Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31612
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617     27   6.8  
05_04_0351 + 20521164-20522132,20522604-20522706,20522890-20523440     27   8.9  

>10_08_0575 + 18885403-18885483,18885591-18885949,18886320-18886617
          Length = 245

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 422 RQRDSHWVTNSNWMI 378
           R RD HW+T   WMI
Sbjct: 135 RTRDVHWMTQGTWMI 149


>05_04_0351 + 20521164-20522132,20522604-20522706,20522890-20523440
          Length = 540

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 491 IDTFRLKTLXQYDICKSNFLLKL 423
           I+ F  K+   +DICK++FL+KL
Sbjct: 229 INCFAFKSEFLHDICKADFLVKL 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,644,867
Number of Sequences: 37544
Number of extensions: 172972
Number of successful extensions: 244
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)