Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31608
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.30 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   0.92 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   1.6  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 25.4 bits (53), Expect = 0.30
 Identities = 9/39 (23%), Positives = 19/39 (48%)
 Frame = +3

Query: 138 CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSAC 254
           C +G +SY   C+P    + C   + + ++ P  + + C
Sbjct: 38  CIDGINSYICTCKPGFTGSNCQNRINLCDSSPCLNGATC 76


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 0.92
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 266 RVAVARGEVADGVCLLNWHWHV 201
           RVA  R ++  G+ L +WHWH+
Sbjct: 193 RVAYWREDI--GLNLHHWHWHL 212


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 233 GVCLLNWHWHV 201
           G+ L +WHWH+
Sbjct: 202 GINLHHWHWHL 212


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -1

Query: 411 FLFNLSTKLIQFTQYY 364
           FLF LST  I  TQ+Y
Sbjct: 237 FLFVLSTFSICITQFY 252


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,358
Number of Sequences: 336
Number of extensions: 2135
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)