Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31609
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Re... 95 6e-19
UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I... 50 2e-05
UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep: ... 50 4e-05
UniRef50_Q8WPC1 Cluster: Adult cardiac troponin I; n=9; Ascidiac... 46 5e-04
UniRef50_Q7M3Y3 Cluster: Troponin I; n=5; Pectinidae|Rep: Tropon... 46 5e-04
UniRef50_Q5DDC3 Cluster: SJCHGC00516 protein; n=4; Schistosoma j... 43 0.005
UniRef50_Q4RGJ1 Cluster: Chromosome undetermined SCAF15099, whol... 42 0.011
UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294; Eute... 40 0.034
UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9; R... 40 0.045
UniRef50_Q9NDR9 Cluster: Troponin I; n=1; Branchiostoma belcheri... 39 0.059
UniRef50_P45378 Cluster: Troponin T, fast skeletal muscle; n=64;... 39 0.078
UniRef50_P48788 Cluster: Troponin I, fast skeletal muscle; n=15;... 38 0.14
UniRef50_Q71N42 Cluster: Fast muscle troponin I; n=31; Euteleost... 38 0.18
UniRef50_Q4RGJ7 Cluster: Chromosome undetermined SCAF15099, whol... 37 0.24
UniRef50_A2DGN0 Cluster: Viral A-type inclusion protein, putativ... 37 0.24
UniRef50_P50754 Cluster: Troponin I, cardiac muscle; n=18; Tetra... 37 0.24
UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46; Panc... 36 0.41
UniRef50_Q23D13 Cluster: Viral A-type inclusion protein repeat c... 35 0.96
UniRef50_P19429 Cluster: Troponin I, cardiac muscle; n=108; Chor... 34 1.7
UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,... 33 2.9
UniRef50_Q23C48 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q4XS40 Cluster: Putative uncharacterized protein; n=3; ... 33 3.9
UniRef50_Q9H6N6 Cluster: CDNA: FLJ22037 fis, clone HEP08868; n=2... 33 5.1
UniRef50_Q27371 Cluster: Troponin T; n=6; Chromadorea|Rep: Tropo... 33 5.1
UniRef50_UPI00015556CE Cluster: PREDICTED: similar to hCG2008633... 32 6.8
UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q237L2 Cluster: Kinesin motor domain containing protein... 32 6.8
UniRef50_Q08EW3 Cluster: Oncosphere protein Tso22a; n=9; Platyhe... 32 6.8
UniRef50_Q23JA5 Cluster: DnaJ domain containing protein; n=2; ce... 32 8.9
UniRef50_Q5UZN6 Cluster: Putative uncharacterized protein; n=5; ... 32 8.9
>UniRef50_P36188 Cluster: Troponin I; n=50; cellular organisms|Rep:
Troponin I - Drosophila melanogaster (Fruit fly)
Length = 269
Score = 95.5 bits (227), Expect = 6e-19
Identities = 48/119 (40%), Positives = 65/119 (54%)
Frame = +3
Query: 159 IDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 338
I+RKRAEVRKRMEEAS GFMTP
Sbjct: 75 IERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLLLRKKAAEELKKEQERKAAERRRI 134
Query: 339 XXXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
CG P+N+ DA+E ++ +C++Y+ER+ E +K+DLEY V++KD EI+DLN+QVN
Sbjct: 135 IEERCGSPRNLSDASEGELQEICEEYYERMYICEGQKWDLEYEVRKKDWEINDLNAQVN 193
>UniRef50_UPI0000E48440 Cluster: PREDICTED: similar to troponin I,
partial; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to troponin I, partial -
Strongylocentrotus purpuratus
Length = 312
Score = 50.4 bits (115), Expect = 2e-05
Identities = 19/53 (35%), Positives = 35/53 (66%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
KP +ID + D ++ +C++ E++ E KFDLE I++++D+EI D+ + N
Sbjct: 230 KPLSIDSLSRDRLRALCEELTEQLTDAEGNKFDLEVIIRKQDLEIEDMKVRAN 282
>UniRef50_Q9XUN9 Cluster: Troponin I 3; n=6; Caenorhabditis|Rep:
Troponin I 3 - Caenorhabditis elegans
Length = 260
Score = 49.6 bits (113), Expect = 4e-05
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 1/117 (0%)
Frame = +3
Query: 168 KRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 347
K+AEVRKRMEEA+ GF+TP
Sbjct: 31 KKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQERQKTLQQ 90
Query: 348 XCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L QVN
Sbjct: 91 RTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLTIQVN 147
>UniRef50_Q8WPC1 Cluster: Adult cardiac troponin I; n=9;
Ascidiacea|Rep: Adult cardiac troponin I - Halocynthia
roretzi (Sea squirt)
Length = 260
Score = 46.0 bits (104), Expect = 5e-04
Identities = 15/49 (30%), Positives = 33/49 (67%)
Frame = +3
Query: 366 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
N+ +E +K +C++ H +I +++++++D+E V + D EI DLN ++
Sbjct: 132 NLGGMSEQDLKDLCRELHAKIEKVDEQRYDIEVKVNKNDQEIEDLNQRI 180
>UniRef50_Q7M3Y3 Cluster: Troponin I; n=5; Pectinidae|Rep: Troponin
I - Chlamys nipponensis akazara (Akazara scallop)
(Japanese scallop)
Length = 292
Score = 46.0 bits (104), Expect = 5e-04
Identities = 19/53 (35%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Frame = +3
Query: 360 PK-NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
PK + D + ++ +CKD+H+R+A LE++ +D E ++++D EI++L +VN
Sbjct: 184 PKFSTDGKDVAALQALCKDFHKRLASLEEDVYDWEAKIRKQDFEINELTLKVN 236
>UniRef50_Q5DDC3 Cluster: SJCHGC00516 protein; n=4; Schistosoma
japonicum|Rep: SJCHGC00516 protein - Schistosoma
japonicum (Blood fluke)
Length = 221
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
+P +D E+ + K +ER+ +LE +K+D E ++R+D EI++L +VN
Sbjct: 108 EPLKLDGLGENDLNAKVKQLYERVRQLEGDKYDWEEKLRRQDFEINELTIKVN 160
>UniRef50_Q4RGJ1 Cluster: Chromosome undetermined SCAF15099, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15099, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 199
Score = 41.5 bits (93), Expect = 0.011
Identities = 15/42 (35%), Positives = 32/42 (76%)
Frame = +3
Query: 387 DTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
D+++ +C+ H++I +++E++D+E VK+ + EI+DL S+V
Sbjct: 38 DSMQELCRKLHKQIDLVDEERYDMELKVKKSNKEINDLKSKV 79
>UniRef50_P45379 Cluster: Troponin T, cardiac muscle; n=294;
Euteleostomi|Rep: Troponin T, cardiac muscle - Homo
sapiens (Human)
Length = 298
Score = 39.9 bits (89), Expect = 0.034
Identities = 19/49 (38%), Positives = 30/49 (61%)
Frame = +3
Query: 369 IDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
ID NED ++ K+ + I LE EKFDL+ K++ EI+ L +++N
Sbjct: 231 IDHLNEDQLREKAKELWQSIYNLEAEKFDLQEKFKQQKYEINVLRNRIN 279
>UniRef50_Q6AHQ1 Cluster: Troponin t protein 3, isoform b; n=9;
Rhabditida|Rep: Troponin t protein 3, isoform b -
Caenorhabditis elegans
Length = 1178
Score = 39.5 bits (88), Expect = 0.045
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 366 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 509
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>UniRef50_Q9NDR9 Cluster: Troponin I; n=1; Branchiostoma
belcheri|Rep: Troponin I - Branchiostoma belcheri
(Amphioxus)
Length = 180
Score = 39.1 bits (87), Expect = 0.059
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = +3
Query: 360 PKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
P + D ++ +C+ H +I + E+EK+D+E V+ D E++DL ++
Sbjct: 50 PISTSGLGHDELEELCRRLHAQITKAEEEKYDVEQKVEINDKELADLTQRM 100
>UniRef50_P45378 Cluster: Troponin T, fast skeletal muscle; n=64;
Euteleostomi|Rep: Troponin T, fast skeletal muscle -
Homo sapiens (Human)
Length = 269
Score = 38.7 bits (86), Expect = 0.078
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
KP NID ED ++ K+ E + +LE +KF+ +KR+ +I+ L S+++
Sbjct: 195 KPLNIDHLGEDKLRDKAKELWETLHQLEIDKFEFGEKLKRQKYDITTLRSRID 247
>UniRef50_P48788 Cluster: Troponin I, fast skeletal muscle; n=15;
Eutheria|Rep: Troponin I, fast skeletal muscle - Homo
sapiens (Human)
Length = 182
Score = 37.9 bits (84), Expect = 0.14
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 393 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
++ +CK H +I E+EK+D+E V++ E+ D+N ++
Sbjct: 61 VQELCKQLHAKIDAAEEEKYDMEVRVQKTSKELEDMNQKL 100
>UniRef50_Q71N42 Cluster: Fast muscle troponin I; n=31;
Euteleostomi|Rep: Fast muscle troponin I - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 176
Score = 37.5 bits (83), Expect = 0.18
Identities = 14/40 (35%), Positives = 28/40 (70%)
Frame = +3
Query: 393 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
++ +CK H++I ++++E++D+E V + D EI DL +V
Sbjct: 57 LQDLCKKLHQQIDKVDEERYDMEAKVAKADKEIEDLKVKV 96
>UniRef50_Q4RGJ7 Cluster: Chromosome undetermined SCAF15099, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF15099, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 334
Score = 37.1 bits (82), Expect = 0.24
Identities = 16/53 (30%), Positives = 32/53 (60%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
KP N+D+ ++D ++ K+ E + LE+ KFD +KR+ E+ L ++++
Sbjct: 262 KPLNVDNLSDDKLRETAKELWELLYNLEEIKFDHCEKLKRQRYEVISLRNRID 314
>UniRef50_A2DGN0 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type inclusion
protein, putative - Trichomonas vaginalis G3
Length = 4263
Score = 37.1 bits (82), Expect = 0.24
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +3
Query: 408 KDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
K+ E A+LE+EK + ++ KD EI DL SQ+N
Sbjct: 2484 KNLEEEKAKLEEEKAQAQKTIEEKDQEIEDLTSQIN 2519
>UniRef50_P50754 Cluster: Troponin I, cardiac muscle; n=18;
Tetrapoda|Rep: Troponin I, cardiac muscle - Xenopus
laevis (African clawed frog)
Length = 244
Score = 37.1 bits (82), Expect = 0.24
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
+P + + ++ +C++ H RI +++E++D+E V + E+ DLN ++
Sbjct: 106 QPLQLSGLSRSELQDLCQELHARIDVVDEERYDMEAKVNKNITELEDLNQKI 157
>UniRef50_P19351 Cluster: Troponin T, skeletal muscle; n=46;
Pancrustacea|Rep: Troponin T, skeletal muscle -
Drosophila melanogaster (Fruit fly)
Length = 397
Score = 36.3 bits (80), Expect = 0.41
Identities = 17/51 (33%), Positives = 29/51 (56%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 509
KP I+ E ++ ++ E I +LE EK+DLE KR+D ++ +L +
Sbjct: 185 KPLAIEGFGEAKLREKAQELWELIVKLETEKYDLEERQKRQDYDLKELKER 235
>UniRef50_Q23D13 Cluster: Viral A-type inclusion protein repeat
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Viral A-type inclusion protein repeat
containing protein - Tetrahymena thermophila SB210
Length = 1753
Score = 35.1 bits (77), Expect = 0.96
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 372 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 515
D A E+ + ERI LE KFDLE ++ K+ E L QVN
Sbjct: 1105 DQAKEERSNSTLTEKEERIQNLEKSKFDLESSLQDKENECERLVQQVN 1152
>UniRef50_P19429 Cluster: Troponin I, cardiac muscle; n=108;
Chordata|Rep: Troponin I, cardiac muscle - Homo sapiens
(Human)
Length = 210
Score = 34.3 bits (75), Expect = 1.7
Identities = 11/40 (27%), Positives = 27/40 (67%)
Frame = +3
Query: 393 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
++ +C+ H R+ ++++E++D+E V + EI+DL ++
Sbjct: 93 LQDLCRQLHARVDKVDEERYDIEAKVTKNITEIADLTQKI 132
>UniRef50_UPI0000D555FF Cluster: PREDICTED: similar to CG7107-PG,
isoform G isoform 3; n=1; Tribolium castaneum|Rep:
PREDICTED: similar to CG7107-PG, isoform G isoform 3 -
Tribolium castaneum
Length = 352
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/44 (34%), Positives = 27/44 (61%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDME 488
KP +D+ + D ++ ++ + I +LE EK+DLE KR+D +
Sbjct: 186 KPLVLDNLSVDKLREKAQELWDCIVKLETEKYDLEERQKRQDYD 229
>UniRef50_Q23C48 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 1100
Score = 33.5 bits (73), Expect = 2.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 15 SNCGSCWLNHLVGPSSNSCSRTP*TNT 95
S+C C+ N + P++NSC +TP NT
Sbjct: 363 SSCTDCYNNQYLNPNTNSCDQTPPPNT 389
>UniRef50_Q4XS40 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 467
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 366 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 500
N+ + N +K + KDY+E + +D +FD+ ++R D+ I L
Sbjct: 309 NLYNENYIKMKELLKDYNEAVKNKKDTEFDMNVFIERYDIIIDGL 353
>UniRef50_Q9H6N6 Cluster: CDNA: FLJ22037 fis, clone HEP08868; n=28;
Eutheria|Rep: CDNA: FLJ22037 fis, clone HEP08868 - Homo
sapiens (Human)
Length = 746
Score = 32.7 bits (71), Expect = 5.1
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 420 ERIARLEDEKFDLEYIVKRKDMEISDLNSQ 509
+ + +E K DLE +VK++D+EI+ +NS+
Sbjct: 256 DNLNEMERSKLDLEEVVKKRDLEINSVNSK 285
>UniRef50_Q27371 Cluster: Troponin T; n=6; Chromadorea|Rep: Troponin
T - Caenorhabditis elegans
Length = 405
Score = 32.7 bits (71), Expect = 5.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +3
Query: 393 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 509
+K + H RI +LE EK+DLE +R+D ++ +L+ +
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHER 270
>UniRef50_UPI00015556CE Cluster: PREDICTED: similar to hCG2008633,
partial; n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
similar to hCG2008633, partial - Ornithorhynchus
anatinus
Length = 226
Score = 32.3 bits (70), Expect = 6.8
Identities = 10/50 (20%), Positives = 27/50 (54%)
Frame = +3
Query: 360 PKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 509
P ++ ++ +C+ H R+ ++++E++DLE V + E+ + +
Sbjct: 140 PPDVSGLGTPELQELCRTLHSRVDKVDEERYDLEAKVSKNVTEVRRMRGE 189
>UniRef50_A4MI06 Cluster: Putative uncharacterized protein; n=1;
Geobacter bemidjiensis Bem|Rep: Putative uncharacterized
protein - Geobacter bemidjiensis Bem
Length = 404
Score = 32.3 bits (70), Expect = 6.8
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +3
Query: 354 GKPKNIDDANEDTIKRVCKDYHERIARL 437
G+P +D+ + +KRVC+DY E + R+
Sbjct: 158 GRPYALDEQRDLVLKRVCRDYEEAVNRI 185
>UniRef50_Q237L2 Cluster: Kinesin motor domain containing protein;
n=2; Tetrahymena thermophila|Rep: Kinesin motor domain
containing protein - Tetrahymena thermophila SB210
Length = 2307
Score = 32.3 bits (70), Expect = 6.8
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = +3
Query: 387 DTIKRVCKDYHERIARLEDEKFDLE-YIVKRKDMEISDLNSQV 512
D ++++ DY E+I RL+++ +DLE I K K + N QV
Sbjct: 2091 DNLRKINYDYKEKIDRLQEQLYDLEDEIEKEKSVISQQQNEQV 2133
>UniRef50_Q08EW3 Cluster: Oncosphere protein Tso22a; n=9;
Platyhelminthes|Rep: Oncosphere protein Tso22a - Taenia
solium (Pork tapeworm)
Length = 363
Score = 32.3 bits (70), Expect = 6.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 500
+P ID + ++ K+ ++ I RLE +K+DLE R+ ++ +L
Sbjct: 204 QPLQIDGLKGEQLRAKAKELNDIILRLEGDKYDLEQRFSRQSYDMQEL 251
>UniRef50_Q23JA5 Cluster: DnaJ domain containing protein; n=2;
cellular organisms|Rep: DnaJ domain containing protein -
Tetrahymena thermophila SB210
Length = 929
Score = 31.9 bits (69), Expect = 8.9
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISD 497
K KN DD++++ KR K +R RL++EK + + + K+K ME D
Sbjct: 805 KKKNDDDSDDEGNKR--KGKGKRSKRLQEEKDNFDKVQKQKQMEKLD 849
>UniRef50_Q5UZN6 Cluster: Putative uncharacterized protein; n=5;
Halobacteriaceae|Rep: Putative uncharacterized protein -
Haloarcula marismortui (Halobacterium marismortui)
Length = 708
Score = 31.9 bits (69), Expect = 8.9
Identities = 19/52 (36%), Positives = 32/52 (61%)
Frame = +3
Query: 357 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQV 512
+P+ + D +E IKR+ + RI RLE DL+ +KRKD ++S+ + Q+
Sbjct: 458 EPRELTD-DEKEIKRL----NARIERLESHVDDLKETIKRKDDQLSEKDKQL 504
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 365,048,497
Number of Sequences: 1657284
Number of extensions: 5029435
Number of successful extensions: 16301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16297
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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