Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31595
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    26   0.23 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   1.6  
AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine 3-mon...    23   1.6  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    23   1.6  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.6  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    23   1.6  
EF532798-1|ABQ08060.1|   50|Tribolium castaneum acetylcholineste...    22   3.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.6  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    21   8.6  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = -2

Query: 413 WKLGPRGEPEPTSTCRSARTR 351
           WK  P+G P P+ST  S  T+
Sbjct: 67  WKKSPQGAPSPSSTPSSLPTQ 87


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  GFDRRRGWRQVCRTPQRLRNRHHYQG 138
           G D++  W + CR  ++L  R ++ G
Sbjct: 579 GLDQQNQWCKPCRPREQLTWRRNFHG 604


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 61  GFDRRRGWRQVCRTPQRLRNRHHYQG 138
           G D++  W + CR  ++L  R ++ G
Sbjct: 471 GLDQQNQWCKPCRPREQLTWRRNFHG 496


>AY052623-1|AAL15471.1|  101|Tribolium castaneum kynurenine
          3-monooxygenase protein.
          Length = 101

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 21 IALPNQGWSWTLSRF 65
          IALPN+  SWT++ F
Sbjct: 5  IALPNKDNSWTVTLF 19


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 21  IALPNQGWSWTLSRF 65
           IALPN+  SWT++ F
Sbjct: 223 IALPNKDNSWTVTLF 237


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 21  IALPNQGWSWTLSRF 65
           IALPN+  SWT++ F
Sbjct: 223 IALPNKDNSWTVTLF 237


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +3

Query: 21  IALPNQGWSWTLSRF 65
           IALPN+  SWT++ F
Sbjct: 223 IALPNKDNSWTVTLF 237


>EF532798-1|ABQ08060.1|   50|Tribolium castaneum
           acetylcholinesterase protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +1

Query: 103 PQRLRNRHH 129
           PQRLR RHH
Sbjct: 21  PQRLRIRHH 29


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 401 PRGEPEPTSTCRSARTRSA 345
           P  EP+PT T  S  T+++
Sbjct: 397 PTPEPQPTQTTESEPTQAS 415


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 82  NPVDDQNRLNVHDHPW 35
           NP+ D   ++V  HPW
Sbjct: 533 NPLTDTIPIHVWIHPW 548



 Score = 20.6 bits (41), Expect = 8.6
 Identities = 4/10 (40%), Positives = 7/10 (70%)
 Frame = +3

Query: 381 WFWLATWSQL 410
           W+W+  WS +
Sbjct: 629 WYWVMDWSDM 638


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 281 CPHQLQHDRPPSASRLRPTP 222
           C  QLQ  +  SASR   +P
Sbjct: 182 CRQQLQQQQNKSASRTTTSP 201


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,315
Number of Sequences: 336
Number of extensions: 2389
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)