Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31602
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical pr...    45   4e-05
AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical...    44   9e-05
Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical pr...    39   0.002
AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical...    33   0.092
Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical...    30   1.1  
AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical ...    29   1.5  
AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical ...    29   2.6  
AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical ...    28   4.6  
AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine re...    28   4.6  

>U67956-1|AAB07690.2|  157|Caenorhabditis elegans Hypothetical
           protein F16F9.1 protein.
          Length = 157

 Score = 44.8 bits (101), Expect = 4e-05
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +3

Query: 9   LPYCMDSCMNSDHYCPNCNAYIGTYTR*F 95
           +P+C+DSC ++ HYCP CNA +G   R F
Sbjct: 129 VPFCLDSCKDAHHYCPRCNALLGIKKRIF 157


>AL110500-20|CAI79282.1|  110|Caenorhabditis elegans Hypothetical
           protein Y87G2A.19 protein.
          Length = 110

 Score = 43.6 bits (98), Expect = 9e-05
 Identities = 13/27 (48%), Positives = 23/27 (85%)
 Frame = +3

Query: 9   LPYCMDSCMNSDHYCPNCNAYIGTYTR 89
           +P+C+++  +++HYCP+C A+IGTY R
Sbjct: 79  VPFCVETFKDAEHYCPSCRAWIGTYRR 105


>Z47069-3|CAE17781.1|  141|Caenorhabditis elegans Hypothetical
           protein F36G3.3 protein.
          Length = 141

 Score = 39.1 bits (87), Expect = 0.002
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 9   LPYCMDSCMNSDHYCPNCNAYIGTYTR 89
           LP+C+ SC +  H CPNC A IG + R
Sbjct: 114 LPFCLRSCKDIIHTCPNCRAMIGVHRR 140


>AL110500-18|CAB54478.1|  118|Caenorhabditis elegans Hypothetical
           protein Y87G2A.18 protein.
          Length = 118

 Score = 33.5 bits (73), Expect = 0.092
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +3

Query: 6   CLPYCMDSCMNSDHYCPNCNAYIGTYTR 89
           C+P+ +D  ++ +H CP C  ++G + R
Sbjct: 90  CVPFFLDQLLDVNHSCPACKKFLGRFNR 117


>Z81529-2|CAB04298.2|  133|Caenorhabditis elegans Hypothetical
           protein F35E8.2 protein.
          Length = 133

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -2

Query: 146 VQIIEWHTGIRNTFTIMKLSCIGSNVGVAVWT 51
           VQ++ W + +R    ++ LSC   N    +WT
Sbjct: 3   VQVVSWFSWLREPIQLLDLSCTSFNGTAFIWT 34


>AL032627-14|CAA21549.1|  386|Caenorhabditis elegans Hypothetical
           protein Y41C4A.11 protein.
          Length = 386

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 3   VCLPYCMDSCMNSDHYCPNCNAYIGTYTR 89
           +CL  C D   + DH CPNC   + T  R
Sbjct: 72  ICL--CFDVSKDVDHNCPNCGLLLATSNR 98


>AF068714-8|AAC17809.2|   86|Caenorhabditis elegans Hypothetical
           protein B0348.2 protein.
          Length = 86

 Score = 29.5 bits (63), Expect = 1.5
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +3

Query: 3   VCLPYCMDSCMNSDHYCPNCNAYI 74
           +C   C DS  ++ HYCP+C   +
Sbjct: 56  ICYWLCCDSSKDTMHYCPSCGTLL 79


>AF068714-9|AAC17810.1|   87|Caenorhabditis elegans Hypothetical
           protein B0348.1 protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +3

Query: 3   VCLPYCMDSCMNSDHYCPNCNAYIGT 80
           +C   C  S  ++ HYCP+C   + T
Sbjct: 56  ICYWLCCQSSKDTLHYCPSCGTLLAT 81


>AL032626-6|CAA21526.1|  132|Caenorhabditis elegans Hypothetical
           protein Y37D8A.6 protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 15  YCMDSCMNSDHYCPNCNAYIGTYTR 89
           +C+D   +S H CPNC   + +Y R
Sbjct: 108 FCLDGFKDSRHSCPNCGTIL-SYKR 131


>AF125956-5|AAD14722.2|  353|Caenorhabditis elegans Serpentine
           receptor, class h protein80 protein.
          Length = 353

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 19/76 (25%), Positives = 31/76 (40%)
 Frame = +3

Query: 51  CPNCNAYIGTYTR*FHNCERIAYSCMPFDDLHLYSFVFIFHIHMINLKFGLMLYSSVEYI 230
           CP C  ++ ++    H     A   +PF     +  +F    HM N K  L+ +     +
Sbjct: 15  CPKCEYFLCSWQDYAHTMHIFAGIAIPFYSFGFHCILFKTPKHMNNSKVSLLNFHFWSCL 74

Query: 231 LQLHLKALAVVNVLYL 278
           L +   AL V   L+L
Sbjct: 75  LDIIFSAL-VTPYLFL 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,226,704
Number of Sequences: 27780
Number of extensions: 224537
Number of successful extensions: 465
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)