Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31603
(460 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 284 3e-77
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 279 6e-76
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 277 4e-75
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 277 4e-75
SB_56| Best HMM Match : Actin (HMM E-Value=0) 275 1e-74
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 186 1e-47
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 123 8e-29
SB_54| Best HMM Match : Actin (HMM E-Value=0) 70 8e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 59 2e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 56 1e-08
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 56 1e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 1e-08
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 54 8e-08
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 5e-07
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 2e-06
SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6) 30 0.80
SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7) 29 1.4
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 28 3.2
SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.3
SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29) 28 4.3
SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 28 4.3
SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9) 28 4.3
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 27 5.6
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 7.5
SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2) 27 7.5
SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 27 9.9
SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011) 27 9.9
SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08) 27 9.9
SB_23441| Best HMM Match : IncA (HMM E-Value=2.5) 27 9.9
SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27) 27 9.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 284 bits (696), Expect = 3e-77
Identities = 128/134 (95%), Positives = 129/134 (96%)
Frame = +3
Query: 57 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 236
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 237 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 417 TQIMFETLNXPVMY 458
TQIMFET N P MY
Sbjct: 121 TQIMFETFNSPAMY 134
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 279 bits (685), Expect = 6e-76
Identities = 125/134 (93%), Positives = 128/134 (95%)
Frame = +3
Query: 57 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 236
M DDD+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 237 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 417 TQIMFETLNXPVMY 458
TQIMFET N P MY
Sbjct: 121 TQIMFETFNSPAMY 134
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 277 bits (678), Expect = 4e-75
Identities = 125/134 (93%), Positives = 128/134 (95%)
Frame = +3
Query: 57 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 236
M DD++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 237 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKM 416
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 417 TQIMFETLNXPVMY 458
TQIMFET N P MY
Sbjct: 121 TQIMFETFNSPAMY 134
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 277 bits (678), Expect = 4e-75
Identities = 125/132 (94%), Positives = 127/132 (96%)
Frame = +3
Query: 63 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 242
+DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 243 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQ 422
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 423 IMFETLNXPVMY 458
IMFET N P MY
Sbjct: 122 IMFETFNSPAMY 133
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 275 bits (674), Expect = 1e-74
Identities = 124/132 (93%), Positives = 127/132 (96%)
Frame = +3
Query: 63 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 242
+D+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 243 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQ 422
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 423 IMFETLNXPVMY 458
IMFET N P MY
Sbjct: 122 IMFETFNSPAMY 133
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 186 bits (452), Expect = 1e-47
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +3
Query: 63 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 242
DDDVAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 243 RGILTLKYPIEHGIITNWDDMEKIWHHTF 329
RGILTLKYPIEHGI+TNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 402 NREKMTQIMFETLNXPVMY 458
N + M +IMFET N P MY
Sbjct: 78 NWDDMEKIMFETFNSPAMY 96
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 123 bits (296), Expect = 8e-29
Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 3/131 (2%)
Frame = +3
Query: 75 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 248
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 249 ILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPXXNREKMTQI 425
+L + YP+++GI+ NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 426 MFETLNXPVMY 458
MFE +Y
Sbjct: 127 MFENYQFEGVY 137
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 70.1 bits (164), Expect = 8e-13
Identities = 31/50 (62%), Positives = 38/50 (76%)
Frame = +3
Query: 309 KIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETLNXPVMY 458
K+W H F ++LRV E+ PVLLTEAPLNP NRE+M Q+MFE+ N P MY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMY 2178
Score = 60.5 bits (140), Expect = 7e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +3
Query: 24 ASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 182
AS T+ F+ V +V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2080 ASVTKQQAAFEQNGGTV--VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.3 bits (137), Expect = 2e-09
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 81 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 182
LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1359 LVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Frame = +3
Query: 18 IPASPTQTHTKFKMCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG 197
IP + + ++ FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G
Sbjct: 683 IPRTKKRRYS-FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIG 741
Query: 198 --MGQKD-SYVGDEAQSKRGILTL 260
+ KD GD A +K G++ L
Sbjct: 742 DNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 56.4 bits (130), Expect = 1e-08
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +3
Query: 267 PIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXXNREKMTQIMFETLNX 446
PI+ G+I +WD EKI + + ++ HP+L++EA N REK+T++MFE N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 447 PVMY 458
P +
Sbjct: 63 PAFF 66
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.0 bits (129), Expect = 1e-08
Identities = 25/60 (41%), Positives = 34/60 (56%)
Frame = +3
Query: 195 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLL 374
G+ D ++GDEA K T K+PI H I+ +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 53.6 bits (123), Expect = 8e-08
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +3
Query: 357 EHPVLLTEAPLNPXXNREKMTQIMFETLNXPVMY 458
+HPVLLTEAPLNP NREK ++ FET N P ++
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALF 159
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 50.8 bits (116), Expect = 5e-07
Identities = 21/39 (53%), Positives = 31/39 (79%)
Frame = -3
Query: 179 VARATHDGREDGAGRVVAGETGLAHAGAIVDYKRSNIVV 63
+AR+ DG E+G+G +V+GETGLAH GAI+D + +I+V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 2e-06
Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Frame = +3
Query: 72 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 251
+A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 233 MATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDY 284
Query: 252 LTLKY--PIEHGIITNWDDMEKIWHHTFYNE 338
L Y P + G + NWD ++IW +TF E
Sbjct: 285 SALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_25667| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 175
Score = 32.7 bits (71), Expect = 0.15
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +1
Query: 88 STMAPACARPVSPATTRPAPSSRPSWVALATRA*WSVWARKTPTWVTRP 234
S P+ R TT+P P +PSWV + + W TW RP
Sbjct: 36 SPSKPSDTRIADTTTTKPFPGYQPSWVKVK----YGAWYLNPKTWKARP 80
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 31.9 bits (69), Expect = 0.26
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 156
S C T+L+R T+ APA +P+SPAT P +R
Sbjct: 632 SSCLATLLVRPLETIPAPAPTKPISPATPASGPPTR 667
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.1 bits (67), Expect = 0.46
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +3
Query: 258 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPXXNRE 410
L+ P + ++T+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_20236| Best HMM Match : Pec_lyase_N (HMM E-Value=6.6)
Length = 697
Score = 30.3 bits (65), Expect = 0.80
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 156
S C T+L+R L +T APA P SPAT P R
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPATPASGPPIR 56
>SB_40933| Best HMM Match : DUF548 (HMM E-Value=1.7)
Length = 682
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +1
Query: 43 TQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 156
T S C T+L+R T+ APA P SPAT P R
Sbjct: 109 TSLSSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 147
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 37 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 162
K T ++ ATT + +T PA P +P TT P ++ P+
Sbjct: 63 KPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 27.5 bits (58), Expect = 5.6
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 37 KHTQSSRCATTMLLRL*STMAPACARPVSPATTRPAPSSRPS 162
K T ++ ATT + +T PA P P TT P ++ P+
Sbjct: 133 KPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_56225| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 494
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 156
S C T+L+R T+ APA P SPAT P R
Sbjct: 72 SSCLATLLVRPLETIPAPAPTTPTSPATPASGPPIR 107
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 184 PWWRGRPTMDGKTARGASSPAKPALHMPEP 95
P W + G T R PAKP+L++P P
Sbjct: 530 PKWLQQVKDGGNTNRRTRIPAKPSLNLPSP 559
>SB_43553| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.29)
Length = 1851
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPAT 132
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_37603| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1411
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPAT 132
S C T+L+R L +T APA P SPAT
Sbjct: 21 SSCLATLLVRPLETTPAPAPTTPTSPAT 48
>SB_12700| Best HMM Match : POPLD (HMM E-Value=1.9)
Length = 461
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPAT 132
S C T+L+R L +T APA P SPAT
Sbjct: 14 SSCLATLLVRPLETTPAPAPTTPTSPAT 41
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 27.5 bits (58), Expect = 5.6
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +3
Query: 54 KMCDDDVAALVVDNG-SGMCKAGFAGD 131
++CD D + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 27.5 bits (58), Expect = 5.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 178 WRGRPTMDGKTARGASSPAKPALHMPEP 95
W + G T R PAKPAL++P P
Sbjct: 72 WLQQVKDGGNTNRRTRIPAKPALNLPSP 99
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1
Query: 154 GKTARGASSPAKPALHMPEP 95
G T R PAKPAL++P P
Sbjct: 80 GNTNRRTRIPAKPALNLPSP 99
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 7.5
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 75 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 179
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_15319| Best HMM Match : Transposase_9 (HMM E-Value=3.2)
Length = 782
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 SRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 156
S C T+++R T+ APA P SPAT P R
Sbjct: 51 SSCLATLVVRPLETIPAPAPTTPTSPATPASGPPIR 86
>SB_56934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2541
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPAT 132
S C T L+R L +T APA P SPAT
Sbjct: 523 SSCLATFLVRTLETTPAPAPTTPTSPAT 550
>SB_54780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 275
Score = 26.6 bits (56), Expect = 9.9
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 50 VQDVRRRCCCACSRQW 97
V+D+ CCAC R+W
Sbjct: 108 VKDILSSVCCACPRRW 123
>SB_20870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2032
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -3
Query: 257 SEDTSLALGLVTHVGVFLAHTDHHALVARATHD 159
S DT+ L LV+HVG + A D L HD
Sbjct: 1835 SRDTTCRLWLVSHVGGWAADVDKSPLQTLYGHD 1867
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 26.6 bits (56), Expect = 9.9
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 3/103 (2%)
Frame = +3
Query: 141 RAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWH 320
R + I RPR++ +MVG + V A S+ +TL HG ++ + +W
Sbjct: 153 RPPYEHITTRPRYEHIMVGTLFEHFTV--RATSRHEYITLWTRTHHG--ARYEHI-TVWT 207
Query: 321 HTFYNELRV---APEEHPVLLTEAPLNPXXNREKMTQIMFETL 440
Y + P EH T P R + IM TL
Sbjct: 208 RPPYEHITKWTRPPYEHITKWTRPPYEHITTRPRYEHIMVGTL 250
>SB_37150| Best HMM Match : 7tm_1 (HMM E-Value=0.011)
Length = 211
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +1
Query: 52 SRCATTMLLR-L*STMAPACARPVSPATTRPAPSSR 156
S C T+L+R L + APA P SPAT A R
Sbjct: 148 SSCLATLLVRPLETAPAPAPTTPTSPATPASAAPIR 183
>SB_28937| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-08)
Length = 1258
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 76 LRL*STMAPACARPVSPATTRPAP 147
L+L ST+ P+ P++PA P P
Sbjct: 185 LQLLSTLIPSTTAPINPAAINPTP 208
>SB_23441| Best HMM Match : IncA (HMM E-Value=2.5)
Length = 927
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 271 MGYFRVRIPLLLWASSPT*ESFWPIPTITP 182
MGY ++ P +W + + P PT+TP
Sbjct: 363 MGYVVIKAPYPVWTLLSSTPTITPTPTVTP 392
>SB_8646| Best HMM Match : 7tm_1 (HMM E-Value=1.2e-27)
Length = 522
Score = 26.6 bits (56), Expect = 9.9
Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +1
Query: 28 PQHKHTQSSRCATTMLLRL*STM-APACARPVSPATTRPAPSSR 156
P T S C +L+R T+ APA P SPAT P R
Sbjct: 405 PLSAKTIVSSCLAPLLVRPLETIPAPAPTTPTSPATPASGPPIR 448
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,060,831
Number of Sequences: 59808
Number of extensions: 301876
Number of successful extensions: 1000
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 996
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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