Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31598
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 355 1e-98
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 355 1e-98
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 353 3e-98
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 352 9e-98
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 352 9e-98
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 349 9e-97
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 349 9e-97
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 349 9e-97
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 349 9e-97
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 322 9e-89
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 295 9e-81
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 281 2e-76
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 204 2e-53
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 155 2e-38
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 130 5e-31
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 99 2e-21
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 93 1e-19
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 71 4e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 68 4e-12
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 56 2e-08
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 56 2e-08
At5g43500.2 68418.m05318 expressed protein 36 0.021
At5g43500.1 68418.m05319 expressed protein 36 0.021
At3g24130.1 68416.m03030 pectinesterase family protein contains ... 29 1.9
At2g19780.1 68415.m02311 leucine-rich repeat family protein / ex... 29 1.9
At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2 (... 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 1.9
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 1.9
At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1) c... 29 2.5
At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1) c... 29 2.5
At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I) i... 28 4.3
At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1 (... 27 5.7
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 27 7.5
At3g15400.1 68416.m01954 anther development protein, putative si... 27 7.5
At2g39480.1 68415.m04845 ABC transporter family protein related ... 27 7.5
At2g31900.1 68415.m03897 myosin family protein contains Pfam pro... 27 7.5
At3g28790.1 68416.m03593 expressed protein 27 9.9
At1g69670.1 68414.m08018 cullin, putative contains similarity to... 27 9.9
At1g26830.1 68414.m03270 cullin, putative similar to Cullin homo... 27 9.9
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
EGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 169 EGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 355 bits (872), Expect = 1e-98
Identities = 165/171 (96%), Positives = 169/171 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHP+LLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
EGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLC
Sbjct: 169 EGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLC 219
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 353 bits (869), Expect = 3e-98
Identities = 164/170 (96%), Positives = 170/170 (100%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+KEKL
Sbjct: 169 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVKEKL 218
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 352 bits (865), Expect = 9e-98
Identities = 164/170 (96%), Positives = 169/170 (99%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 169 EGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKL 218
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 352 bits (865), Expect = 9e-98
Identities = 164/170 (96%), Positives = 169/170 (99%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+KEKL
Sbjct: 169 EGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMKEKL 218
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 349 bits (857), Expect = 9e-97
Identities = 164/170 (96%), Positives = 167/170 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
MGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLT
Sbjct: 49 MGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 169 EGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIKEKL 218
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 349 bits (857), Expect = 9e-97
Identities = 161/170 (94%), Positives = 168/170 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
M QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 169 EGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 349 bits (857), Expect = 9e-97
Identities = 161/170 (94%), Positives = 168/170 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
M QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 169 EGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 349 bits (857), Expect = 9e-97
Identities = 161/170 (94%), Positives = 168/170 (98%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
M QKD+YVGDEAQSKRGILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+APEEHPVLLT
Sbjct: 49 MNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLT 108
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY
Sbjct: 109 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 168
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKL 512
EG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIKEKL
Sbjct: 169 EGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKL 218
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 322 bits (791), Expect = 9e-89
Identities = 143/171 (83%), Positives = 163/171 (95%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
M +KD++VGDEAQ++RGIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+LLT
Sbjct: 50 MDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLT 109
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPK NREKMTQIMFE+F P+MY+ IQAVLSLY+SGRTTGIVLDSGDGVSHTVPIY
Sbjct: 110 EAPLNPKVNREKMTQIMFESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIY 169
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
EGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIKEKLC
Sbjct: 170 EGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKEKLC 220
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 295 bits (725), Expect = 9e-81
Identities = 132/171 (77%), Positives = 154/171 (90%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
+ +SYVG+E + R ILTLK P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVLLT
Sbjct: 38 LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLT 97
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTTG+VLD G+ VSHTVP+Y
Sbjct: 98 EAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHTVPVY 157
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
EGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIKEKLC
Sbjct: 158 EGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLC 208
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 281 bits (689), Expect = 2e-76
Identities = 129/169 (76%), Positives = 152/169 (89%)
Frame = +3
Query: 3 MGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
M + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRVAPEEHPVLLT
Sbjct: 4 MNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLT 63
Query: 183 EAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY 362
EAPLNPKA+REKMTQIMFETF P+MY+ +QA LSL+ASGRTTG VLDSGDGVS+ VPIY
Sbjct: 64 EAPLNPKADREKMTQIMFETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIY 123
Query: 363 EGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEK 509
EG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIKE+
Sbjct: 124 EGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIKEQ 169
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 204 bits (499), Expect = 2e-53
Identities = 87/168 (51%), Positives = 120/168 (71%)
Frame = +3
Query: 12 KDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 191
KD VG+ R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 192 LNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY 371
LNP NREKM + MFE +N +++ IQAVL+LYA G TG+V+DSGDGV+H VP+ +GY
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGY 170
Query: 372 ALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IKEKLC
Sbjct: 171 SFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLC 218
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 155 bits (375), Expect = 2e-38
Identities = 75/175 (42%), Positives = 109/175 (62%), Gaps = 8/175 (4%)
Frame = +3
Query: 15 DSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 185
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 186 APLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRT-----TGIVLDSGDGVSHT 350
+PL P +RE +I+FETFN P +Y+A+ +VL+L A T TG+V+D GDG +H
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYIAVNSVLALAAGYTTSKCEMTGVVVDVGDGATHV 186
Query: 351 VPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +KE C
Sbjct: 187 VPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEMYC 241
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 130 bits (314), Expect = 5e-31
Identities = 60/146 (41%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +3
Query: 21 YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 197
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 198 PKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 377
+ REK ++MFE + PA+++A VL+ +A+GR T +V+D G G + P+++GY L
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVL 195
Query: 378 PHAILRLDLAGRDLTDYLMKILTERG 455
A++ L G LTD L+K L +G
Sbjct: 196 QKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 98.7 bits (235), Expect = 2e-21
Identities = 55/161 (34%), Positives = 89/161 (55%), Gaps = 10/161 (6%)
Frame = +3
Query: 63 LKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 242
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 243 FNSPAMYVA-IQAVLSLYASGR---------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 392
F ++Y+A Q+++ LY + R +V+D G +H VP+ + L HAI
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 393 RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
R+DL G+ T+YL ++++ R S E +V D KEKLC
Sbjct: 181 RIDLGGKAFTNYLKELVSYR--SINVMDETFLVDDAKEKLC 219
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 92.7 bits (220), Expect = 1e-19
Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 1/118 (0%)
Frame = +3
Query: 72 PIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 248
PIE G+I +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 249 SPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 422
Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 71.3 bits (167), Expect = 4e-13
Identities = 42/154 (27%), Positives = 77/154 (50%), Gaps = 6/154 (3%)
Frame = +3
Query: 72 PIEHGIITNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 248
P + ++ ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 249 SPAMYVAIQAVLS-----LYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGR 413
PA+ + A S L+ + GIVL G +H++P +G + R ++ G
Sbjct: 145 VPAVAFGVDAAFSYKYNQLHGICKKDGIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGY 204
Query: 414 DLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 515
+TDYL ++L+ + ++ E D+K + C
Sbjct: 205 HVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLEHC 238
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.7 bits (158), Expect = 4e-12
Identities = 29/72 (40%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 6 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLT 182
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 183 EAPLNPKANREK 218
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 55.6 bits (128), Expect = 2e-08
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Frame = +3
Query: 129 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 278
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 279 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 455
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 456 YSFTTTAEREIVRDIKEKLC 515
SF + VR +KEKLC
Sbjct: 301 ISFQSL---YTVRTLKEKLC 317
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 55.6 bits (128), Expect = 2e-08
Identities = 43/140 (30%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Frame = +3
Query: 129 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NSPAMYVAIQA 278
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 279 VLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH-AILRLDLAGRDLTDYLMKILTERG 455
VL+LYA+ RT+GIV++ G V +PI G + + + LT +L + + E
Sbjct: 241 VLALYAARRTSGIVVNIGFQVITILPILHGKVMRQVGVEVIGFGALKLTGFLKEKMQENN 300
Query: 456 YSFTTTAEREIVRDIKEKLC 515
SF + VR +KEKLC
Sbjct: 301 ISFQSL---YTVRTLKEKLC 317
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 165 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 344
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 238 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 296
Query: 345 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 440
V + +G +LP+ L G D+ L+ I
Sbjct: 297 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 328
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 35.5 bits (78), Expect = 0.021
Identities = 21/92 (22%), Positives = 47/92 (51%)
Frame = +3
Query: 165 HPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 344
H V++ + + +E +T ++ E + + A+ V + + +++ +G TT +++ G S
Sbjct: 250 HAVIVVPETFDTREIKEMLTIVLGELYFNSAV-VHQEGLSAVFGNGLTTACIVNIGAQTS 308
Query: 345 HTVPIYEGYALPHAILRLDLAGRDLTDYLMKI 440
V + +G +LP+ L G D+ L+ I
Sbjct: 309 TVVCVEDGVSLPNTEKILPFGGEDICRCLLWI 340
>At3g24130.1 68416.m03030 pectinesterase family protein contains
Pfam profile: PF01095 Pectinesterase
Length = 335
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 479 LSGGGERVTPLGEDLHEVVGQVATSQVQTEDGVGQSVTFVDGY 351
L G G+R+T + D H V Q T ++ V +S+TF + Y
Sbjct: 86 LVGAGKRLTRVEWDDHYSVAQSPTFSTLADNTVVKSITFANSY 128
>At2g19780.1 68415.m02311 leucine-rich repeat family protein /
extensin family protein contains leucine rich-repeat
(LRR) domains Pfam:PF00560, INTERPRO:IPR001611; similar
to leucine-rich repeat/extensin 1 (GI:13809918)
[Arabidopsis thaliana]; contains similarity to disease
resistance protein [Lycopersicon esculentum]
gi|3894383|gb|AAC78591
Length = 402
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -2
Query: 224 GHLLPVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPD 117
G+ + VG+G+ GG G+ GV +GG G P+
Sbjct: 28 GYSIGVGVGIGGGDGDDGGVWIGGGNPNSNPGSAPN 63
>At1g52570.1 68414.m05935 phospholipase D alpha 2 / PLD alpha 2
(PLDALPHA2) (PLD2) / choline phosphatase 2 identical to
phospholipase D alpha 2 ( PLD alpha 2) SP:Q9SSQ9 from
[Arabidopsis thaliana]
Length = 810
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = -2
Query: 236 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 111
+HDL GHLL P+G+ EG E G DT+ + GV D +
Sbjct: 760 EHDLPGHLLRYPIGIASEGNITELPGCEFFPDTKARILGVKSDYM 804
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 30 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 209
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 210 REK 218
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +3
Query: 30 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 209
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 210 REK 218
REK
Sbjct: 225 REK 227
>At5g04940.2 68418.m00523 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 347 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 463
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At5g04940.1 68418.m00522 SET domain-containing protein (SUVH1)
contains Pfam profiles PF00856: SET domain, PF05033:
Pre-SET motif, PF02182: YDG/SRA domain; identical to
cDNA SUVH1 (SUVH1) GI:13517742
Length = 670
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 347 HRTHLRRLRSAPRHPPSGLGWSRLDRLPHEDPHREGLLV 463
H T +L AP PP+ W+ + + P R+GL++
Sbjct: 348 HNTFKYKLVRAPGQPPAFASWTAIQKWKTGVPSRQGLIL 386
>At4g01900.1 68417.m00250 P II nitrogen sensing protein (GLB I)
identical to P II nitrogen sensing protein GLB I
(GI:7268574) [Arabidopsis thaliana]; similar to nitrogen
regulatory protein P-II (PII signal transducing protein)
(SP:O30794) {Nostoc punctiforme}
Length = 196
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = -3
Query: 367 PS*MGTVWETPSPESSTIPVVRPEAYSESTAWMATY-MAGELKVSNMIWVIFSLLALGLR 191
PS + V ++PS S +PVV + S+ Y + ++ + V +LL +G+R
Sbjct: 40 PSCLDLVTKSPSNNSRVLPVVSAQISSDYIPDSKFYKVEAIVRPWRIQQVSSALLKIGIR 99
Query: 190 GASVSST---GCSSGAT 149
G +VS G G+T
Sbjct: 100 GVTVSDVRGFGAQGGST 116
>At3g15730.1 68416.m01993 phospholipase D alpha 1 / PLD alpha 1
(PLDALPHA1) (PLD1) / choline phosphatase 1 identical to
SP:Q38882 Phospholipase D alpha 1 (EC 3.1.4.4)
(AtPLDalpha1) (PLD alpha 1) (Choline phosphatase 1)
(Phosphatidylcholine-hydrolyzing phospholipase D 1)
(PLDalpha) [Arabidopsis thaliana]
Length = 810
Score = 27.5 bits (58), Expect = 5.7
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = -2
Query: 236 KHDL-GHLL--PVGLGVEGGFGEQHGVLLGGDTQLIVEGVVPDLL 111
+HDL GHLL P+G+ EG E G DT+ + G D L
Sbjct: 760 EHDLPGHLLRYPIGVASEGDITELPGFEFFPDTKARILGTKSDYL 804
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/80 (22%), Positives = 32/80 (40%)
Frame = +3
Query: 96 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQ 275
NW +E + + + P LL EA + PK+ E Q +++TF + + +
Sbjct: 494 NWSYIEFVDNKDVLELIEKKPGGVIALLDEACMFPKSTHETFAQKLYQTFKNYKRFTKPK 553
Query: 276 AVLSLYASGRTTGIVLDSGD 335
+ +A G V D
Sbjct: 554 LSRTSFAISHYAGEVTYQAD 573
>At3g15400.1 68416.m01954 anther development protein, putative
similar to anther development protein ATA20 GB:AAC50042
GI:2708813 from [Arabidopsis thaliana]
Length = 416
Score = 27.1 bits (57), Expect = 7.5
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Frame = -2
Query: 476 SGGGERVTPLGEDLHEVVGQVATSQVQTEDG--VGQSVTFVDGYGVGDTISGVEHDTG-G 306
S GE P + + + Q S+++ ED + + + G G G SGV + G G
Sbjct: 166 SMSGESKHPEHKVKPDQIMQTMASELEEEDPDHTSKPMGYGVGRGYGSGGSGVGYGVGIG 225
Query: 305 TTGGVQRXXXXXXXXXXXXXXXLKHDLGHLLPVGLGVEGGFGEQHGVLLGGDTQL-IVEG 129
++GG + G G+G GG G G+ GG T + I EG
Sbjct: 226 SSGGSGFGEGIGSSGGNGFGEGIGSSGGSGFGEGIGSSGGSGFGEGIGSGGGTGIGIGEG 285
Query: 128 V 126
+
Sbjct: 286 I 286
>At2g39480.1 68415.m04845 ABC transporter family protein related to
multi drug resistance proteins and P-glycoproteins
Length = 1407
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +3
Query: 300 GRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKIL 443
G+T +V SG G S + + E Y P A L L GRDL Y ++ L
Sbjct: 1186 GQTVAVVGVSGSGKSTIISLIERYYDPVAGQVL-LDGRDLKSYNLRWL 1232
>At2g31900.1 68415.m03897 myosin family protein contains Pfam
profiles: PF00063 myosin head (motor domain), PF01843
DIL domain, PF00612 IQ calmodulin-binding motif, PF02736
myosin N-terminal SH3-like domain
Length = 1556
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 24/50 (48%)
Frame = +3
Query: 96 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 245
NW +E + + + + P LL EA + PK+ E Q M++T+
Sbjct: 480 NWSYVEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKMYQTY 529
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1
Query: 340 SPTPYPSTKVTLCPTPSS 393
SPTP PST PTPS+
Sbjct: 278 SPTPTPSTPTPSTPTPST 295
>At1g69670.1 68414.m08018 cullin, putative contains similarity to
Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from
[Homo sapiens]; contains Pfam profile PF00888: Cullin
family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 357 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 479
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERNLIVKLKTECGYQFTSKLE 462
>At1g26830.1 68414.m03270 cullin, putative similar to Cullin homolog
3 (CUL-3) SP:Q13618, GI:3639052 from [Homo sapiens];
contains Pfam profile PF00888: Cullin family
Length = 732
Score = 26.6 bits (56), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +3
Query: 357 IYEGYALPHAILRLDLAGRDLTD-----YLMKILTERGYSFTTTAE 479
++E Y H RL L+G+ ++D ++K+ TE GY FT+ E
Sbjct: 418 VFEKYYKQHLAKRL-LSGKTVSDDAERSLIVKLKTECGYQFTSKLE 462
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.317 0.124 0.422
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,466,190
Number of Sequences: 28952
Number of extensions: 207057
Number of successful extensions: 798
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
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