Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31611
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   4.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   8.6  

>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +1

Query: 196 RMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDR 303
           R+KA    N+   +  NGR  I +V S+  D  F R
Sbjct: 410 RLKASNEINEALLKRLNGRGVIHLVPSKIRDVYFLR 445


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 12/47 (25%), Positives = 21/47 (44%)
 Frame = +1

Query: 229 KDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDD 369
           +DQD N  +D+  + S+A   I +        G+ +     +  GDD
Sbjct: 515 EDQDRNLASDLAKILSQAKQEIPEWLGSKSYGGSADQFGGRDIRGDD 561


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.134    0.377 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,536
Number of Sequences: 336
Number of extensions: 1911
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)