Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31611
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical pr... 77 1e-14
U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I ho... 40 0.001
L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophi... 40 0.001
U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical pr... 33 0.12
U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical pr... 31 0.65
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 29 1.5
U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical pr... 29 1.5
U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical pr... 28 3.4
U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical pr... 27 6.0
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transien... 27 6.0
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 6.0
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 8.0
L14429-2|AAP68927.1| 229|Caenorhabditis elegans Hypothetical pr... 27 8.0
L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z70755-3|CAA94782.1| 475|Caenorhabditis elegans Hypothetical
protein K06A4.3 protein.
Length = 475
Score = 76.6 bits (180), Expect = 1e-14
Identities = 44/152 (28%), Positives = 87/152 (57%), Gaps = 4/152 (2%)
Frame = +1
Query: 64 KGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDH 243
KGKRNVR +V+ SLN GD FILD+ ++V++ ++ +ER+K + A I D +
Sbjct: 141 KGKRNVRCTEVECEVNSLNLGDVFILDLGKDLYVWMPPESGRLERIKGMARAKNIADHER 200
Query: 244 NGRADIEVVDSEA--HDGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEI 417
G + ++D +D F +F + S K ++ ++ DD + +T++++L ++
Sbjct: 201 MGIPKVHILDDVEWDNDSTFWSYFGGVSSVRK--VSKGKD--DDDNYWKRLTEQITLWKV 256
Query: 418 SDKTGSIRITRLP--APLKKEQLNTDECYVLD 507
SD +G+ +++ + ++KEQL+ + ++LD
Sbjct: 257 SDASGAAKVSMVSQGENIRKEQLDPKDAFILD 288
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +1
Query: 109 ESLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDH 243
E L+ D FILD ++ IFV++G + ER KA+ Q H
Sbjct: 277 EQLDPKDAFILDAINGGIFVWIGHECTLEERSKALIWGQNYLKQHH 322
>U01183-1|AAC03567.1| 1257|Caenorhabditis elegans flightless-I homolog
protein.
Length = 1257
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Frame = +1
Query: 79 VRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRAD 258
V ++ V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+++
Sbjct: 641 VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSE 700
Query: 259 IEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEF-ECVVTKEVSLSEISDKTGS 435
IE F+ AL +GN D +G + E V + L +++ G
Sbjct: 701 IETCRQARCP---PEFWQAL-TGN----PDKPQGAIVEHVPEGFVAERKKLYKVNIGMGF 752
Query: 436 IRITRLPAP---LKKEQLNTDECYVLDTGS 516
+ + ++ P K++ L + +VLD+ S
Sbjct: 753 LELPQVELPKGIAKQDMLGSKGVFVLDSNS 782
>L07143-3|AAB37088.2| 1257|Caenorhabditis elegans Fli-i (drosophila
flightless) homologprotein 1 protein.
Length = 1257
Score = 39.5 bits (88), Expect = 0.001
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 4/150 (2%)
Frame = +1
Query: 79 VRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRAD 258
V ++ V + ESL+ CF+LD I+++ G K++ KA A ++ +D G+++
Sbjct: 641 VEMEPVPLSVESLDPRFCFLLDAGETIWIWSGYKSRITVSNKARLFAERLNKRDRKGKSE 700
Query: 259 IEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEF-ECVVTKEVSLSEISDKTGS 435
IE F+ AL +GN D +G + E V + L +++ G
Sbjct: 701 IETCRQARCP---PEFWQAL-TGN----PDKPQGAIVEHVPEGFVAERKKLYKVNIGMGF 752
Query: 436 IRITRLPAP---LKKEQLNTDECYVLDTGS 516
+ + ++ P K++ L + +VLD+ S
Sbjct: 753 LELPQVELPKGIAKQDMLGSKGVFVLDSNS 782
>U88311-8|AAB42341.2| 918|Caenorhabditis elegans Hypothetical
protein C10H11.1 protein.
Length = 918
Score = 33.1 bits (72), Expect = 0.12
Identities = 35/155 (22%), Positives = 62/155 (40%), Gaps = 3/155 (1%)
Frame = +1
Query: 61 IKGKRNVRVKQVKPTFESLNNGDCFILDVDHQIFVFVGEKAKGVERMKAITVANQIKDQ- 237
++G +NV V+ V P S++ CF++ + + G + +E+ KA + +I +
Sbjct: 224 VRGSKNVDVRLVAPAMSSVHEVACFVVVHQKHLMKYEGLYSNILEKTKASQLCIEILGKS 283
Query: 238 DHNGRAD-IEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTK-EVSLS 411
D N A+ I V + + F + S + + + + FE V K + L
Sbjct: 284 DLNCTAESIVTVTGASRSTLSKLLFCSENSESSSENNNYHQASSVEPFETTVAKLNLVLR 343
Query: 412 EISDKTGSIRITRLPAPLKKEQLNTDECYVLDTGS 516
D T R L E + E + D GS
Sbjct: 344 IAGDNTAETCSRR--ERLSYEIMKPSEVLIFDFGS 376
>U64608-4|AAB04595.2| 282|Caenorhabditis elegans Hypothetical
protein T22B7.3 protein.
Length = 282
Score = 30.7 bits (66), Expect = 0.65
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 184 KGVERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFF---DALGSGNKEAIA 345
+GV R KA+ +Q+K+ N A +EV++S + + D F A+ GNK +A
Sbjct: 39 RGVNREKALKQWDQLKNTIENSGAKVEVMESTGAESLPDIVFAANAAIIKGNKAYLA 95
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 242 TMEGPISKWLTPKRTMESSTGSSMPSAPATRRPSLMPKKGAT 367
T P+ + L+P SSTG+S P+ P RP PKK T
Sbjct: 663 TASEPVQE-LSPTPEASSSTGTSAPARPPPARPE-APKKDET 702
>U12965-7|AAY86205.1| 528|Caenorhabditis elegans Hypothetical
protein F23F12.13 protein.
Length = 528
Score = 29.5 bits (63), Expect = 1.5
Identities = 27/68 (39%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = -1
Query: 426 LIGDLTQGHLLRDDAFKLLIVAPFFGISDGLLVAGAEGIEEPVEDSIVRFGVNHFDIGPS 247
LIG +T GHL D F V+ FFGIS G+L A G E F F +G S
Sbjct: 108 LIGAITYGHL--GDHFGRKPVS-FFGISVGILFGVASGFAPSWE----VFAAFRFIVGTS 160
Query: 246 I--VILVF 229
I +++VF
Sbjct: 161 IASILIVF 168
>U40419-8|AAA81428.3| 673|Caenorhabditis elegans Hypothetical
protein C27F2.1 protein.
Length = 673
Score = 28.3 bits (60), Expect = 3.4
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Frame = +1
Query: 97 KPTFE-SLNNGDCFILD-VDHQIFVFVGEKAKGVERMKAITVANQIKDQDHNGRADIEVV 270
KPT ++N + +D++ + + E+ + + +A N+++ G IEV
Sbjct: 121 KPTIAPKISNAQITVQSTIDNKPYSYHNEEERQTQEQRAFGRLNKLR-----GLISIEVT 175
Query: 271 DSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQEFECVVTKEVSLSEISDKTGSIRITR 450
S+ + F+ S + G D E V T+ E + TR
Sbjct: 176 KSQVFTDLSSNIFEPFNSLPSNKSHALTQTGKDCHTEEVQTERGETEEKETQCPHSESTR 235
Query: 451 LPAPLKKEQLNTD 489
+ ++KE+ +TD
Sbjct: 236 IEDGIEKERTSTD 248
>U39653-2|AAM69064.1| 1092|Caenorhabditis elegans Hypothetical
protein T13H2.5b protein.
Length = 1092
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 293 SSTGSSMPSAPATRRPS 343
+ST SS SAPATRRPS
Sbjct: 7 ASTVSSKSSAPATRRPS 23
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 293 SSTGSSMPSAPATRRPS 343
+ST SS SAPATRRPS
Sbjct: 1386 ASTVSSKSSAPATRRPS 1402
>AF040654-4|AAN65303.2| 886|Caenorhabditis elegans Trp (transient
receptor potential)channel family protein 2, isoform b
protein.
Length = 886
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 182 AFSPTKTKI*WSTSKMKQSPLFKDSNVGFTCLTRT 78
+F P+ +K+ WS K+K S L K ++ T L T
Sbjct: 820 SFMPSSSKLSWSNLKVKASRLSKSKSIDTTHLDVT 854
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 6.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 203 KPSP*PTRLKTRITMEGPISKWLTPKRTMESSTGSSMPSAPATRRPSLMPKK 358
KP P P T I+ S P + S+T S + S P+T S+ P+K
Sbjct: 197 KPLP-PLSSITSISSSAAGSSISAPSTSQPSTTSSLITSPPSTSSSSMAPRK 247
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.1 bits (57), Expect = 8.0
Identities = 20/54 (37%), Positives = 23/54 (42%)
Frame = +2
Query: 176 RRRKESRG*KPSP*PTRLKTRITMEGPISKWLTPKRTMESSTGSSMPSAPATRR 337
RRR S P P P R K+R + P P R S + S P AP RR
Sbjct: 347 RRRSPSASKSPPPAPKRAKSR--SKSP------PARRRRSPSASKSPPAPRRRR 392
>L14429-2|AAP68927.1| 229|Caenorhabditis elegans Hypothetical
protein ZK652.6b protein.
Length = 229
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 193 ERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQ 372
ER T +++ D R ++VD G+ +A+ + E I E GDD+
Sbjct: 148 ERDPITTGEMEVEIPDFTARGYGQIVDGNIPLGVVPEADEAITNSEDEEIVGGETSGDDE 207
Query: 373 E 375
+
Sbjct: 208 D 208
>L14429-1|AAA28219.2| 575|Caenorhabditis elegans Hypothetical
protein ZK652.6a protein.
Length = 575
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/61 (24%), Positives = 26/61 (42%)
Frame = +1
Query: 193 ERMKAITVANQIKDQDHNGRADIEVVDSEAHDGIFDRFFDALGSGNKEAIADAEEGGDDQ 372
ER T +++ D R ++VD G+ +A+ + E I E GDD+
Sbjct: 494 ERDPITTGEMEVEIPDFTARGYGQIVDGNIPLGVVPEADEAITNSEDEEIVGGETSGDDE 553
Query: 373 E 375
+
Sbjct: 554 D 554
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.377
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,319,353
Number of Sequences: 27780
Number of extensions: 193343
Number of successful extensions: 723
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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