Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31608
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 36 0.026
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 34 0.080
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 33 0.11
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 33 0.11
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 30 0.23
SB_101| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_6035| Best HMM Match : TSP_1 (HMM E-Value=0.046) 31 0.56
SB_7028| Best HMM Match : HYR (HMM E-Value=3.2e-18) 31 0.74
SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38) 30 1.3
SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31) 30 1.3
SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.7
SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3431| Best HMM Match : EGF (HMM E-Value=1.8e-08) 29 2.3
SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41) 29 3.0
SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50835| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_20933| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_31219| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_39509| Best HMM Match : CBM_1 (HMM E-Value=5.5) 28 5.3
SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0) 28 5.3
SB_29080| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_15702| Best HMM Match : Ded_cyto (HMM E-Value=0) 28 5.3
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 28 5.3
SB_30010| Best HMM Match : SMC_hinge (HMM E-Value=2) 28 5.3
SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29) 27 6.9
SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0) 27 6.9
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_31541| Best HMM Match : EGF (HMM E-Value=0) 27 6.9
SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_2045| Best HMM Match : EGF (HMM E-Value=0) 27 6.9
SB_46470| Best HMM Match : CRAM_rpt (HMM E-Value=6.1) 27 9.2
SB_38564| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17) 27 9.2
SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41) 27 9.2
SB_5962| Best HMM Match : EGF (HMM E-Value=8.5e-09) 27 9.2
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 35.5 bits (78), Expect = 0.026
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Frame = +3
Query: 87 PAHPRGCVWI-LGKCSRNCEEGTHSYTTGCR---PKMPEATCDVPVPVQETHPICDFSAC 254
P H +W CS +C GT + C PK TCDV P ET P C+ C
Sbjct: 381 PIHGGYTMWSNFTTCSVSCGNGTRTRIRNCTNPPPKHNGRTCDVLGPRIETQP-CNTFYC 439
Query: 255 YCDPGTVRDTKTKKCVK 305
D G + ++ +C K
Sbjct: 440 PVDGGYTQWSEYSQCSK 456
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = +3
Query: 87 PAHPRGCVW-ILGKCSRNCEEGTHSYTTGCRPKMPE 191
P H W +CS++CE GT C +P+
Sbjct: 265 PVHGNYTAWSTFTECSKSCENGTRYRYRNCSQPLPQ 300
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 33.9 bits (74), Expect = 0.080
Identities = 20/66 (30%), Positives = 26/66 (39%)
Frame = +3
Query: 102 GCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCDPGTVRD 281
G W C+ +C G + RP +C P P +C S+C CDP D
Sbjct: 690 GTGWTGPSCNASCSAGRYGINCVARPGWTGKSCKDPCPAGRYGMMC-ASSCRCDPSKT-D 747
Query: 282 TKTKKC 299
K K C
Sbjct: 748 VK-KPC 752
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +3
Query: 120 GKCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCDPGTVRDTKTKKC 299
G C ++ + G S+ C P TC +P P + C C C D++T KC
Sbjct: 142 GTCKQSLQNG--SFVCACAPGFHGNTCQLPCPDGQWGIDCK-GVCTCSEYGSCDSRTGKC 198
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCDP 266
C++ +T C P TC P+ + E HP + + C DP
Sbjct: 139 CQDLVADFTCHCYPGFTGETCATPIDLCEAHPCQNNATCRMDP 181
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCDP 266
C++ +T C P TC P+ + E HP + + C DP
Sbjct: 952 CQDLVADFTCHCYPGFTGETCATPIDLCEAHPCQNNATCRMDP 994
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 29.9 bits (64), Expect(2) = 0.23
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 2/60 (3%)
Frame = +3
Query: 6 RCLVMLCALIAVALAAPNTIGDVPTAL--PAHPRGCVWILGKCSRNCEEGTHSYTTGCRP 179
+CL C + + + GD+ L P+ R C G CS+NC E C P
Sbjct: 3336 KCLNRRCVPVRAVCDSNDDCGDISDELQCPSTNRTCAVNNGGCSQNCTERDSHVICSCWP 3395
Score = 21.0 bits (42), Expect(2) = 0.23
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDC 317
C C PG T KC + +C
Sbjct: 3391 CSCWPGFELKPFTNKCEDVNEC 3412
>SB_101| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 237 CDFSACYCDPGTVRDTKTKKCVKLEDCSK 323
CD++ C C P KCV L+DC+K
Sbjct: 4 CDYAVCVCGPCGPSVDCNSKCVLLKDCNK 32
>SB_44750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2190
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +3
Query: 87 PAHPRGCVWI-LGKCSRNCEEGTHSYTTGCRPKMPEA---TCDVPVPVQETHPICDFSAC 254
P H W G C+R C+ G H T C +P A C + P +E+ C+ + C
Sbjct: 429 PIHGGFSEWTDFGNCTRECDGGVHYRTRSCTNPVPFAGGEGCSLLGPARESRQ-CNTNPC 487
>SB_6035| Best HMM Match : TSP_1 (HMM E-Value=0.046)
Length = 173
Score = 31.1 bits (67), Expect = 0.56
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 2/65 (3%)
Frame = +3
Query: 75 PTALPAHPRGCVWILGKCSRNCEEGTHSYTTGC--RPKMPEATCDVPVPVQETHPICDFS 248
P H R CV +CS+ C G + T C R P C ++ T C +
Sbjct: 54 PRIFEVHQRSCVLFFRQCSKTCGRGLQTRTVECFDRDGKPSFLCTDESRMRSTKH-CTLN 112
Query: 249 ACYCD 263
C D
Sbjct: 113 DCVDD 117
>SB_7028| Best HMM Match : HYR (HMM E-Value=3.2e-18)
Length = 187
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +3
Query: 150 THSYTTGCRPKMPEATCDVPV--PVQETHPICDFSACYCDPGTVRDTKTKKCVKLE 311
T+ TTG +P P+AT + + P TH + A G K +CV E
Sbjct: 12 TNGGTTGTQPMSPKATVSISIDMPHTSTHGTMEAEAALAHKGVQTLDKVDRCVSAE 67
>SB_43576| Best HMM Match : EGF_CA (HMM E-Value=2.7e-38)
Length = 641
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDC 317
C CD G D K +KC+ +++C
Sbjct: 337 CSCDTGLAWDEKKRKCIDVDEC 358
>SB_38887| Best HMM Match : EGF_CA (HMM E-Value=6.2e-31)
Length = 131
Score = 29.9 bits (64), Expect = 1.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDC 317
C CD G D K +KC+ +++C
Sbjct: 28 CSCDTGLAWDEKKRKCIDVDEC 49
>SB_3454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 123
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/59 (25%), Positives = 21/59 (35%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCDPGTVRDTKTKKCVKLED 314
C E +Y C +C+V + C C C+PG + D T ED
Sbjct: 60 CSESLGTYRCNCMSGWQGLSCEVGCGSCHPNAYCMMDKCVCNPGYIGDGITCDVTGHED 118
>SB_51974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3474
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/77 (19%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 117 LGKCSRNCEEGTHSYTTGCRPK----MPEATCDVPVPVQETHPICDFSACYCDPGTVRDT 284
+ +C++ C S+T C + + E + ++ + Q + + C C PG
Sbjct: 560 IAQCNQTCANIPGSFTCSCDQRNCLDIDECSSNLHICNQTCNNVPGSYYCTCFPGFYLMM 619
Query: 285 KTKKCVKLEDCSK*WNQ 335
+ + CV +++C+ ++Q
Sbjct: 620 EDQSCVDIDECAAGFHQ 636
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Frame = +3
Query: 105 CVWILGKCSRNCEEGTHSYTTGCRP------------KMPEATCDVPVPVQETHPICDFS 248
CV KC + C SY C P + E + Q +
Sbjct: 712 CVTRSHKCFQQCVNTRGSYKCSCNPGFVLASDNFGCLDINECKSSIKYCSQGCKNLYGTF 771
Query: 249 ACYCDPGTVRDTKTKKCVKLEDCS 320
+C+C G D+ + C+ +E+CS
Sbjct: 772 SCFCYRGYALDSDKRTCIDVEECS 795
Score = 25.0 bits (52), Expect(2) = 3.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDCS 320
C C PG + K C+ +++CS
Sbjct: 853 CSCFPGYQQGPKNDSCLDVDECS 875
Score = 21.8 bits (44), Expect(2) = 3.1
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +3
Query: 126 CSRNCEEGTHSYTTGCRP 179
CS NC SY C P
Sbjct: 840 CSHNCTNTPGSYRCSCFP 857
>SB_3431| Best HMM Match : EGF (HMM E-Value=1.8e-08)
Length = 480
Score = 29.1 bits (62), Expect = 2.3
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = +3
Query: 135 NCEEGTHSYTTGCRPKMPEATCDVPVPVQETHPIC-DFSACY 257
NC + ++YT C+P C++ V+ P C FS Y
Sbjct: 207 NCTDQVNNYTCTCQPGYTGRNCEIACSVRIFKPACFTFSDVY 248
>SB_20062| Best HMM Match : Tsg101 (HMM E-Value=0.41)
Length = 686
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 110 LDPRKMLKELRRRHPQLHDRLPPEDA*GYM*RASASSRDTP 232
LDPR + ++RR H + R+ P A G R+S SS P
Sbjct: 358 LDPRVLFLQVRRSHEEGVARVIPGSAVGESGRSSRSSSSPP 398
>SB_18656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3292
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Frame = +3
Query: 198 CDVPVPVQETHPICDFSA--CYCDPGTVRDTKTKKCVK 305
C+ PV +P+C+ + CYC+P R K +C+K
Sbjct: 2006 CNCPVGAN-FNPVCNKTTGECYCNPYHYRSPKGNECLK 2042
>SB_50835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = +2
Query: 29 FNRGSSCRSQHHRRCPDSLARASSWLRLDPRKMLKELRRRHPQL 160
F R SC HH C LAR+S WL ++ +L E R L
Sbjct: 30 FWRAFSCLQFHH--CCVFLARSSLWLLMEEEVVLMEEERAQTDL 71
>SB_20933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = +3
Query: 147 GTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCD 263
G+HS T +P C P+++ P DF+ Y D
Sbjct: 127 GSHSNTNNIYEGLPADYCGSTTPLKDDGPTADFNPIYDD 165
>SB_31219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 517
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = +3
Query: 81 ALPAHPRGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHP-ICDFSACY 257
ALP PR C+ + +R C+E G M E D+P + P I +
Sbjct: 270 ALPGTPRNCMSMKEIINRACDEAKTYKKAGVDAVMVENMNDLPYLNRHVGPEITSAMSVI 329
Query: 258 CDPGTVRDTKTKKC 299
C+ R+ KT C
Sbjct: 330 CNE-VKREVKTMPC 342
>SB_39509| Best HMM Match : CBM_1 (HMM E-Value=5.5)
Length = 78
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 237 CDFSACY---CDPGTVRDTKTKKCVKLEDCSK 323
CD++ C C P +V + KCV L+DC+K
Sbjct: 4 CDYAVCVGGPCGP-SVDCSSNSKCVLLKDCNK 34
>SB_30484| Best HMM Match : Ded_cyto (HMM E-Value=0)
Length = 1025
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 65 RRCPDSLARASSWLRLDPRKMLKELRRRHPQLHDRLPP 178
+RC D+L ++ D R KEL R + +L ++L P
Sbjct: 972 KRCGDALHVNKQLIKSDQRAYQKELERNYHKLMEQLEP 1009
>SB_29080| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 237 CDFSACY---CDPGTVRDTKTKKCVKLEDCSK 323
CD++ C C P +V + KCV L+DC+K
Sbjct: 4 CDYTVCVGAPCGP-SVDCSSNSKCVLLKDCNK 34
>SB_15702| Best HMM Match : Ded_cyto (HMM E-Value=0)
Length = 331
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 65 RRCPDSLARASSWLRLDPRKMLKELRRRHPQLHDRLPP 178
+RC D+L ++ D R KEL R + +L ++L P
Sbjct: 200 KRCGDALHVNKQLIKSDQRAYQKELERNYHKLMEQLEP 237
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +3
Query: 123 KCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSAC 254
KC+ +C +G S + C PE V E CD+ C
Sbjct: 1496 KCTSSCGKGVRSRSRSCTAPAPELGGKPCVGPTEQTMACDYGDC 1539
>SB_30010| Best HMM Match : SMC_hinge (HMM E-Value=2)
Length = 971
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
Frame = +3
Query: 237 CDFSACY---CDPGTVRDTKTKKCVKLEDCSK 323
CD++ C C P +V + KCV L+DC+K
Sbjct: 4 CDYAVCVGGPCGP-SVDCSSNSKCVLLKDCNK 34
>SB_47717| Best HMM Match : EGF (HMM E-Value=1.9e-29)
Length = 214
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 126 CSRN--CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACY 257
CS + C +G +SYT C +TC+V V ++P + C+
Sbjct: 95 CSEHGACIDGVNSYTCACNLGYTGSTCNVTVNDCISNPCIHGATCH 140
>SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 372
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Frame = +3
Query: 123 KCSRNCEEGTHSYTTGCRPKMPE---ATCDVPVPVQETHP----ICDFSACYCD 263
KCS++C G + C P+ TC P ET C YCD
Sbjct: 13 KCSKSCAGGVQMRSRECNNPEPQYGGKTCSYLGPANETRACNTFFCPIDGGYCD 66
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 126 CSRN--CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACY 257
CS + C +G +SYT C +TC+V V ++P + C+
Sbjct: 674 CSEHGACIDGVNSYTCACNLGYTGSTCNVTVNDCISNPCIHGATCH 719
>SB_31541| Best HMM Match : EGF (HMM E-Value=0)
Length = 268
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/47 (25%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 GKCSRN--CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSAC 254
G C C +G + YT C P A C+ + +P + C
Sbjct: 121 GPCQNGATCNDGVNKYTCSCIPGFTGANCETDMDECAGNPCANGGTC 167
>SB_15410| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1147
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDC 317
C C PG D KT C+ DC
Sbjct: 970 CNCPPGIDLDRKTNMCITGSDC 991
>SB_2045| Best HMM Match : EGF (HMM E-Value=0)
Length = 1101
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/40 (25%), Positives = 17/40 (42%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACY 257
C +G + YT C P CD+ + + +P C+
Sbjct: 849 CVDGVNRYTCTCHPGWNGTKCDIDIDECDPNPCLRGGQCH 888
>SB_46470| Best HMM Match : CRAM_rpt (HMM E-Value=6.1)
Length = 78
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 237 CDFSACYCDPG--TVRDTKTKKCVKLEDCSK 323
CD++ C P +V + KCV L+DC+K
Sbjct: 4 CDYTVCVGGPCGLSVDCSSNSKCVLLKDCNK 34
>SB_38564| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 61
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 237 CDFSACYCDPGTVRDTKTKKCVKLEDCSK 323
CD++ C P KCV L+DC+K
Sbjct: 4 CDYAVCVGGPCGPSVDCNSKCVLLKDCNK 32
>SB_27096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 33 IAVALAAPNTIGDVPTALPAHP 98
I V L A N I DVP +PA P
Sbjct: 607 ITVGLVAVNVIADVPEIVPADP 628
>SB_16748| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 280
Score = 27.1 bits (57), Expect = 9.2
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKMPEATCD 203
C +G +SYT C+P C+
Sbjct: 257 CNDGVNSYTCSCKPGFTGTNCE 278
>SB_16252| Best HMM Match : Astacin (HMM E-Value=2.8e-17)
Length = 580
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/55 (27%), Positives = 21/55 (38%)
Frame = +3
Query: 99 RGCVWILGKCSRNCEEGTHSYTTGCRPKMPEATCDVPVPVQETHPICDFSACYCD 263
R VW CS+ C +GT + T C P+ V +C + C D
Sbjct: 313 RWSVW--SACSQTCGDGTQTRTRVCDDPAPKNGGSACVGDSSQAQVCKIATCGLD 365
>SB_6742| Best HMM Match : EGF_CA (HMM E-Value=5.40004e-41)
Length = 653
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 252 CYCDPGTVRDTKTKKCVKLEDCSK*W 329
C C G + + KKCV ++C++ W
Sbjct: 478 CQCPLGYSMNNEMKKCVDRDECAEDW 503
>SB_5962| Best HMM Match : EGF (HMM E-Value=8.5e-09)
Length = 260
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = +3
Query: 138 CEEGTHSYTTGCRPKM----PEATCDVPVPVQETHPICDFS 248
C +G ++YT C K E +CD+ V VQ+ + I D S
Sbjct: 16 CNDGVNNYTCVCLSKFIGANCETSCDLAVGVQDRNIIPDNS 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,623,647
Number of Sequences: 59808
Number of extensions: 282623
Number of successful extensions: 905
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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