Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31596
         (473 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical pr...    38   0.003
Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical pr...    29   1.7  

>U64852-7|AAB04970.1|  452|Caenorhabditis elegans Hypothetical
           protein W01A11.1 protein.
          Length = 452

 Score = 38.3 bits (85), Expect = 0.003
 Identities = 12/31 (38%), Positives = 22/31 (70%)
 Frame = +2

Query: 368 YWAEEYXFXEREIFLNKYPQYVTNIQGLDIH 460
           YW  +Y + ++E  +N++PQ+ T I+GL +H
Sbjct: 99  YWLNKYDWRKQEATINQFPQFKTEIEGLQVH 129


>Z74029-6|CAM84812.1|  457|Caenorhabditis elegans Hypothetical
           protein C45B11.6 protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 383 YXFXEREIFLNKYPQYVTNIQGLDIH 460
           + + + + FLN + QY T I+GL IH
Sbjct: 98  FNWKQHQHFLNTFKQYKTEIEGLKIH 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,813,170
Number of Sequences: 27780
Number of extensions: 159614
Number of successful extensions: 289
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 289
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)