochrome c oxidase, subunit
II:Cytochrome c, class I:Cytochrome C oxidase subunit
II, transmembrane region precursor - Dechloromonas
aromatica (strain RCB)
Length = 401
Score = 74.1 bits (174), Expect = 1e-12
Identities = 35/87 (40%), Positives = 49/87 (56%)
Frame = +1
Query: 40 SNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNF 219
+N E LL+VD T+ DVIH+ +P GVK DA PG L +T
Sbjct: 175 TNAEAKGEHYLLEVDKPVVLPVGKKVRVLLTSIDVIHTWWVPQFGVKRDAIPGFLRETWV 234
Query: 220 FINRPGIFFGQCSEICGANHSFIPIVI 300
I +PGI+ GQC+E+CG +H F+P+V+
Sbjct: 235 LIEKPGIYRGQCAELCGKDHGFMPVVV 261
>UniRef50_Q1HBC0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Strelkovimermis spiculatus|Rep: Cytochrome c oxidase
subunit 2 - Strelkovimermis spiculatus
Length = 229
Score = 72.9 bits (171), Expect = 2e-12
Identities = 32/58 (55%), Positives = 42/58 (72%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS +PSLG K+DA PGRLN N P + GQCSE+CG+ HS++PI++E
Sbjct: 157 TSQDVIHSWALPSLGFKMDACPGRLNYYVLSSNLPSLHIGQCSELCGSYHSWMPIMVE 214
>UniRef50_Q5W913 Cluster: Cytochrome c oxidase subunit 2; n=1;
Lingula anatina|Rep: Cytochrome c oxidase subunit 2 -
Lingula unguis
Length = 249
Score = 72.5 bits (170), Expect = 3e-12
Identities = 39/109 (35%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Frame = +1
Query: 4 FNNIEFDSYI----IPSNE-----IKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS* 156
F E DSY +PS + + LLDVD T+ DVIHS
Sbjct: 123 FFGFEHDSYALLNDVPSTSDDDTVLSKGDTYLLDVDAPFVIPQGMPGELLVTSDDVIHSW 182
Query: 157 TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
++P+LG+ VD PGRLN++ + G+ +G C E+CG NH +PI +E
Sbjct: 183 SVPALGITVDGVPGRLNRSPILASTVGVAYGHCRELCGVNHFMMPICVE 231
>UniRef50_P14545 Cluster: Cytochrome c oxidase subunit 2; n=17;
Kinetoplastida|Rep: Cytochrome c oxidase subunit 2 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 210
Score = 70.9 bits (166), Expect = 9e-12
Identities = 38/99 (38%), Positives = 49/99 (49%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F S +I ++ + RLL + +A DVIHS I SLGVKV
Sbjct: 109 FGETTIFSNLILESDYMIGDLRLLQCNHVLTLLSLVIYKLWLSAVDVIHSFAISSLGVKV 168
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
D PGR N+ F + +GQCSE+CG H F+PIVI
Sbjct: 169 DCIPGRCNEIVLFSSNNATVYGQCSELCGVLHGFMPIVI 207
>UniRef50_Q9B8Y1 Cluster: Cytochrome c oxidase subunit 2; n=3;
Digenea|Rep: Cytochrome c oxidase subunit 2 - Fasciola
hepatica (Liver fluke)
Length = 200
Score = 70.5 bits (165), Expect = 1e-11
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T++DVIHS ++P +K DA PGRLN ++ GI+ G C+E+CGA H+++PIV+E
Sbjct: 133 TSSDVIHSFSVPEFNIKTDAIPGRLNCVSYCPGHLGIYVGYCTELCGAGHAYMPIVVE 190
>UniRef50_A3QRI4 Cluster: Cytochrome c oxidase subunit 2; n=1;
Microcotyle sebastis|Rep: Cytochrome c oxidase subunit 2
- Microcotyle sebastis
Length = 213
Score = 70.1 bits (164), Expect = 2e-11
Identities = 29/57 (50%), Positives = 39/57 (68%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
T+ DV+HS ++P+ +KVDA PGR+N N PG G CSE CGA HS++PI+I
Sbjct: 154 TSADVLHSFSLPAAQLKVDATPGRINSIYLLANIPGRHLGYCSEFCGAQHSYMPIII 210
>UniRef50_Q09QS8 Cluster: Cytochrome c oxidase subunit 2; n=3;
Embryophyta|Rep: Cytochrome c oxidase subunit 2 -
Huperzia lucidula (Shining clubmoss) (Lycopodium
lucidulum)
Length = 141
Score = 69.3 bits (162), Expect = 3e-11
Identities = 27/40 (67%), Positives = 34/40 (85%)
Frame = +1
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DA PGR NQT+ FI R G+++GQCSEICG NH+F+PIV+E
Sbjct: 91 DAVPGRSNQTSIFIKRDGVYYGQCSEICGTNHAFMPIVVE 130
>UniRef50_O21346 Cluster: Cytochrome c oxidase subunit 2; n=6;
Protostomia|Rep: Cytochrome c oxidase subunit 2 -
Euhadra herklotsi
Length = 227
Score = 67.7 bits (158), Expect = 9e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDA 189
N ++DSY+ P+++++ E+RLL+VD T+ DVIH+ +PSLG+K+D+
Sbjct: 116 NKQYDSYMTPTSDLQPGEYRLLEVDNRVVLPSNIDTSIITTSADVIHAWAMPSLGIKMDS 175
Query: 190 NPGRLNQTNFFINRPGIFFG 249
PGRLN N G+F+G
Sbjct: 176 VPGRLNMMNVKPLVAGVFYG 195
>UniRef50_UPI0000E87C4E Cluster: cytochrome c oxidase, subunit II;
n=1; Methylophilales bacterium HTCC2181|Rep: cytochrome
c oxidase, subunit II - Methylophilales bacterium
HTCC2181
Length = 378
Score = 66.9 bits (156), Expect = 2e-10
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = +1
Query: 70 LLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFG 249
LL+VD TA DVIH+ +P LG K DA PG +N I + G++ G
Sbjct: 167 LLNVDNPIVLPINTKIRILTTANDVIHAWWVPDLGWKRDAIPGFINDNWAIIEKAGVYRG 226
Query: 250 QCSEICGANHSFIPIVI 300
QC+EICG H ++PIV+
Sbjct: 227 QCTEICGKGHGYMPIVV 243
>UniRef50_Q4FE08 Cluster: Cytochrome c oxidase subunit 2; n=1;
Placopecten magellanicus|Rep: Cytochrome c oxidase
subunit 2 - Placopecten magellanicus (Sea scallop)
Length = 228
Score = 66.9 bits (156), Expect = 2e-10
Identities = 33/80 (41%), Positives = 44/80 (55%)
Frame = +1
Query: 64 FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIF 243
F L+ VD T+ DV+HS P L +KVDA PGRL + F + +PG+F
Sbjct: 139 FDLMKVDWVLSVPVKKLVRVLVTSDDVLHSWGCPRLFMKVDAIPGRLTRGLFKVMQPGVF 198
Query: 244 FGQCSEICGANHSFIPIVIE 303
G C E+CG HS +P V+E
Sbjct: 199 HGMCVELCGLLHSLMPTVVE 218
>UniRef50_Q0ABY9 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Alkalilimnicola ehrlichei MLHE-1|Rep:
Cytochrome c oxidase, subunit II precursor -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 311
Score = 66.1 bits (154), Expect = 3e-10
Identities = 30/77 (38%), Positives = 44/77 (57%)
Frame = +1
Query: 70 LLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFG 249
LL+VD T+ DVIHS +P G K D PG +N+ ++ PG + G
Sbjct: 171 LLEVDNPLVLPVGKRVRFLLTSNDVIHSWWVPEFGWKKDTIPGFVNEAWVQVDEPGTYRG 230
Query: 250 QCSEICGANHSFIPIVI 300
QC+E+CG +H+F+PIV+
Sbjct: 231 QCAELCGRDHAFMPIVV 247
>UniRef50_Q9XN19 Cluster: Cytochrome c oxidase subunit 2; n=1;
Euglena gracilis|Rep: Cytochrome c oxidase subunit 2 -
Euglena gracilis
Length = 196
Score = 66.1 bits (154), Expect = 3e-10
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPI 294
++ DVIHS +P+LG+KVDA PGR+N + G++ G CSE+CG+ H+F+PI
Sbjct: 137 SSLDVIHSFALPTLGIKVDAIPGRINNISINGLTQGLYVGYCSELCGSGHAFMPI 191
>UniRef50_Q06SC1 Cluster: Cytochrome c oxidase subunit 2; n=1;
Hiatella arctica|Rep: Cytochrome c oxidase subunit 2 -
Hiatella arctica
Length = 361
Score = 66.1 bits (154), Expect = 3e-10
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIH ++P LG+K+D PGR+N G+FFGQC +CG +HS +PI ++
Sbjct: 285 TSEDVIHGFSVPGLGLKIDCIPGRINTNTIKEESSGVFFGQCHVLCGVHHSVMPIRVD 342
>UniRef50_Q0Z878 Cluster: Cytochrome c oxidase subunit 2; n=5;
Mermithidae|Rep: Cytochrome c oxidase subunit 2 -
Agamermis sp. BH-2006
Length = 233
Score = 65.7 bits (153), Expect = 3e-10
Identities = 30/58 (51%), Positives = 40/58 (68%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS +PS+ +K+DA PGRLN + I G + GQCSE+CG HS++PI E
Sbjct: 153 TSNDVIHSWALPSISLKMDAVPGRLNMLSTKILSIGNYMGQCSELCGNYHSWMPIYAE 210
>UniRef50_Q0VNA0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Alcanivorax borkumensis SK2|Rep: Cytochrome c oxidase
subunit 2 - Alcanivorax borkumensis (strain SK2 / ATCC
700651 / DSM 11573)
Length = 402
Score = 65.3 bits (152), Expect = 5e-10
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 73 LDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFI--NRPGIFF 246
L+VD T+ DVIHS +P G K DA PG +N+T + + G ++
Sbjct: 197 LEVDNKLLIPSGQKVRFLVTSDDVIHSFWVPDFGGKKDAIPGFVNETWALVPEGKEGTYY 256
Query: 247 GQCSEICGANHSFIPIVIE 303
GQC+E+CG NH+F+PI +E
Sbjct: 257 GQCAELCGKNHAFMPIAVE 275
>UniRef50_Q950Y9 Cluster: Cytochrome c oxidase subunit 2; n=5;
Tetrahymena|Rep: Cytochrome c oxidase subunit 2 -
Tetrahymena thermophila
Length = 604
Score = 65.3 bits (152), Expect = 5e-10
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPI 294
D++HS IP LG+K+D PGR FFI+ G ++GQC+EICG H +PI
Sbjct: 511 DIVHSWFIPGLGIKLDCVPGRSTHHTFFIDNVGFYYGQCAEICGRYHHHMPI 562
>UniRef50_Q39CP6 Cluster: Cytochrome c oxidase subunit 2; n=62;
Proteobacteria|Rep: Cytochrome c oxidase subunit 2 -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 531
Score = 64.9 bits (151), Expect = 6e-10
Identities = 27/58 (46%), Positives = 40/58 (68%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
TA DV+HS +P+ GVK DA PG + T F ++ G F G C+E+CG H+++P+V+E
Sbjct: 206 TANDVVHSWYVPAFGVKQDAIPGFVRDTWFKADKVGTFRGFCTELCGKEHAYMPVVVE 263
>UniRef50_Q8WF55 Cluster: Cytochrome c oxidase subunit 2; n=1;
Venerupis (Ruditapes) philippinarum|Rep: Cytochrome c
oxidase subunit 2 - Venerupis (Ruditapes) philippinarum
Length = 515
Score = 63.7 bits (148), Expect = 1e-09
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Frame = +1
Query: 13 IEFDSYIIPSNEIKNNE--------FRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPS 168
+++DSY++P + + + E FR +V + DVIHS +
Sbjct: 279 LKYDSYMVPDDSLSSGESKVFGMGGFRSQEVSDPCYLCCDEKNEVLVSTADVIHSWGVLE 338
Query: 169 LGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
LGVK+D PGR++ + PG+F+G C E+CG HS +PI +
Sbjct: 339 LGVKIDTIPGRVSAVSVEPCIPGVFYGFCYELCGPGHSEMPICV 382
>UniRef50_Q1YUZ5 Cluster: Cytochrome c oxidase subunit 2; n=2;
Gammaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- gamma proteobacterium HTCC2207
Length = 381
Score = 62.9 bits (146), Expect = 2e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T DVIHS +P GVK DA PG ++PG + G+C+E+CG H+F+P+V+E
Sbjct: 191 TGNDVIHSWWVPDFGVKRDAVPGLFTAGWAKTDKPGTYVGECTELCGQGHAFMPVVVE 248
>UniRef50_A7LIC0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Argopecten irradians|Rep: Cytochrome c oxidase subunit 2
- Aequipecten irradians (Bay scallop) (Argopecten
irradians)
Length = 233
Score = 62.9 bits (146), Expect = 2e-09
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DV+HS P L +K+DA PGRL + F + PG+ G C E+CGA HS +P +IE
Sbjct: 161 TSEDVLHSWGAPRLLLKIDAIPGRLTRGLFELKLPGVIKGMCVELCGAYHSMMPTIIE 218
>UniRef50_A5NSI7 Cluster: Cytochrome c, monohaem precursor; n=3;
Rhizobiales|Rep: Cytochrome c, monohaem precursor -
Methylobacterium sp. 4-46
Length = 338
Score = 60.5 bits (140), Expect = 1e-08
Identities = 26/56 (46%), Positives = 37/56 (66%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
+TDVIHS +PSL K D PGR N +F RPG++ GQC+E CG H+ + +++
Sbjct: 167 STDVIHSFWVPSLTGKQDLIPGRTNAIHFTAERPGLYRGQCAEFCGMQHAKMGLLV 222
>UniRef50_Q9T6E1 Cluster: Cytochrome c oxidase subunit 2; n=12;
Agathis sp. DMA-1998|Rep: Cytochrome c oxidase subunit 2
- Agathis sp. DMA-1998
Length = 185
Score = 60.5 bits (140), Expect = 1e-08
Identities = 35/76 (46%), Positives = 44/76 (57%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FN I FDS+++ + K + FRLLDVD ++ DVIHS + SLG K+
Sbjct: 112 FNEINFDSFMLKDFK-KIDLFRLLDVDNRLILPYNYFIRSLVSSNDVIHS-WLSSLGFKI 169
Query: 184 DANPGRLNQTNFFINR 231
DANPGRLNQ INR
Sbjct: 170 DANPGRLNQFIMMINR 185
>UniRef50_Q3SQ74 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Nitrobacter winogradskyi Nb-255|Rep:
Cytochrome c oxidase, subunit II precursor - Nitrobacter
winogradskyi (strain Nb-255 / ATCC 25391)
Length = 244
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T DVIHS +P LG K+DA PG N +RPG++ G C+E CGA HS
Sbjct: 167 TTKDVIHSFWVPRLGGKIDAIPGHRNVVRLQADRPGVYGGVCAEFCGAGHS 217
>UniRef50_A4VKM4 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 2; n=4; Proteobacteria|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 2 -
Pseudomonas stutzeri (strain A1501)
Length = 532
Score = 59.7 bits (138), Expect = 2e-08
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS +P LG K+D PGR N ++ G+F GQCSE CG+ H+ + + +E
Sbjct: 363 TSADVIHSFWVPRLGGKLDMVPGRTNTLRLQASQTGVFRGQCSEFCGSQHAHMILHVE 420
>UniRef50_Q98P34 Cluster: Cytochrome oxidase subunit II; n=2;
Rhizobiales|Rep: Cytochrome oxidase subunit II -
Rhizobium loti (Mesorhizobium loti)
Length = 330
Score = 58.8 bits (136), Expect = 4e-08
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
+TDVIHS +PSL K D PGR N +PGI+ GQC+E CG HS + +++
Sbjct: 159 STDVIHSFWVPSLAGKQDLVPGRPNDLLLRAEKPGIYRGQCAEFCGLQHSHMAVMV 214
>UniRef50_Q5ICD5 Cluster: Cytochrome c oxidase subunit 2; n=6;
Coccoidea|Rep: Cytochrome c oxidase subunit 2 -
Cylindrococcus casuarinae
Length = 89
Score = 58.4 bits (135), Expect = 5e-08
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 55 NNEFRL--LDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFIN 228
NN+F L ++ D T+ DVIHS T+PS+ VKVDA P ++N
Sbjct: 19 NNKFNLVFIETDCSLVVPFNQXIMLTVTSLDVIHSWTVPSVNVKVDALPNQINSLTLKFM 78
Query: 229 RPGIFFGQCSE 261
+PG+ FGQCSE
Sbjct: 79 KPGVMFGQCSE 89
>UniRef50_Q5P900 Cluster: Chain II protein of putative cytochrome c
oxidase; n=2; Proteobacteria|Rep: Chain II protein of
putative cytochrome c oxidase - Azoarcus sp. (strain
EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 279
Score = 56.8 bits (131), Expect = 2e-07
Identities = 25/58 (43%), Positives = 34/58 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS +P LG K+DA PGR N + G GQCSE CG H+ + + ++
Sbjct: 165 TSADVIHSFWVPRLGPKIDAVPGRTNVLRLQADEAGSLRGQCSEFCGTGHAHMVLKVQ 222
>UniRef50_Q8M1Z0 Cluster: Cytochrome c oxidase subunit 2; n=23;
Coccoidea|Rep: Cytochrome c oxidase subunit 2 -
Dysmicoccus brevipes
Length = 189
Score = 56.8 bits (131), Expect = 2e-07
Identities = 30/79 (37%), Positives = 44/79 (55%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FNN +F+SY++ N N F +++ D T+ DVIHS TIPS+ +K+
Sbjct: 114 FNN-KFNSYMMYKN---NFNFNMIETDNKMIIPFNMNLQLILTSMDVIHSWTIPSMNLKI 169
Query: 184 DANPGRLNQTNFFINRPGI 240
D P +LN NF N+PG+
Sbjct: 170 DTIPNQLNNQNFKTNKPGL 188
>UniRef50_Q6TY94 Cluster: Cytochrome c oxidase subunit 2; n=1;
Xiphinema americanum|Rep: Cytochrome c oxidase subunit 2
- Xiphinema americanum
Length = 206
Score = 56.4 bits (130), Expect = 2e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPI 294
+++DV+HS +PSLGVK+D+ PGR+N T + G C E+CG HS +P+
Sbjct: 148 SSSDVLHSLGLPSLGVKLDSVPGRINST-IIDGSSSVSIGSCYELCGTGHSAMPV 201
>UniRef50_Q60020 Cluster: Cytochrome c-aa3 oxidase subunit IIc
precursor; n=3; Thermus thermophilus|Rep: Cytochrome
c-aa3 oxidase subunit IIc precursor - Thermus
thermophilus
Length = 337
Score = 56.0 bits (129), Expect = 3e-07
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS +P L K DA PG+ + +F PG+++G C+E+CGA+H+
Sbjct: 156 TSKDVIHSFWVPGLAGKRDAIPGQTTRISFEPKEPGLYYGFCAELCGASHA 206
>UniRef50_Q1YMW9 Cluster: Putative cytochrome oxidase subunit II;
n=1; Aurantimonas sp. SI85-9A1|Rep: Putative cytochrome
oxidase subunit II - Aurantimonas sp. SI85-9A1
Length = 364
Score = 56.0 bits (129), Expect = 3e-07
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+TDVIHS +P+L K DA PG++N+T +R G++ GQC+E CG H+
Sbjct: 193 STDVIHSFWVPALSGKTDAIPGQINETWIQGDRVGVYRGQCTEYCGQQHT 242
>UniRef50_A6C5X8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit 2 - Planctomyces maris DSM 8797
Length = 321
Score = 55.6 bits (128), Expect = 4e-07
Identities = 25/53 (47%), Positives = 33/53 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ DVIH +P LG K+DA PGR N PG + G+CSE CGA H+++
Sbjct: 147 TSADVIHCFWVPQLGRKIDAIPGRDNYIWLQATNPGSYQGRCSEYCGAQHAWM 199
>UniRef50_Q67ML2 Cluster: Cytochrome c oxidase subunit 2; n=1;
Symbiobacterium thermophilum|Rep: Cytochrome c oxidase
subunit 2 - Symbiobacterium thermophilum
Length = 342
Score = 55.2 bits (127), Expect = 5e-07
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS +P L K D PGR+N + PG++ GQC+E CG +H+
Sbjct: 165 TSNDVIHSFWVPKLAGKTDMIPGRVNIAWIQADEPGVYLGQCAEFCGDSHA 215
>UniRef50_Q07JU2 Cluster: Cytochrome c oxidase, subunit II; n=3;
Rhodopseudomonas palustris|Rep: Cytochrome c oxidase,
subunit II - Rhodopseudomonas palustris (strain BisA53)
Length = 560
Score = 55.2 bits (127), Expect = 5e-07
Identities = 23/58 (39%), Positives = 36/58 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
++ DVIHS +P LG K+DA PG +N+ ++ GI+ G C+E CG H+ + +E
Sbjct: 484 SSADVIHSFWVPRLGGKIDAIPGHVNRIRLSASQAGIYRGVCAEFCGTEHTRMEFSVE 541
>UniRef50_A3U3Z7 Cluster: Cytochrome c oxidase, subunit IIc; n=7;
Rhodobacteraceae|Rep: Cytochrome c oxidase, subunit IIc
- Oceanicola batsensis HTCC2597
Length = 340
Score = 55.2 bits (127), Expect = 5e-07
Identities = 25/55 (45%), Positives = 35/55 (63%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIV 297
A VIHS IP+LG K+D PGR ++PG + GQC+E CGA+H+++ V
Sbjct: 169 ADKVIHSFWIPALGGKMDMFPGRETTFTLLPDKPGTYRGQCAEFCGASHAWMAFV 223
>UniRef50_Q5ICE0 Cluster: Cytochrome c oxidase subunit 2; n=3;
Eriococcidae|Rep: Cytochrome c oxidase subunit 2 -
Eriococcus fossilis
Length = 88
Score = 55.2 bits (127), Expect = 5e-07
Identities = 28/86 (32%), Positives = 44/86 (51%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FN ++Y+ N+ N L++ D ++ DVIHS TIP + +K+
Sbjct: 6 FNKKTINAYLTFKNKFDMN---LMETDNSISIPLNTQTMLIVSSMDVIHSWTIPEMNIKM 62
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSE 261
DA P ++N + +PGI +GQCSE
Sbjct: 63 DAVPNQINNMLVKVKKPGILYGQCSE 88
>UniRef50_Q30IA8 Cluster: Cytochrome c oxidase subunit 2; n=3;
Dichroplini|Rep: Cytochrome c oxidase subunit 2 -
Atrachelacris olivaceus
Length = 123
Score = 54.4 bits (125), Expect = 9e-07
Identities = 24/67 (35%), Positives = 39/67 (58%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
F N+EFD+Y+ P N+++N+ FRLL VD +++DV+HS +P+ K+
Sbjct: 44 FVNVEFDTYMTPENDLENBGFRLLXVDNRTILPMNTEVRVLTSSSDVLHSSAVPAXXNKI 103
Query: 184 DANPGRL 204
+ P RL
Sbjct: 104 YSTPXRL 110
>UniRef50_Q04441 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=3; Bacillus|Rep: Cytochrome c oxidase subunit 2
precursor (EC 1.9.3.1) (Cytochrome c oxidase polypeptide
II) (Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2)
- Bacillus pseudofirmus
Length = 342
Score = 54.4 bits (125), Expect = 9e-07
Identities = 22/52 (42%), Positives = 34/52 (65%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
A DV+HS +P+LG K+D PG N + PG+F G+C+E+CG +H+ +
Sbjct: 170 AQDVLHSFWVPALGGKIDTVPGITNHMWLEADEPGVFKGKCAELCGPSHALM 221
>UniRef50_A7HQK3 Cluster: Cytochrome c oxidase subunit II; n=1;
Parvibaculum lavamentivorans DS-1|Rep: Cytochrome c
oxidase subunit II - Parvibaculum lavamentivorans DS-1
Length = 394
Score = 54.0 bits (124), Expect = 1e-06
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ +VIH +P LG KVDA PG + +RPG + G C+E CG H+ + +E
Sbjct: 321 TSDNVIHGFWVPRLGGKVDATPGHEAAVRLYADRPGAYGGVCAEFCGTGHTTMTFRVE 378
>UniRef50_A7D014 Cluster: Cytochrome c oxidase subunit II; n=1;
Opitutaceae bacterium TAV2|Rep: Cytochrome c oxidase
subunit II - Opitutaceae bacterium TAV2
Length = 271
Score = 54.0 bits (124), Expect = 1e-06
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +1
Query: 136 TDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
TDVIHS +P L KVD P R N RPG ++GQC+E CG +H+
Sbjct: 28 TDVIHSFWVPKLAGKVDMIPNRGNHLWLHAERPGYYWGQCAEYCGESHA 76
>UniRef50_Q7USM3 Cluster: Cytochrome-c oxidase chain II/c; n=2;
Planctomycetaceae|Rep: Cytochrome-c oxidase chain II/c -
Rhodopirellula baltica
Length = 368
Score = 53.2 bits (122), Expect = 2e-06
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIH+ IPSLG KVD PGR N+ R G+F G C+E CG H+
Sbjct: 199 DVIHAFWIPSLGGKVDMMPGRENRLKLHPTRVGVFRGVCAEYCGEAHT 246
>UniRef50_Q2J8B8 Cluster: Cytochrome c oxidase subunit 2; n=3;
Frankia|Rep: Cytochrome c oxidase subunit 2 - Frankia
sp. (strain CcI3)
Length = 316
Score = 52.8 bits (121), Expect = 3e-06
Identities = 22/50 (44%), Positives = 31/50 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
++ DVIHS +P K D PGR+NQ I + G F G+C+E+CG +H
Sbjct: 218 SSPDVIHSFWVPEFLFKRDVIPGRVNQFELTITKTGTFIGRCAELCGTDH 267
>UniRef50_Q1H1C0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Methylobacillus flagellatus KT|Rep: Cytochrome c oxidase
subunit 2 - Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875)
Length = 346
Score = 52.8 bits (121), Expect = 3e-06
Identities = 24/57 (42%), Positives = 34/57 (59%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
A+DVIHS IP L K D PG+ N T ++PG + GQC+E CG H+ + ++
Sbjct: 175 ASDVIHSFWIPQLNGKTDMVPGKRNLTWVQADQPGSYRGQCTEFCGKQHAKMAFTVD 231
>UniRef50_A0G4F1 Cluster: Cytochrome c oxidase, subunit II; n=2;
Burkholderia|Rep: Cytochrome c oxidase, subunit II -
Burkholderia phymatum STM815
Length = 354
Score = 52.8 bits (121), Expect = 3e-06
Identities = 22/56 (39%), Positives = 36/56 (64%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
A DVIH+ +P+L K D PG + F ++PG++ GQC+E CGA H+ + +++
Sbjct: 183 AGDVIHTFWVPNLHGKKDMLPGIASTIEFRADKPGVYRGQCAEYCGAEHALMAMLV 238
>UniRef50_Q5V019 Cluster: Cytochrome c oxidase subunit 2; n=1;
Haloarcula marismortui|Rep: Cytochrome c oxidase subunit
2 - Haloarcula marismortui (Halobacterium marismortui)
Length = 271
Score = 52.4 bits (120), Expect = 3e-06
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+TDV H+ IP L VK DA PG+ F N G + +C E+CG+ HS +
Sbjct: 162 TSTDVFHNFGIPELRVKTDAVPGQYTSAWFTANETGTYAAKCYELCGSGHSLM 214
>UniRef50_Q41CV8 Cluster: Cytochrome-c oxidase precursor; n=1;
Exiguobacterium sibiricum 255-15|Rep: Cytochrome-c
oxidase precursor - Exiguobacterium sibiricum 255-15
Length = 345
Score = 52.0 bits (119), Expect = 5e-06
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ DVIHS +P+L K D NPG N+ G ++G+C+E+CG +H+ +
Sbjct: 169 TSKDVIHSFWVPALSGKTDTNPGLDNEMWLQAQEAGTYYGKCAELCGPSHALM 221
>UniRef50_Q8ER77 Cluster: Cytochrome c oxidase subunit 2; n=1;
Oceanobacillus iheyensis|Rep: Cytochrome c oxidase
subunit 2 - Oceanobacillus iheyensis
Length = 350
Score = 51.6 bits (118), Expect = 6e-06
Identities = 20/52 (38%), Positives = 34/52 (65%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
++DV HS IPS+ K+D NP +N + G+++G+C+E+CG +HS +
Sbjct: 167 SSDVTHSFWIPSISGKMDVNPENVNTMYIEAHEEGVYWGKCAELCGPSHSLM 218
>UniRef50_A6DSP0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Lentisphaera araneosa HTCC2155|Rep: Cytochrome c oxidase
subunit 2 - Lentisphaera araneosa HTCC2155
Length = 274
Score = 51.6 bits (118), Expect = 6e-06
Identities = 21/53 (39%), Positives = 36/53 (67%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ DV+HS IP++ VK DA PG+ + F + G+++ C+E+CG +H+F+
Sbjct: 89 TSKDVLHSFAIPAMRVKRDAVPGQKREFMFTPIKEGVYYYTCNEMCGTDHAFM 141
>UniRef50_Q094E4 Cluster: Cytochrome c oxidase subunit II; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Cytochrome c oxidase
subunit II - Stigmatella aurantiaca DW4/3-1
Length = 346
Score = 51.2 bits (117), Expect = 8e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+TDV+H ++P+ VK+DA PGR+NQT F R G++ C + CG +H
Sbjct: 251 STDVVHGFSLPNFRVKLDAVPGRVNQTWFQAAREGVWEVACYQHCGTSH 299
>UniRef50_A7H8L3 Cluster: Cytochrome c oxidase subunit II; n=5;
Cystobacterineae|Rep: Cytochrome c oxidase subunit II -
Anaeromyxobacter sp. Fw109-5
Length = 351
Score = 51.2 bits (117), Expect = 8e-06
Identities = 25/51 (49%), Positives = 32/51 (62%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS +P+L VK+DA PGR QT F + G + C+E CG HS
Sbjct: 141 TSRDVIHSFYVPALRVKMDALPGRYTQTWFQAEKAGRYEIFCTEYCGLGHS 191
>UniRef50_A0KDK6 Cluster: Cytochrome c, monohaem; n=22;
Burkholderia|Rep: Cytochrome c, monohaem - Burkholderia
cenocepacia (strain HI2424)
Length = 434
Score = 51.2 bits (117), Expect = 8e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+ DVIH+ +P L K PG+ N+ +RPG++ GQCS+ CGA H+
Sbjct: 262 SADVIHAFWVPQLAGKTQTIPGQTNRQWLQADRPGVYRGQCSQYCGAQHA 311
>UniRef50_Q60IM7 Cluster: Putative uncharacterized protein CBG24912;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG24912 - Caenorhabditis
briggsae
Length = 306
Score = 50.8 bits (116), Expect = 1e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +1
Query: 235 GIFFGQCSEICGANHSFIPIVIE 303
G+F+GQCSEICGANHSFIPI +E
Sbjct: 3 GVFYGQCSEICGANHSFIPIALE 25
>UniRef50_A3TK83 Cluster: Cytochrome c oxidase subunit 2; n=1;
Janibacter sp. HTCC2649|Rep: Cytochrome c oxidase
subunit 2 - Janibacter sp. HTCC2649
Length = 310
Score = 50.0 bits (114), Expect = 2e-05
Identities = 28/93 (30%), Positives = 42/93 (45%)
Frame = +1
Query: 4 FNNIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKV 183
FN +E D + + S I + + T+ DVIHS +P K+
Sbjct: 161 FNYVEGDVHEVGSQAIMTGQPGAEETIPTMYLPVGERTEFVLTSRDVIHSFWVPQFLQKL 220
Query: 184 DANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
D PG++N+ G F G+C+E+CGA HS
Sbjct: 221 DMIPGKVNKFQVVPTEEGTFKGKCAELCGAYHS 253
>UniRef50_A0VUI7 Cluster: Cytochrome c, monohaem; n=1;
Dinoroseobacter shibae DFL 12|Rep: Cytochrome c,
monohaem - Dinoroseobacter shibae DFL 12
Length = 345
Score = 50.0 bits (114), Expect = 2e-05
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+ DVIHS +PS+ K+D PGR N G F GQC+E CG +H
Sbjct: 173 SNDVIHSFWVPSISGKMDMIPGRTNTLTITATETGQFRGQCAEFCGLSH 221
>UniRef50_Q5V3P5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Haloarcula marismortui|Rep: Cytochrome c oxidase subunit
2 - Haloarcula marismortui (Halobacterium marismortui)
Length = 240
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/49 (48%), Positives = 28/49 (57%)
Frame = +1
Query: 136 TDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
TDVIH+ IP LGVK D PGR PG + C+E+CGA HS
Sbjct: 166 TDVIHAIYIPQLGVKQDIFPGRTMTARTHATEPGEYRLYCAEMCGAGHS 214
>UniRef50_Q3JAA7 Cluster: Cytochrome c oxidase, subunit II; n=1;
Nitrosococcus oceani ATCC 19707|Rep: Cytochrome c
oxidase, subunit II - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 352
Score = 49.2 bits (112), Expect = 3e-05
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPI 294
DVIHS +PSL K+D PGR+++ + G++ G C+E CG+ H+ + +
Sbjct: 182 DVIHSFWVPSLTGKMDMIPGRISRLTLKATKVGVYHGVCAEYCGSAHALMKL 233
>UniRef50_Q01R98 Cluster: Cytochrome c oxidase, subunit II; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome c oxidase,
subunit II - Solibacter usitatus (strain Ellin6076)
Length = 322
Score = 49.2 bits (112), Expect = 3e-05
Identities = 24/51 (47%), Positives = 30/51 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
TA DVIHS +PSL K D PGR ++PG + GQC+E CG H+
Sbjct: 150 TADDVIHSFWVPSLQGKRDLIPGRTTLEWMQADQPGEYRGQCAEFCGLQHA 200
>UniRef50_Q5P1W3 Cluster: Cytochrome c oxidase, subunit II; n=1;
Azoarcus sp. EbN1|Rep: Cytochrome c oxidase, subunit II
- Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
(strain EbN1))
Length = 310
Score = 48.8 bits (111), Expect = 4e-05
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
+ DV+HS +PSL K+D PG+ N+ P + GQC+E CG H+ + + +
Sbjct: 136 SADVLHSFWVPSLAGKLDLIPGKDNRLRLAATEPAVLRGQCAEYCGGPHAQMALFV 191
>UniRef50_Q2IK63 Cluster: Cytochrome c oxidase, subunit II; n=1;
Anaeromyxobacter dehalogenans 2CP-C|Rep: Cytochrome c
oxidase, subunit II - Anaeromyxobacter dehalogenans
(strain 2CP-C)
Length = 337
Score = 48.8 bits (111), Expect = 4e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+ATDVIHS +P +K DA PGR + F PG + C+E CG +HS
Sbjct: 152 SATDVIHSLYVPEFRLKQDAVPGRFTRLTFTPTVPGSYPILCAEYCGTDHS 202
>UniRef50_Q1NHI1 Cluster: Cytochrome c oxidase, subunit IIc; n=1;
Sphingomonas sp. SKA58|Rep: Cytochrome c oxidase,
subunit IIc - Sphingomonas sp. SKA58
Length = 322
Score = 48.8 bits (111), Expect = 4e-05
Identities = 23/53 (43%), Positives = 31/53 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
TA DVIHS IP L K+D PGR N+ + G + G C+E CG +H+ +
Sbjct: 152 TARDVIHSFWIPGLAGKMDMIPGRTNRLVVQAEKSGRYRGVCAEFCGLSHALM 204
>UniRef50_Q82AL0 Cluster: Probable cytochrome c oxidase subunit 2
precursor; n=2; Streptomyces|Rep: Probable cytochrome c
oxidase subunit 2 precursor - Streptomyces avermitilis
Length = 319
Score = 48.8 bits (111), Expect = 4e-05
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS + +K D PG N NR G F G+C+E+CG +HS
Sbjct: 221 TSRDVIHSFWVVPFLMKQDVIPGHTNSFQVTPNREGTFLGKCAELCGVDHS 271
>UniRef50_Q1YF16 Cluster: Cytochrome c oxidase subunit 2; n=4;
Alphaproteobacteria|Rep: Cytochrome c oxidase subunit 2
- Aurantimonas sp. SI85-9A1
Length = 355
Score = 48.4 bits (110), Expect = 6e-05
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIHS +P++ K DA PGR+N+ R G++ G C+E CG H+
Sbjct: 189 DVIHSFWVPAIAGKTDAIPGRVNRLVLEPTREGVYNGVCAEFCGDAHT 236
>UniRef50_Q6A9V8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Propionibacterium acnes|Rep: Cytochrome c oxidase
subunit 2 - Propionibacterium acnes
Length = 302
Score = 48.0 bits (109), Expect = 7e-05
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+ DVIHS +P+ K+D PG NQ + R G++ G+C+E+CG H+
Sbjct: 203 SADVIHSFWVPAFYFKMDVIPGHPNQFDLTPTRIGVYDGKCAELCGTYHA 252
>UniRef50_A4FAC2 Cluster: Cytochrome c oxidase subunit 2; n=1;
Saccharopolyspora erythraea NRRL 2338|Rep: Cytochrome c
oxidase subunit 2 - Saccharopolyspora erythraea (strain
NRRL 23338)
Length = 302
Score = 48.0 bits (109), Expect = 7e-05
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 5/58 (8%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDA--NPGRLNQTNFF---INRPGIFFGQCSEICGANHSFI 288
++TDVIHS +P K D +P + NQ N F I+R G F G+C+E+CG HS +
Sbjct: 174 SSTDVIHSFFVPEFHFKRDTFPHPDKNNQDNVFQNTIDREGSFVGRCAELCGTYHSMM 231
>UniRef50_Q2YBV3 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Nitrosospira multiformis ATCC 25196|Rep:
Cytochrome c oxidase, subunit II precursor -
Nitrosospira multiformis (strain ATCC 25196 / NCIMB
11849)
Length = 353
Score = 47.6 bits (108), Expect = 1e-04
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
+ DVIH+ +P L K PG +NQ + PGI+ GQC++ CGA H+ + + +
Sbjct: 184 SADVIHAFWVPVLAGKTQMIPGLVNQKWIQADVPGIYAGQCAQFCGAAHAHMNLEV 239
>UniRef50_A4A2K3 Cluster: Cytochrome c oxidase subunit 2; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit 2 - Blastopirellula marina DSM 3645
Length = 337
Score = 47.6 bits (108), Expect = 1e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+ DVIHS +P L K D P + N+ N GI+ G+C+E CG H+
Sbjct: 168 SADVIHSFWVPKLAGKTDLVPAKTNRMRLEANAAGIYEGRCAEYCGTQHA 217
>UniRef50_A1SLF8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Nocardioides sp. JS614|Rep: Cytochrome c oxidase subunit
2 - Nocardioides sp. (strain BAA-499 / JS614)
Length = 324
Score = 46.8 bits (106), Expect = 2e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIH ++P+ +K+D PGR+N R G + G+C E+CG HS
Sbjct: 222 DVIHDLSVPAFLLKMDVVPGRVNHYEITPTRIGEYAGKCFELCGVYHS 269
>UniRef50_Q3E3Q0 Cluster: Cytochrome c oxidase subunit 2; n=2;
Chloroflexus|Rep: Cytochrome c oxidase subunit 2 -
Chloroflexus aurantiacus J-10-fl
Length = 330
Score = 46.4 bits (105), Expect = 2e-04
Identities = 23/53 (43%), Positives = 29/53 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ DVIHS IP+ VK D PGR F +PG + C+E CG HS +
Sbjct: 137 TSQDVIHSFYIPAFRVKQDVLPGRYTIMWFEATKPGEYHLFCAEYCGTEHSLM 189
>UniRef50_Q1J1C4 Cluster: Cytochrome c oxidase subunit 2; n=1;
Deinococcus geothermalis DSM 11300|Rep: Cytochrome c
oxidase subunit 2 - Deinococcus geothermalis (strain DSM
11300)
Length = 435
Score = 46.4 bits (105), Expect = 2e-04
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIH+ P+LG + DA PG +R G++ G C+ +CGA+H+
Sbjct: 203 TSGDVIHAFWAPNLGGQRDATPGTQKTWQIQTDRAGVYQGNCNVLCGASHA 253
>UniRef50_Q11EK7 Cluster: Cytochrome c oxidase, subunit II
precursor; n=3; Rhizobiales|Rep: Cytochrome c oxidase,
subunit II precursor - Mesorhizobium sp. (strain BNC1)
Length = 330
Score = 46.4 bits (105), Expect = 2e-04
Identities = 21/54 (38%), Positives = 29/54 (53%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
+VIHS P + K+D PGR N+ PGI GQC+E CG H+ + +
Sbjct: 160 NVIHSFWAPQIAGKLDMIPGRTNEVVVEATAPGISRGQCAEYCGGAHALMAFYV 213
>UniRef50_Q8F9F3 Cluster: Cytochrome c oxidase subunit 2; n=5;
Bacteria|Rep: Cytochrome c oxidase subunit 2 -
Leptospira interrogans
Length = 333
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DV+HS +P+ K+DA PGR F G F C+E CG +HS
Sbjct: 158 TSQDVLHSFYVPAFRNKMDAIPGRYTTLTFTPTEKGDFVVYCTEFCGTSHS 208
>UniRef50_Q01PD2 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Solibacter usitatus Ellin6076|Rep:
Cytochrome c oxidase, subunit II precursor - Solibacter
usitatus (strain Ellin6076)
Length = 341
Score = 46.0 bits (104), Expect = 3e-04
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ D HS +P L K D P R+N + PG++ GQC++ CG H+
Sbjct: 171 TSADTDHSFWVPRLAGKTDLIPNRVNTMWIDPHEPGLYLGQCAQYCGTQHA 221
>UniRef50_A7BSH7 Cluster: Cytochrome c oxidase aa3, subunit II; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
II - Beggiatoa sp. PS
Length = 256
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ D +HS IP VK D+ PGR+ F+ PG C+E CG HS++
Sbjct: 168 TSRDTLHSHFIPDFRVKEDSMPGRITYLWFYPQEPGEHQVTCAEYCGIMHSYM 220
>UniRef50_Q8ZXD0 Cluster: Cytochrome c oxidase subunit 2; n=3;
Pyrobaculum|Rep: Cytochrome c oxidase subunit 2 -
Pyrobaculum aerophilum
Length = 149
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/50 (40%), Positives = 30/50 (60%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T++DV+HS I LG K D PG + +++PG++ C+E CGA H
Sbjct: 89 TSSDVVHSFYIRELGYKYDTVPGFVYTAWLKVDKPGVYNVLCAEFCGAGH 138
>UniRef50_Q9F3S9 Cluster: Cytochrome c oxidase subunit 2; n=2;
Sphingobacteriales genera incertae sedis|Rep: Cytochrome
c oxidase subunit 2 - Rhodothermus marinus (Rhodothermus
obamensis)
Length = 316
Score = 45.6 bits (103), Expect = 4e-04
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS +P+ VK D P R + F RPG + C+E CG HS
Sbjct: 143 TSVDVIHSFYVPAFRVKQDVLPDRYSALWFEATRPGEYTVFCTEYCGTQHS 193
>UniRef50_Q7NIL9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Gloeobacter violaceus|Rep: Cytochrome c oxidase subunit
2 - Gloeobacter violaceus
Length = 308
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS--FIPIVIE 303
+ DVIH+ +P +K D PGR Q +F + G + +C+E+CGA H + +++E
Sbjct: 193 SNDVIHAFWVPEFRLKQDVIPGRTTQVSFTPTKAGKYQLRCAELCGAYHGGMVVDVIVE 251
>UniRef50_A0JX27 Cluster: Cytochrome c oxidase, subunit II
precursor; n=3; Actinobacteria (class)|Rep: Cytochrome c
oxidase, subunit II precursor - Arthrobacter sp. (strain
FB24)
Length = 290
Score = 45.2 bits (102), Expect = 5e-04
Identities = 20/48 (41%), Positives = 28/48 (58%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIHS +P+ K D PG+ N F + G + G+C+E+CG HS
Sbjct: 199 DVIHSFWVPAFLQKRDMIPGKTNYIRFTPTKEGTYDGKCAELCGEYHS 246
>UniRef50_Q8YU45 Cluster: Cytochrome c oxidase subunit 2; n=7;
Cyanobacteria|Rep: Cytochrome c oxidase subunit 2 -
Anabaena sp. (strain PCC 7120)
Length = 327
Score = 44.8 bits (101), Expect = 7e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+A DVIHS +P +K DA PG + F +PG + C+E+CG H
Sbjct: 208 SAQDVIHSFWVPQFRLKQDAIPGVPTELRFVATKPGTYPVVCAELCGGYH 257
>UniRef50_Q47R64 Cluster: Cytochrome c oxidase subunit II precursor;
n=1; Thermobifida fusca YX|Rep: Cytochrome c oxidase
subunit II precursor - Thermobifida fusca (strain YX)
Length = 314
Score = 44.8 bits (101), Expect = 7e-04
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGI---FFGQCSEICGANHS 282
A DVIHS IP+ K+D PG N+ I +PG+ + G+C+E+CG +HS
Sbjct: 191 APDVIHSFWIPAFAFKLDVIPGHPNEFQVKI-KPGVEGDYEGRCAELCGYDHS 242
>UniRef50_Q46SU8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Ralstonia eutropha JMP134|Rep: Cytochrome c oxidase
subunit 2 - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 316
Score = 44.8 bits (101), Expect = 7e-04
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS +P+ +K D PGR F G++ C+E CG +H+
Sbjct: 138 TSQDVIHSFYVPAFRIKQDVVPGRYTTLRFTATHAGVYRLFCAEYCGTDHA 188
>UniRef50_Q72B26 Cluster: Cytochrome c oxidase subunit 2; n=3;
Desulfovibrio|Rep: Cytochrome c oxidase subunit 2 -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 426
Score = 44.0 bits (99), Expect = 0.001
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+ DVIHS IP+ +K+D PG F + PG F C+E CG H+ + V++
Sbjct: 129 TSVDVIHSLYIPAFRIKMDTVPGMQTYAWFKTDGPGEFDILCAEYCGLKHANMLSVVK 186
>UniRef50_Q93TC7 Cluster: Cytochrome c oxidase subunit II; n=1;
Cyanothece sp. ATCC 51142|Rep: Cytochrome c oxidase
subunit II - Cyanothece (strain ATCC 51142)
Length = 191
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/56 (41%), Positives = 32/56 (57%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
A DV+H+ +P L +K DA PGR F NR G + C+E+CGA H + V+
Sbjct: 70 AGDVLHAFWVPQLRLKQDAIPGREAVLAFTANREGDYPIICAELCGAYHGGMKSVL 125
>UniRef50_A5UVI9 Cluster: Cytochrome c oxidase, subunit II
precursor; n=2; Roseiflexus|Rep: Cytochrome c oxidase,
subunit II precursor - Roseiflexus sp. RS-1
Length = 367
Score = 44.0 bits (99), Expect = 0.001
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
DVIH+ +P L K PG+ N F ++PGI+ C+E CG H+ +
Sbjct: 171 DVIHNFWVPKLAGKTYMIPGKTNFLTFTADQPGIYRAVCAEFCGEAHALM 220
>UniRef50_Q5V5S7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Haloarcula marismortui|Rep: Cytochrome c oxidase subunit
2 - Haloarcula marismortui (Halobacterium marismortui)
Length = 253
Score = 43.6 bits (98), Expect = 0.002
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ D +H+ +P LG+K DA PG+ N+ G + C+E CG+ HS
Sbjct: 171 TSRDWLHAFHVPGLGLKSDAFPGQYNRLRTNAGNTGTYQLYCAEYCGSGHS 221
>UniRef50_A5PDP5 Cluster: Putative cytochrome c oxidase chain II
protein; n=1; Erythrobacter sp. SD-21|Rep: Putative
cytochrome c oxidase chain II protein - Erythrobacter
sp. SD-21
Length = 352
Score = 43.2 bits (97), Expect = 0.002
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIV 297
+ DVIHS +P L K D PGR +R G + G C+E CG H+ + V
Sbjct: 148 SADVIHSFWVPHLSGKKDMIPGRRTLLRIEADRAGEYGGVCAEYCGRQHALMGFV 202
>UniRef50_Q81MT9 Cluster: Cytochrome c oxidase subunit 2; n=15;
Bacillus|Rep: Cytochrome c oxidase subunit 2 - Bacillus
anthracis
Length = 349
Score = 42.7 bits (96), Expect = 0.003
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
D+ HS +PSL K+D N +N+ ++ G + G C+E CG +HS + ++
Sbjct: 172 DIKHSFWVPSLAGKMDTNTDNVNKMWLKADKSGTYNGFCTEFCGPSHSLMQFKVK 226
>UniRef50_O67934 Cluster: Cytochrome c oxidase subunit 2; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit 2 -
Aquifex aeolicus
Length = 236
Score = 42.7 bits (96), Expect = 0.003
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIHS + + D PGR F IN+PG ++ C E CG HS
Sbjct: 151 TSMDVIHSFFVLPARITEDMVPGRTTYLWFQINKPGEYWVFCREYCGTGHS 201
>UniRef50_Q0LFY7 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Herpetosiphon aurantiacus ATCC
23779|Rep: Cytochrome c oxidase, subunit II precursor -
Herpetosiphon aurantiacus ATCC 23779
Length = 359
Score = 42.7 bits (96), Expect = 0.003
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 5/58 (8%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFIN-----RPGIFFGQCSEICGANHSFI 288
T+ DVIH IP L K D P R + F + P +F+GQC+E CG H+++
Sbjct: 176 TSVDVIHDFWIPGLAGKRDVMPNRESGLWFKADDVADGSPAVFWGQCAEYCGGQHAYM 233
>UniRef50_A6GFM7 Cluster: Cytochrome c oxidase subunit 2; n=1;
Plesiocystis pacifica SIR-1|Rep: Cytochrome c oxidase
subunit 2 - Plesiocystis pacifica SIR-1
Length = 339
Score = 42.7 bits (96), Expect = 0.003
Identities = 24/57 (42%), Positives = 29/57 (50%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
T+ DVIHS IP+ VK D PGR F G F C+E CG HS + V+
Sbjct: 163 TSKDVIHSFYIPAFRVKKDVVPGRYTYVWFEATELGDFPVFCTEYCGDEHSSMLAVV 219
>UniRef50_A6C0L0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit 2 - Planctomyces maris DSM 8797
Length = 277
Score = 42.7 bits (96), Expect = 0.003
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV HS +P+L +K DA PG F N+PG++ C+E+CG H
Sbjct: 184 DVQHSFFLPALRIKQDALPGLQIPVWFEANKPGVYDLVCAELCGWGH 230
>UniRef50_Q06474 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=5; Cyanobacteria|Rep: Cytochrome c oxidase subunit 2
precursor (EC 1.9.3.1) (Cytochrome c oxidase polypeptide
II) (Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2)
- Synechocystis sp. (strain PCC 6803)
Length = 332
Score = 42.7 bits (96), Expect = 0.003
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
A DVIH+ IP L +K D PGR + F + PG + C+E+CGA H
Sbjct: 209 AGDVIHAFWIPQLRLKQDVIPGRGSTLVFNASTPGQYPVICAELCGAYH 257
>UniRef50_P24011 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Caa-3605 subunit 2) (Oxidase
aa(3) subunit 2); n=8; Bacillaceae|Rep: Cytochrome c
oxidase subunit 2 precursor (EC 1.9.3.1) (Cytochrome c
oxidase polypeptide II) (Cytochrome aa3 subunit 2)
(Caa-3605 subunit 2) (Oxidase aa(3) subunit 2) -
Bacillus subtilis
Length = 356
Score = 42.7 bits (96), Expect = 0.003
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPG--------IFFGQCSEICGANHSFI 288
A+DV HS IPS+G K+D N N+ FF+ +FFG+C+E+CG +H+ +
Sbjct: 171 ASDVKHSFWIPSVGGKLDTNTD--NENKFFLTFDSKRSKEAGDMFFGKCAELCGPSHALM 228
Query: 289 PIVIE 303
++
Sbjct: 229 DFKVK 233
>UniRef50_A5NRY5 Cluster: Cytochrome c, monohaem; n=5;
Alphaproteobacteria|Rep: Cytochrome c, monohaem -
Methylobacterium sp. 4-46
Length = 620
Score = 42.3 bits (95), Expect = 0.004
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIHS +P+ +K D PG+ + F + G+F C+E CG +HS
Sbjct: 448 DVIHSFFVPAFRLKQDVVPGQTHVAWFEATKLGVFHLLCAEYCGTDHS 495
>UniRef50_A5NQP7 Cluster: Cytochrome c oxidase, subunit II; n=1;
Methylobacterium sp. 4-46|Rep: Cytochrome c oxidase,
subunit II - Methylobacterium sp. 4-46
Length = 322
Score = 42.3 bits (95), Expect = 0.004
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV+H +P K+D PG + F R G F C+E+CG NH
Sbjct: 227 DVVHDFYVPEFRAKMDVIPGTVTYFWFTPTRTGAFDAICNEVCGVNH 273
>UniRef50_A7D7L0 Cluster: Nitrous-oxide reductase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Nitrous-oxide reductase -
Halorubrum lacusprofundi ATCC 49239
Length = 699
Score = 42.3 bits (95), Expect = 0.004
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +1
Query: 52 KNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINR 231
+ NE+ +V T +DVIHS IP + + P + F ++
Sbjct: 611 RRNEYAFPEVTLQEGDEVTLRISNVETTSDVIHSIAIPEYDINLALAPQDTREVTFTADQ 670
Query: 232 PGIFFGQCSEICGANH 279
PG+F+ C+ C A H
Sbjct: 671 PGVFWAYCAYFCSALH 686
>UniRef50_UPI0000164D05 Cluster: cytochrome c oxidase, subunit II;
n=1; Deinococcus radiodurans R1|Rep: cytochrome c
oxidase, subunit II - Deinococcus radiodurans R1
Length = 334
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DVIH P+LG + + P RPG++ G CS++CGA+H+
Sbjct: 212 TSKDVIHGFWAPNLGGQRASIPTVKRVWELDTQRPGVYQGNCSQLCGASHA 262
>UniRef50_Q39Z27 Cluster: Cytochrome c oxidase, subunit II
precursor; n=2; Geobacter|Rep: Cytochrome c oxidase,
subunit II precursor - Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210)
Length = 302
Score = 41.9 bits (94), Expect = 0.005
Identities = 20/48 (41%), Positives = 25/48 (52%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIH +P+ VK D PG N F ++PG + CS CG HS
Sbjct: 133 DVIHGFYVPAFRVKHDVVPGMKNHVWFVADKPGTYDLFCSVYCGLGHS 180
>UniRef50_Q9HRJ9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Halobacterium salinarum|Rep: Cytochrome c oxidase
subunit 2 - Halobacterium salinarium (Halobacterium
halobium)
Length = 255
Score = 41.9 bits (94), Expect = 0.005
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
+ DVIH+ P LG+K+DA PG+ N G + C+E CGA HS
Sbjct: 178 SNDVIHAFHAPELGLKMDALPGQQNHLVTNDLDEGTYQLYCAEFCGAGHS 227
>UniRef50_Q6KZG1 Cluster: Cytochrome c oxidase polypeptide II; n=2;
Thermoplasmatales|Rep: Cytochrome c oxidase polypeptide
II - Picrophilus torridus
Length = 272
Score = 41.9 bits (94), Expect = 0.005
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ DV+HS + ++ KVDA PG N I PG+++ +C E+CG H+
Sbjct: 166 TSVDVMHSFYLINV-TKVDAFPGHYNFIWTNITTPGLYYFECVELCGLGHA 215
>UniRef50_Q59825 Cluster: Cytochrome oxidase subunit 2; n=4;
Sulfolobaceae|Rep: Cytochrome oxidase subunit 2 -
Sulfolobus acidocaldarius
Length = 146
Score = 41.9 bits (94), Expect = 0.005
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DVIH+ IP LG K +A PG + + PG + C+E CG H
Sbjct: 89 DVIHAFYIPQLGFKFEAIPGYVYDFYIVVKTPGTYDIWCAEFCGPGH 135
>UniRef50_Q9KEV9 Cluster: Cytochrome c oxidase subunit 2; n=2;
Bacillaceae|Rep: Cytochrome c oxidase subunit 2 -
Bacillus halodurans
Length = 157
Score = 41.5 bits (93), Expect = 0.006
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
T+TDV HS +I + V + PG ++ + G + C+E CGA H ++ + IE
Sbjct: 96 TSTDVTHSFSIVNTNVNMMVVPGLISTKEYTFKETGHYLIVCNEYCGAGHHYMSMEIE 153
>UniRef50_Q8YYA1 Cluster: Cytochrome c oxidase subunit 2; n=5;
Nostocaceae|Rep: Cytochrome c oxidase subunit 2 -
Anabaena sp. (strain PCC 7120)
Length = 355
Score = 41.5 bits (93), Expect = 0.006
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TA DVIH+ +P +K DA PGR + F G + C+E+CG H
Sbjct: 240 TANDVIHAFWVPEFRLKQDAIPGRQTEMRFTPKVAGDYTLICAELCGPYH 289
>UniRef50_Q7NMM6 Cluster: Cytochrome c oxidase subunit 2; n=1;
Gloeobacter violaceus|Rep: Cytochrome c oxidase subunit
2 - Gloeobacter violaceus
Length = 319
Score = 41.5 bits (93), Expect = 0.006
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TA DVIH +P +K D PGR + +R G + C+++CG H
Sbjct: 206 TAKDVIHGFWVPEFRLKQDIIPGRTTEIRLLPDRVGEYVLHCTQLCGTYH 255
>UniRef50_A0YDD6 Cluster: Cytochrome c oxidase subunit 2; n=2;
Bacteria|Rep: Cytochrome c oxidase subunit 2 - marine
gamma proteobacterium HTCC2143
Length = 450
Score = 41.5 bits (93), Expect = 0.006
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV+H+ T+P VK+D PG +++ F R G F C E+CG H
Sbjct: 187 DVLHNFTVPQFRVKMDLVPGTISKLWFTPTREGRFDILCMELCGIAH 233
>UniRef50_A0LTG9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Acidothermus cellulolyticus 11B|Rep: Cytochrome c
oxidase subunit 2 - Acidothermus cellulolyticus (strain
ATCC 43068 / 11B)
Length = 280
Score = 41.5 bits (93), Expect = 0.006
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFIN--RPGIFFGQCSEICGANH 279
DVIH+ +P+ K D PGR+++ + I+ + G + G+C+E+CG H
Sbjct: 200 DVIHAFWVPNFLFKRDVIPGRMSEFDVHIDADKQGTYIGRCTELCGLYH 248
>UniRef50_A7HEB6 Cluster: Cytochrome c oxidase subunit II; n=1;
Anaeromyxobacter sp. Fw109-5|Rep: Cytochrome c oxidase
subunit II - Anaeromyxobacter sp. Fw109-5
Length = 272
Score = 41.1 bits (92), Expect = 0.009
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+ DVIHS +P VK DA PG + + F G + C++ CG NH
Sbjct: 177 SVDVIHSFNLPHFRVKRDAVPGEITRLTFQARTAGEYEIACAQHCGPNH 225
>UniRef50_A6WD34 Cluster: Cytochrome c oxidase subunit II precursor;
n=1; Kineococcus radiotolerans SRS30216|Rep: Cytochrome
c oxidase subunit II precursor - Kineococcus
radiotolerans SRS30216
Length = 324
Score = 41.1 bits (92), Expect = 0.009
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
A DV HS +P+ +K+D G N + G F G+C+E+CG HS
Sbjct: 210 ARDVNHSFWVPAFLMKMDLIAGSPNHFQVTPTKEGTFLGECAELCGEYHS 259
>UniRef50_Q1IMA3 Cluster: Cytochrome c oxidase subunit 2; n=2;
Acidobacteria|Rep: Cytochrome c oxidase subunit 2 -
Acidobacteria bacterium (strain Ellin345)
Length = 329
Score = 40.7 bits (91), Expect = 0.011
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
++ DVIH +P+ VK D PGR + F + G + C++ CG HS
Sbjct: 137 SSQDVIHDFFVPAFRVKADVLPGRYSVVWFHPTKAGTYHLFCAQYCGTQHS 187
>UniRef50_A1G711 Cluster: Cytochrome c oxidase subunit 2; n=2;
Salinispora|Rep: Cytochrome c oxidase subunit 2 -
Salinispora arenicola CNS205
Length = 323
Score = 40.7 bits (91), Expect = 0.011
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINR---PGIFFGQCSEICGANHSFI 288
T+ DVIHS +P + K D PG + F ++ G + G+C+E+CG H+F+
Sbjct: 205 TSRDVIHSFWVPEMLFKRDVFPGSIRNV-FEVSELEGEGAYVGRCAELCGTYHAFM 259
>UniRef50_UPI0000510271 Cluster: COG1622: Heme/copper-type
cytochrome/quinol oxidases, subunit 2; n=1;
Brevibacterium linens BL2|Rep: COG1622: Heme/copper-type
cytochrome/quinol oxidases, subunit 2 - Brevibacterium
linens BL2
Length = 290
Score = 39.5 bits (88), Expect = 0.026
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIHS +P+ K D PG + + G + G+C+E+CG HS
Sbjct: 197 DVIHSFWVPAFLEKRDMIPGHDQSLHLRAEKEGEYVGKCAELCGEYHS 244
>UniRef50_Q83GL9 Cluster: Cytochrome c oxidase subunit 2; n=2;
Tropheryma whipplei|Rep: Cytochrome c oxidase subunit 2
- Tropheryma whipplei (strain Twist) (Whipple's
bacillus)
Length = 290
Score = 39.5 bits (88), Expect = 0.026
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DV+HS I K D PG N+ F R G + G+C+E CG HS + V++
Sbjct: 201 DVVHSFWIIDFLYKRDIVPGLTNRIYFTPTRIGEYRGKCAEFCGEFHSAMLFVVK 255
>UniRef50_P98054 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=2; Chroococcales|Rep: Cytochrome c oxidase subunit 2
precursor (EC 1.9.3.1) (Cytochrome c oxidase polypeptide
II) (Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2)
- Synechococcus vulcanus (Thermosynechococcus vulcanus)
Length = 327
Score = 39.1 bits (87), Expect = 0.034
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+A DVIHS +P +K DA PG + T F + G + C+E+CG H
Sbjct: 215 SARDVIHSFWVPQFRLKQDAIPG-VPTTRFKATKVGTYPVVCAELCGGYH 263
>UniRef50_P63855 Cluster: Cytochrome c oxidase subunit 2 precursor;
n=19; Corynebacterineae|Rep: Cytochrome c oxidase
subunit 2 precursor - Mycobacterium bovis
Length = 363
Score = 39.1 bits (87), Expect = 0.034
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDA--NPGRLNQTNFF----INRPGIFFGQCSEICGANHSFI 288
+ DVIH+ +P K D NP N N F I + G F G C+E+CG HS +
Sbjct: 249 SADVIHAFWVPEFLFKRDVMPNPVANNSVNVFQIEEITKTGAFVGHCAEMCGTYHSMM 306
>UniRef50_Q3JBQ1 Cluster: Cytochrome c oxidase subunit 2; n=1;
Nitrosococcus oceani ATCC 19707|Rep: Cytochrome c
oxidase subunit 2 - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 211
Score = 38.7 bits (86), Expect = 0.046
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
DVIHS IP+ +K D PGR + F + G + C+E CG +HS
Sbjct: 143 DVIHSFFIPAFRIKHDVLPGRYSTIWFRPIKLGEYHLFCAEYCGTDHS 190
>UniRef50_Q31JY7 Cluster: Cytochrome c oxidase subunit II precursor;
n=2; Synechococcus elongatus|Rep: Cytochrome c oxidase
subunit II precursor - Synechococcus sp. (strain PCC
7942) (Anacystis nidulans R2)
Length = 315
Score = 38.7 bits (86), Expect = 0.046
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
A DVIH+ +P +K DA PG + F + G + C+E+CG+ H
Sbjct: 208 AQDVIHAFWVPQFRLKQDAIPGERTRLQFTPTQLGTYPIVCAELCGSYH 256
>UniRef50_A5CS34 Cluster: Cytochrome c oxidase subunit 2; n=2;
Microbacteriaceae|Rep: Cytochrome c oxidase subunit 2 -
Clavibacter michiganensis subsp. michiganensis (strain
NCPPB 382)
Length = 303
Score = 38.7 bits (86), Expect = 0.046
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
D +HS + K D G+ N F + G + G+C+E+CG HS +
Sbjct: 202 DTLHSFWVVDFLYKKDLISGKTNYMTFIPEKEGTYMGKCAELCGEYHSLM 251
>UniRef50_Q74GM4 Cluster: Cytochrome c oxidase subunit 2; n=2;
Desulfuromonadales|Rep: Cytochrome c oxidase subunit 2 -
Geobacter sulfurreducens
Length = 288
Score = 38.3 bits (85), Expect = 0.060
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
DV+H IP+ VK D PG N F + G + CS CG HS + +E
Sbjct: 117 DVLHGFYIPAFRVKRDVVPGMKNHVWFVAPKAGSYDIFCSVYCGTGHSAMITTVE 171
>UniRef50_Q9Z606 Cluster: Quinol oxidase subunit II; n=6;
Rhodobacteraceae|Rep: Quinol oxidase subunit II -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 261
Score = 38.3 bits (85), Expect = 0.060
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DVIHS +P L K+DA PG +N PG + G +E G +
Sbjct: 188 TSADVIHSFWVPRLAGKMDAIPGHVNLLRIEARVPGDYAGVSAEFSGPGY 237
>UniRef50_Q30I96 Cluster: Cytochrome c oxidase subunit 2; n=3;
Melanoplinae|Rep: Cytochrome c oxidase subunit 2 -
Neopedies brunneri
Length = 119
Score = 38.3 bits (85), Expect = 0.060
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINR 231
+A++ +HS +P LGV +DA P RLN+ F +NR
Sbjct: 86 SASEXLHSWALPXLGVTIDATPVRLNRGTFTMNR 119
>UniRef50_Q9YDX7 Cluster: Heme-copper oxidase subunit 2; n=2;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit 2 -
Aeropyrum pernix
Length = 234
Score = 38.3 bits (85), Expect = 0.060
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFI-NRPG-IFFGQCSEICGANHSFI 288
T+ DV H+ IP K+DA PG LN + PG ++ C E+CG HS +
Sbjct: 145 TSRDVFHAFGIPEFKNKIDAIPGILNSMWIKTPDEPGKVYNAYCYELCGIGHSLM 199
>UniRef50_P98052 Cluster: Cytochrome c oxidase subunit 2 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome c ba(3) subunit II); n=3; Thermus
thermophilus|Rep: Cytochrome c oxidase subunit 2 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome c ba(3) subunit II) - Thermus thermophilus
Length = 135
Score = 37.9 bits (84), Expect = 0.080
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DVIH + + V+ PG ++ + RPG + C++ CG H
Sbjct: 75 TSPDVIHGFHVEGTNINVEVLPGEVSTVRYTFKRPGEYRIICNQYCGLGH 124
>UniRef50_Q5V2Z8 Cluster: Cytochrome c oxidase subunit II; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit II -
Haloarcula marismortui (Halobacterium marismortui)
Length = 190
Score = 37.5 bits (83), Expect = 0.11
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DV+H ++ + PG++++ + N PG + C E CGA H
Sbjct: 104 TSADVVHGFSVVETNINTMVIPGQVSEVSARFNEPGTYGLICHEYCGAAH 153
>UniRef50_Q8EQF5 Cluster: Cytochrome c oxidase (Bo3-type) subunit
II; n=4; Bacillaceae|Rep: Cytochrome c oxidase
(Bo3-type) subunit II - Oceanobacillus iheyensis
Length = 167
Score = 36.7 bits (81), Expect = 0.18
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 136 TDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVIE 303
TDVIH I V + PG ++ +N G F C+E CG H + +E
Sbjct: 109 TDVIHGFNIAGTNVNMMVEPGYVSSMEVQMNNVGEFTLLCNEYCGVGHHMMFTTVE 164
>UniRef50_Q2JUD7 Cluster: Cytochrome c oxidase subunit 2; n=2;
Synechococcus|Rep: Cytochrome c oxidase subunit 2 -
Synechococcus sp. (strain JA-3-3Ab) (Cyanobacteria
bacteriumYellowstone A-Prime)
Length = 342
Score = 36.7 bits (81), Expect = 0.18
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TA DV H+ +P +K D PGR F + G + C+E+CG H
Sbjct: 199 TALDVNHAFWVPQFRLKQDLIPGRETHLEFVPTQLGTYPIVCAELCGPYH 248
>UniRef50_O67936 Cluster: Cytochrome c oxidase subunit II; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit II -
Aquifex aeolicus
Length = 85
Score = 36.7 bits (81), Expect = 0.18
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DV+H I V A PG + +PG++ C E CG H
Sbjct: 26 TSKDVVHGVHIHGTNYNVMAIPGTVGYMRIKFEKPGVYHVVCHEFCGVGH 75
>UniRef50_P98053 Cluster: Alternative cytochrome c oxidase subunit 2
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide II) (Cytochrome BB3 subunit 2) (Oxidase
BB(3) subunit 2); n=19; Proteobacteria|Rep: Alternative
cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Alternative
cytochrome c oxidase polypeptide II) (Cytochrome BB3
subunit 2) (Oxidase BB(3) subunit 2) - Bradyrhizobium
japonicum
Length = 277
Score = 36.7 bits (81), Expect = 0.18
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFIN--RPGIFFGQCSEICGANH 279
+ DV+H +P K+D PG + T F+I R G F C+E+CGA H
Sbjct: 185 SVDVLHDFYVPEFRAKMDMVPGMV--TYFWIRPIRTGTFDVLCAELCGAAH 233
>UniRef50_Q46TC8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Ralstonia eutropha JMP134|Rep: Cytochrome c oxidase
subunit 2 - Ralstonia eutropha (strain JMP134)
(Alcaligenes eutrophus)
Length = 124
Score = 36.3 bits (80), Expect = 0.24
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TA DV+ ++P LG++VD PG+ + G C CG+ H
Sbjct: 65 TAVDVVMGFSVPDLGIRVDLPPGKTVEVPINAAAAGSHLFLCDIFCGSGH 114
>UniRef50_Q1J2G4 Cluster: Cytochrome c oxidase, subunit II; n=1;
Deinococcus geothermalis DSM 11300|Rep: Cytochrome c
oxidase, subunit II - Deinococcus geothermalis (strain
DSM 11300)
Length = 186
Score = 36.3 bits (80), Expect = 0.24
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DV+H + + V A PG++ + +PG C+E CG H
Sbjct: 122 TSADVMHGYEVAGTNINVTAIPGQVTSFSTTFRQPGTHTTLCNEYCGIGH 171
>UniRef50_Q6LKC1 Cluster: Hypothetical cytochrome c oxidase subunit
II; n=2; Photobacterium profundum|Rep: Hypothetical
cytochrome c oxidase subunit II - Photobacterium
profundum (Photobacterium sp. (strain SS9))
Length = 368
Score = 35.9 bits (79), Expect = 0.32
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV+H +P K+D PG ++ F + G + C+E+CG H
Sbjct: 190 DVLHDFNVPQFRAKMDLVPGTVSYIWFTPTKRGSYEILCAELCGVGH 236
>UniRef50_Q01UX9 Cluster: Cytochrome c oxidase subunit 2; n=1;
Solibacter usitatus Ellin6076|Rep: Cytochrome c oxidase
subunit 2 - Solibacter usitatus (strain Ellin6076)
Length = 261
Score = 35.9 bits (79), Expect = 0.32
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DVIH+ + L +K D PG +F + G++ CSE+CG H
Sbjct: 189 DVIHNFFVRELRMKQDIVPGMEIPLSFTADTVGVYEVPCSELCGLGH 235
>UniRef50_A3I8G1 Cluster: Cytochrome c oxidase (B(O/a)3-type) chain
II; n=2; Bacillus|Rep: Cytochrome c oxidase
(B(O/a)3-type) chain II - Bacillus sp. B14905
Length = 163
Score = 35.9 bits (79), Expect = 0.32
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFI 288
T+ DV+H + + + PG +++ +N+ G F C+E CG H+ +
Sbjct: 98 TSEDVMHGFEVAGTNINMMLEPGYISEYVTVVNKVGEFLIVCNEYCGTGHTMM 150
>UniRef50_Q8XQB8 Cluster: Nitrous-oxide reductase precursor (EC
1.7.99.6) (N(2)OR); n=82; Bacteria|Rep: Nitrous-oxide
reductase precursor (EC 1.7.99.6) (N(2)OR) - Ralstonia
solanacearum (Pseudomonas solanacearum)
Length = 646
Score = 35.9 bits (79), Expect = 0.32
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
D+ H IP + NP F ++PG+F+ C+ C A H
Sbjct: 589 DLTHGFAIPKYDINFIVNPQETASVTFIADKPGVFWCYCTHFCHALH 635
>UniRef50_A5URT9 Cluster: Cytochrome c oxidase, subunit II; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit II -
Roseiflexus sp. RS-1
Length = 168
Score = 35.5 bits (78), Expect = 0.42
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DVIH I + + + PG++++ + PG ++ C E CG H
Sbjct: 100 TSRDVIHGYKIENTPINMMVIPGQISRMTTTFDTPGEYYIFCHEYCGGGH 149
>UniRef50_A3ZTG0 Cluster: Cytochrome c oxidase subunit 2; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit 2 - Blastopirellula marina DSM 3645
Length = 252
Score = 35.5 bits (78), Expect = 0.42
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV+HS +P++ VK D PG F + G+ C+E+CG H
Sbjct: 168 DVLHSFFLPNMRVKQDVVPGMRQYVWFHPVKEGVSDIVCAELCGWGH 214
>UniRef50_O30093 Cluster: Cytochrome C oxidase, subunit II; n=1;
Archaeoglobus fulgidus|Rep: Cytochrome C oxidase,
subunit II - Archaeoglobus fulgidus
Length = 126
Score = 35.5 bits (78), Expect = 0.42
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
A DV H IPSLG+ G+ F+ + G++ CS C H F+ +I
Sbjct: 68 AADVTHGIFIPSLGINELIPAGKEVVVEFYAEKEGVYPFMCSVYCSPYHRFMRGII 123
>UniRef50_Q4ZGT0 Cluster: Nitrous oxide reductase; n=19;
environmental samples|Rep: Nitrous oxide reductase -
unidentified bacterium
Length = 219
Score = 35.1 bits (77), Expect = 0.56
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T D+IH +P + + PG F +PG+++ C+ C A H
Sbjct: 169 TIRDMIHGFALPDHNLNIALAPGYTKTITFGAGKPGVYWYYCTNFCHALH 218
>UniRef50_A0RZ18 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 2; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 2 -
Cenarchaeum symbiosum
Length = 143
Score = 35.1 bits (77), Expect = 0.56
Identities = 20/49 (40%), Positives = 24/49 (48%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+TDVIHS I V +DA PG++ F G QC E CG H
Sbjct: 81 STDVIHSFNIHDYVVLMDAVPGKVTTVWFAPTEVGEHDIQCREYCGLIH 129
>UniRef50_Q7VDD7 Cluster: Cytochrome c oxidase subunit 2; n=23;
Cyanobacteria|Rep: Cytochrome c oxidase subunit 2 -
Prochlorococcus marinus
Length = 277
Score = 34.7 bits (76), Expect = 0.74
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DVIH+ +P +K D PG+ NF + G + C+E+CG H
Sbjct: 201 DVIHAFWVPEFRLKQDIIPGQPTILNFTPTKIGRYPIICAELCGPYH 247
>UniRef50_Q35646 Cluster: Cytochrome c oxidase subunit 2; n=1;
Petunia sp.|Rep: Cytochrome c oxidase subunit 2 -
Petunia sp. (Petunia)
Length = 379
Score = 34.7 bits (76), Expect = 0.74
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Frame = +1
Query: 10 NIEFDSYIIPSNEIKNNEFRLLDVDXXXXXXXXXXXXXXXTATDV----IHS*TIPSLGV 177
++ FDSY IP ++ + + RLL+VD T+ V + +PSLGV
Sbjct: 98 SLTFDSYTIPEDDPELGQSRLLEVDNRVVVPANSSLRFIVTSAAVPSLGVKGDAVPSLGV 157
Query: 178 KVDANP 195
K DA P
Sbjct: 158 KGDAVP 163
>UniRef50_A7D932 Cluster: Ubiquinol oxidase, subunit II; n=4;
Proteobacteria|Rep: Ubiquinol oxidase, subunit II -
Methylobacterium extorquens PA1
Length = 430
Score = 34.3 bits (75), Expect = 0.98
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
TA+ V+++ IP+L + A PG Q + IN+PG + G S G S
Sbjct: 235 TASSVMNAFYIPALAGMIYAMPGMQTQLHAVINKPGAYDGLSSHYSGTGFS 285
>UniRef50_A6FB25 Cluster: Cytochrome C oxidase; n=1; Moritella sp.
PE36|Rep: Cytochrome C oxidase - Moritella sp. PE36
Length = 456
Score = 33.9 bits (74), Expect = 1.3
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV+H+ T+P VK+D PG + F G + C E+CG H
Sbjct: 187 DVLHNFTVPQFRVKMDLVPGTQSYLWFTPTLLGRYEILCLELCGIAH 233
>UniRef50_A6CA06 Cluster: Cytochrome c oxidase subunit 2; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit 2 - Planctomyces maris DSM 8797
Length = 336
Score = 33.9 bits (74), Expect = 1.3
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 12/60 (20%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQ------------CSEICGANHS 282
DVIHS IP+ K+D PGR Q F P + G+ CSE CG HS
Sbjct: 152 DVIHSLWIPAFRTKMDVVPGRYTQEWFKAIAPPVPEGEESVEYPLEYPLMCSEYCGTKHS 211
>UniRef50_A5GCS3 Cluster: Cytochrome C oxidase subunit II,
transmembrane region; n=1; Geobacter uraniumreducens
Rf4|Rep: Cytochrome C oxidase subunit II, transmembrane
region - Geobacter uraniumreducens Rf4
Length = 311
Score = 33.5 bits (73), Expect = 1.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
T+ DVIH +P +K D PG + G + C++ CG HS + V+
Sbjct: 137 TSADVIHGFYLPEFRLKQDILPGSYTSLWLQPEKEGKYDIYCTQYCGTGHSTMRAVM 193
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 33.5 bits (73), Expect = 1.7
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +1
Query: 370 RGGARYPIRPIVSR 411
RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273
>UniRef50_Q1ITB3 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Cytochrome c oxidase, subunit II precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 120
Score = 33.1 bits (72), Expect = 2.3
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHSFIPIVI 300
DV H VK D +++ F G F G+C+ CGA H + + I
Sbjct: 63 DVSHGFVSEEFRVKTDIPKRGVSKVTFTPQNAGDFVGKCAHFCGAGHGEMQLTI 116
>UniRef50_Q62JQ5 Cluster: Cytochrome c oxidase family protein; n=18;
Burkholderiaceae|Rep: Cytochrome c oxidase family
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 141
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TA D + +IP GV+ D PG + + PG C CG+ H
Sbjct: 82 TAQDTVMGFSIPQYGVRADVPPGAVVRLAAQAGGPGTVQFLCDIFCGSGH 131
>UniRef50_Q0AI63 Cluster: Cytochrome c oxidase, subunit II; n=1;
Nitrosomonas eutropha C91|Rep: Cytochrome c oxidase,
subunit II - Nitrosomonas eutropha (strain C71)
Length = 333
Score = 32.7 bits (71), Expect = 3.0
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQ 252
T+ V+ S IP+LG ++ A G + Q N +RPG F G+
Sbjct: 187 TSATVMQSFFIPALGSQIYAMGGMVTQLNLQADRPGHFLGE 227
>UniRef50_Q5V4X2 Cluster: Nitrous-oxide reductase; n=1; Haloarcula
marismortui|Rep: Nitrous-oxide reductase - Haloarcula
marismortui (Halobacterium marismortui)
Length = 659
Score = 32.7 bits (71), Expect = 3.0
Identities = 18/76 (23%), Positives = 27/76 (35%)
Frame = +1
Query: 52 KNNEFRLLDVDXXXXXXXXXXXXXXXTATDVIHS*TIPSLGVKVDANPGRLNQTNFFINR 231
K +EF L D D+IH IP + P + F +
Sbjct: 570 KRSEFGLPDFTVQEGDEVKLSTTNIEGVQDIIHGVAIPEHDINYAVAPQDTREVTFTADD 629
Query: 232 PGIFFGQCSEICGANH 279
PG+++ C+ C A H
Sbjct: 630 PGVYWIYCTYFCSALH 645
>UniRef50_Q6NG98 Cluster: Cytochrome c oxidase subunit 2 precursor
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide II)
(Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2);
n=6; Corynebacterium|Rep: Cytochrome c oxidase subunit 2
precursor (EC 1.9.3.1) (Cytochrome c oxidase polypeptide
II) (Cytochrome aa3 subunit 2) (Oxidase aa(3) subunit 2)
- Corynebacterium diphtheriae
Length = 362
Score = 32.7 bits (71), Expect = 3.0
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDA--NPGRLNQTNFF----INRPGIFFGQCSEICGANHSFI 288
+ DV H+ +P K DA +P + Q F I + G F G+C+E+CG H+ +
Sbjct: 241 SADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMM 298
>UniRef50_Q1NHQ5 Cluster: Cytochrome c oxidase subunit 2; n=1;
Sphingomonas sp. SKA58|Rep: Cytochrome c oxidase subunit
2 - Sphingomonas sp. SKA58
Length = 258
Score = 32.3 bits (70), Expect = 4.0
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGA 273
T+ V+ S IP L ++ A G Q NF +RPG++ G ++ GA
Sbjct: 137 TSGTVMQSLLIPQLAGQIYAMAGMRTQLNFAADRPGVYRGLNTQFNGA 184
>UniRef50_A7H6W6 Cluster: Nitrous-oxide reductase precursor; n=7;
Bacteria|Rep: Nitrous-oxide reductase precursor -
Anaeromyxobacter sp. Fw109-5
Length = 647
Score = 32.3 bits (70), Expect = 4.0
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 136 TDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
TD +H + + + +PG F ++PG+F C+ C A H
Sbjct: 562 TDELHGFGLLDYNINLVVDPGETKVVTFKADKPGVFPYYCTNFCSALH 609
>UniRef50_A7D3J6 Cluster: Cytochrome c oxidase, subunit II; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Cytochrome c
oxidase, subunit II - Halorubrum lacusprofundi ATCC
49239
Length = 258
Score = 32.3 bits (70), Expect = 4.0
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGI--------FFGQCSEICGANHS 282
T++DV HS L +K DA PG ++ F ++ + F +C E+CGA HS
Sbjct: 155 TSSDVWHSFGSSELRIKSDAIPGDTSEVWFSVSSEEVEAQGGEATFRVECFELCGAGHS 213
>UniRef50_Q1IUK8 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Acidobacteria bacterium Ellin345|Rep:
Cytochrome c oxidase, subunit II precursor -
Acidobacteria bacterium (strain Ellin345)
Length = 267
Score = 31.9 bits (69), Expect = 5.2
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 139 DVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
DV HS + L V+ D PG +F +PG + C+++CG H
Sbjct: 195 DVGHSFYVRELRVQQDFVPGLDLMVHFTATKPGRYEIVCTQLCGLGH 241
>UniRef50_Q1QJV6 Cluster: Cytochrome c oxidase, subunit II; n=1;
Nitrobacter hamburgensis X14|Rep: Cytochrome c oxidase,
subunit II - Nitrobacter hamburgensis (strain X14 / DSM
10229)
Length = 180
Score = 31.5 bits (68), Expect = 6.9
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 178 KVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+ A PG +N + N PG++ C E CG H
Sbjct: 135 QTQAMPGYVNVLRYTFNEPGVYRVLCLEYCGVAH 168
>UniRef50_A6Q5Y5 Cluster: Nitrous-oxide reductase NosZ; n=2;
unclassified Epsilonproteobacteria|Rep: Nitrous-oxide
reductase NosZ - Nitratiruptor sp. (strain SB155-2)
Length = 867
Score = 31.5 bits (68), Expect = 6.9
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
A D H T+ V PG+ F ++ G+F C+E C A H
Sbjct: 586 AEDETHGFTVDWYNVHASLEPGKTVAVTFKADQEGVFPYYCTEFCSALH 634
>UniRef50_A7D124 Cluster: Cytochrome c oxidase, subunit II
precursor; n=1; Halorubrum lacusprofundi ATCC 49239|Rep:
Cytochrome c oxidase, subunit II precursor - Halorubrum
lacusprofundi ATCC 49239
Length = 171
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
T+ DVIH + PG +++ + P + C+E CGA H
Sbjct: 97 TSADVIHGFEVVGTNANAMVVPGEVSELTVKVEEPQEYGLICNEYCGAGH 146
>UniRef50_A3MXH7 Cluster: Nitrous-oxide reductase precursor; n=1;
Pyrobaculum calidifontis JCM 11548|Rep: Nitrous-oxide
reductase precursor - Pyrobaculum calidifontis (strain
JCM 11548 / VA1)
Length = 673
Score = 31.5 bits (68), Expect = 6.9
Identities = 14/49 (28%), Positives = 18/49 (36%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
+ D H I V PG + F + PG+F C E C H
Sbjct: 614 SVDATHGLAIAEYNVAASLEPGEYAEIEFVADIPGVFAFYCYEFCSPLH 662
>UniRef50_Q6ZXZ8 Cluster: Nitrous oxide reductase precursor; n=13;
Proteobacteria|Rep: Nitrous oxide reductase precursor -
Wolinella succinogenes
Length = 864
Score = 31.1 bits (67), Expect = 9.1
Identities = 14/49 (28%), Positives = 19/49 (38%)
Frame = +1
Query: 133 ATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANH 279
A D H + V PG+ F + G+F C+E C A H
Sbjct: 583 AQDETHGFAVSGYNVHASVEPGKTVAVTFTADEEGVFPYYCTEFCSALH 631
>UniRef50_A1HRK5 Cluster: Putative uncharacterized protein
precursor; n=1; Thermosinus carboxydivorans Nor1|Rep:
Putative uncharacterized protein precursor -
Thermosinus carboxydivorans Nor1
Length = 282
Score = 31.1 bits (67), Expect = 9.1
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = -2
Query: 74 NSRNSLFFISLDGIIYESNSILLK 3
N+RNSLFF++L +++ S +L+K
Sbjct: 3 NTRNSLFFLALAAVLWSSGGVLVK 26
>UniRef50_Q89AA3 Cluster: Ubiquinol oxidase subunit 2 precursor (EC
1.10.3.-) (Ubiquinol oxidase polypeptide II) (Cytochrome
o subunit 2) (Oxidase BO(3) subunit 2); n=2; Buchnera
aphidicola (Baizongia pistaciae)|Rep: Ubiquinol oxidase
subunit 2 precursor (EC 1.10.3.-) (Ubiquinol oxidase
polypeptide II) (Cytochrome o subunit 2) (Oxidase BO(3)
subunit 2) - Buchnera aphidicola subsp. Baizongia
pistaciae
Length = 286
Score = 31.1 bits (67), Expect = 9.1
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 130 TATDVIHS*TIPSLGVKVDANPGRLNQTNFFINRPGIFFGQCSEICGANHS 282
T+ V++S IPSLG ++ PG N N+ G F G S G S
Sbjct: 166 TSGSVMNSFFIPSLGSQIYVMPGMKTNLNLIANKLGQFKGFSSNYSGKGFS 216
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 331,789,478
Number of Sequences: 1657284
Number of extensions: 5265617
Number of successful extensions: 8541
Number of sequences better than 10.0: 248
Number of HSP's better than 10.0 without gapping: 8352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8515
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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