Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31611
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 59 2e-09
SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7) 32 0.32
SB_24984| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032) 31 0.74
SB_15605| Best HMM Match : p450 (HMM E-Value=1.4013e-45) 30 0.98
SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19) 30 0.98
SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35) 30 0.98
SB_18180| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_2862| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2) 29 2.3
SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0) 29 2.3
SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35) 29 3.0
SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16) 28 5.3
SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7) 27 6.9
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43) 27 9.2
SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_3236| Best HMM Match : Oxidored_q2 (HMM E-Value=0.083) 27 9.2
SB_7859| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_54820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 99.1 bits (236), Expect = 2e-21
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 106 FESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAH 285
++SLN GD FILD I+ + G + VERMK I VA +I+D++ GRA + ++D
Sbjct: 52 YKSLNKGDVFILDDGLNIYCWNGSQCSRVERMKGIDVAKRIRDEERGGRAQVHIIDECKD 111
Query: 286 DGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEISDKTGSIRITRLPA-P 462
G+ +FFDALGS + AE+ G + + SLS +SD +G + + + A P
Sbjct: 112 KGLESKFFDALGSRGE----IAEDLGTTRSLR-KPARAPSLSTMSDASGELEMREIEAKP 166
Query: 463 LKKEQLNTDECYVLDTGS 516
LKK L+T++C++LD GS
Sbjct: 167 LKKSNLDTNDCFILDCGS 184
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 59.3 bits (137), Expect = 2e-09
Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 10/160 (6%)
Frame = +1
Query: 67 GKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQI---KDQ 237
G+RN++ + ++P +S N+GDC++L ++F +VG+ A +ER K +A++I ++
Sbjct: 1457 GRRNIQTRLIEPCQKSFNSGDCYVLVTKDELFAWVGKHANAIERAKVTEIASRIFTKREL 1516
Query: 238 DHNGRADIEVVDSEAHDGI----FDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVS 405
D R DI V+ ++ D +F+ L + I +A D+++E VT+
Sbjct: 1517 DCKAR-DIVFVEEKSQDEDNLRGAKKFWKLLNGDPEAEIKEASSLPTDEDYEKGVTRTNM 1575
Query: 406 LSEI--SDKTGSIRITRLPAPLKK-EQLNTDECYVLDTGS 516
+ ++ +D + + L + L+T E V D GS
Sbjct: 1576 IYKVHWTDPPSLVPVETHCGRLPQISLLDTKEVLVFDFGS 1615
>SB_3911| Best HMM Match : Pepsin-I3 (HMM E-Value=3.7)
Length = 393
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +2
Query: 203 KPSP*PTRLKTRITMEGPISKWLTPKRTMESSTGSSMPSAPATRRPSLMP 352
K P P ++ T + + W TP R+ ++T +S P AT L P
Sbjct: 296 KRQPPPVKIFTETPSKSVTAAWTTPNRSSTNTTSASSPHRSATEIGKLRP 345
>SB_24984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 31.5 bits (68), Expect = 0.43
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +1
Query: 220 NQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDD 369
N +D D +G D + D + HDG D D G+ D E+G DD
Sbjct: 78 NDDEDDDGHGGDDYDGHDDDGHDGGDDDTEDGDDDGHDNVDDDDEDGDDD 127
>SB_7860| Best HMM Match : Gelsolin (HMM E-Value=0.0032)
Length = 675
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +1
Query: 328 NKEAIADAEEGGDDQEFECVVTKEVSLSEISDKTGSIRITRLP--APLKKEQLNTDECYV 501
N + A EG ++ + E LS++SD +G + + + + +K+ QLNT++ ++
Sbjct: 544 NDKLAAVIPEGKPKKDKKPEPKLEKVLSKLSDASGHLVFSEVSRGSAVKRSQLNTNDVFI 603
Query: 502 LDTG 513
+D+G
Sbjct: 604 MDSG 607
>SB_15605| Best HMM Match : p450 (HMM E-Value=1.4013e-45)
Length = 454
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -1
Query: 492 FIGVQLLLLKRRGESGYPDAASLIG-DLTQGHLLRDDAFKLLIVAPFFGI 346
FIG +L LKR+G S D + L G L G L+ DD ++ F G+
Sbjct: 211 FIGKKLHELKRQGNSKARDHSDLFGLLLASGELIEDDLVASVVEFLFTGV 260
>SB_10819| Best HMM Match : DCX (HMM E-Value=6.3e-19)
Length = 1199
Score = 30.3 bits (65), Expect = 0.98
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 25 RSMREQRNDSSXIKGKRNVRVKQVKPTFESLNNGDCFILDVD 150
RS ++QR D K VRVK K T+ S N D +D D
Sbjct: 350 RSRKKQRRDQQGDKQSITVRVKGKKLTYYSPTNNDRLTVDED 391
>SB_7858| Best HMM Match : Gelsolin (HMM E-Value=0.35)
Length = 103
Score = 30.3 bits (65), Expect = 0.98
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 121 NGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDSE 279
N D FI+D+ I+ +VG A E+ KA IKD+ G +++++
Sbjct: 3 NSDVFIVDLGLVIYQWVGCDASPFEKNKAAQYIQVIKDERSGGDIKTHLLENQ 55
>SB_18180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 29.9 bits (64), Expect = 1.3
Identities = 22/90 (24%), Positives = 38/90 (42%)
Frame = +1
Query: 97 KPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVVDS 276
K E+ ++G C+I+ IF + A+ +IT+ + Q + D + D
Sbjct: 67 KINVENESDGWCYIIQRAKMIFSCRSQTAQSFFFF-SITIKRKKVKQQRIKKYDDDADDD 125
Query: 277 EAHDGIFDRFFDALGSGNKEAIADAEEGGD 366
D D +FD G G+ + D + GD
Sbjct: 126 ADADADADGYFDGDGDGDGDGDGDGDGDGD 155
>SB_2862| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 29.5 bits (63), Expect = 1.7
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 7/79 (8%)
Frame = +1
Query: 220 NQIKDQDHNGRADIEVVDSEAHD-------GIFDRFFDALGSGNKEAIADAEEGGDDQEF 378
N +D D G ++ + D+E D +D F D +GS N E AD + GD
Sbjct: 28 NDYEDDDGYGNSENDYGDNEDDDDDNIDDDSNYDGFSDDIGSLNNEDEADVDNNGDIDN- 86
Query: 379 ECVVTKEVSLSEISDKTGS 435
V K+ ++IS+K S
Sbjct: 87 ---VDKDFFDNDISNKNDS 102
>SB_3697| Best HMM Match : Mucin (HMM E-Value=4.2)
Length = 120
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 221 TRLKTRITMEGPISKWLTPKRTMESSTGSS--MPSAPATRRPSLMPKKGATIKSL 379
T TR+ ++K +T RT S+ GSS P PAT S +P + + ++
Sbjct: 54 TSKPTRVPSNPTMAKVITKPRTTSSTPGSSSTTPQKPATTEHSTIPLSHSPVATM 108
>SB_45868| Best HMM Match : 7tm_3 (HMM E-Value=0)
Length = 604
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +1
Query: 271 DSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEISD 423
D++ DG D D GSG+ + + GGD+ + C KE + +D
Sbjct: 17 DNDGDDGGDDYDVDNNGSGDGKFVVAMNVGGDNARYMCPRAKEQKTEQDTD 67
>SB_10018| Best HMM Match : Sas10_Utp3 (HMM E-Value=7.6e-35)
Length = 430
Score = 28.7 bits (61), Expect = 3.0
Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +1
Query: 157 IFVFVGE-KAKGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFD---RFFDALGS 324
+F F E + K +E ++ A K + +DI D E+ D D +F
Sbjct: 8 LFTFPRELQVKPIEMGRSKRSAKPKKKAESEEESDISEPDPESEDYFKDDVGKFHSKSDK 67
Query: 325 GNKEAIADAEEGGDDQE 375
N E D ++GGDD E
Sbjct: 68 DNVEDDDDDDDGGDDDE 84
>SB_23418| Best HMM Match : NAD_binding_1 (HMM E-Value=1.2e-16)
Length = 594
Score = 27.9 bits (59), Expect = 5.3
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 277 EAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEISDKT 429
+AH D FD L + I+ E G+ Q +EC VT S+ E+S T
Sbjct: 96 KAHKSRGDDQFDLLHTCQPPKISRLENFGESQFWECTVT---SVEEVSHNT 143
>SB_58802| Best HMM Match : Gag_spuma (HMM E-Value=2.7)
Length = 810
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +2
Query: 254 PISKWLTPKRTMESSTGSSMPSAPATRRPSLMPK 355
P S W TP R M+ S SAP R P PK
Sbjct: 471 PKSVWFTPTRPMDISQ-QHCASAPGIRTPFRTPK 503
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.5 bits (58), Expect = 6.9
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +1
Query: 82 RVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVE--RMKAITVANQIKDQDHNGRA 255
R+K++ + LN+ + D ++ VGEK+ + R A V + D +
Sbjct: 2606 RIKELDAALQDLNSEVKKVEDAADEVVTAVGEKSPAADDARKDADGVRQKYSDLKDSLAE 2665
Query: 256 DIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQE 375
+ VD E + D+F DAL S +E + +E +Q+
Sbjct: 2666 LKDKVDEEV--AMSDKFHDAL-SALEEWLPKVQEAVSNQQ 2702
>SB_40784| Best HMM Match : TGF_beta (HMM E-Value=6.40393e-43)
Length = 1402
Score = 27.1 bits (57), Expect = 9.2
Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 9/132 (6%)
Frame = +1
Query: 31 MREQRND-SSXIKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKA 207
+RE+R+ ++ + GK R K++ L + L++ ++ KAKG KA
Sbjct: 339 LREERDTLNTVLAGKDGEREKEISKLLSRLKGSEQD-LNLTKRLL-----KAKGEMSGKA 392
Query: 208 ITVANQIKDQDHNGRADIEVVDSEAH-------DGIFD-RFFDALGSGNKEAIADAEEGG 363
+ VA +++Q R +++ ++++ H I D R+F+A + +A E
Sbjct: 393 VLVAESMQEQITAKRGELDSLNNKIHWMQESLNAAIKDKRYFEAKTNKLSAELAQMTEDR 452
Query: 364 DDQEFECVVTKE 399
D F+ +E
Sbjct: 453 DQLSFQAQQVRE 464
>SB_32383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1850
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +1
Query: 316 LGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEISDKTGSIRITRLPAPLKKEQLNTDEC 495
L K+A A +DQ+ E K S D TGS++ ++PA ++ +
Sbjct: 187 LNENAKDASAQQGARQEDQKAESTQPKLEGWSTQGDSTGSLKGVKVPASAYEQARQGKDV 246
Query: 496 YV 501
Y+
Sbjct: 247 YI 248
>SB_3236| Best HMM Match : Oxidored_q2 (HMM E-Value=0.083)
Length = 283
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 199 MKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQE 375
M + V D D +G D+ D + D D D +GSG+ + +D ++GGDD +
Sbjct: 55 MMVMIVMTCYDDDDDDG--DVGDGDGDGDDDDGDDDDDEIGSGDGDDDSD-DDGGDDDD 110
>SB_7859| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 257
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +1
Query: 238 DHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDD 369
D+ G D+ VV+ + H G D D G G+ + D + GGDD
Sbjct: 143 DNGGVVDV-VVEDDGHGG-GDGGDDGDGGGDDDDGGDGDGGGDD 184
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.134 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,274,217
Number of Sequences: 59808
Number of extensions: 271359
Number of successful extensions: 838
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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