Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31608
         (516 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    25   0.61 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   1.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           23   2.5  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    22   3.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.5  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 24.6 bits (51), Expect = 0.61
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -2

Query: 266 RVAVARGEVADGVCLLNWHWHV 201
           RVA  R ++  G+ L +WHWH+
Sbjct: 195 RVAYWREDI--GINLHHWHWHL 214


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 243 FSACYCDPGTVRDTKTKK 296
           F+ C CDPG  R  K  K
Sbjct: 293 FTECRCDPGYFRAEKDPK 310



 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 252 CYCDPGTVRDTKTKKCVK 305
           C+C PG   D + ++C +
Sbjct: 247 CHCKPGYQADVEKQECTE 264


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 29  FNRGSSCRSQHHRRCPDSLA 88
           F + SS R QHH   PD LA
Sbjct: 340 FFKDSSFRIQHHFFYPDPLA 359


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 120 RGSKRSHEDARARLSGHLRWCWER 49
           +GS+ +H +       HLR C E+
Sbjct: 47  QGSRTTHNELEKNRRAHLRNCLEK 70


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 237 CDFSACYCD 263
           CDF AC C+
Sbjct: 750 CDFDACDCE 758


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,375
Number of Sequences: 438
Number of extensions: 2459
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)