Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31595
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase / 3-... 131 2e-31
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 123 8e-29
At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase, put... 120 6e-28
At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical t... 65 3e-11
At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependen... 63 1e-10
At1g12550.1 68414.m01455 oxidoreductase family protein similar t... 57 8e-09
At1g79870.1 68414.m09330 oxidoreductase family protein contains ... 56 1e-08
At1g72190.1 68414.m08347 oxidoreductase family protein similar t... 55 2e-08
At3g28790.1 68416.m03593 expressed protein 36 0.012
At2g45000.1 68415.m05603 expressed protein contains Pfam profile... 35 0.037
At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) simil... 32 0.26
At4g35240.1 68417.m05009 expressed protein contains Pfam domains... 30 1.1
At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family pr... 30 1.1
At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containi... 29 1.4
At1g49870.1 68414.m05591 expressed protein ; expression supporte... 29 1.9
At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box fami... 29 1.9
At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transfera... 29 1.9
At4g15300.1 68417.m02342 cytochrome P450 family protein similar ... 29 2.5
At1g78490.1 68414.m09149 cytochrome P450 family protein similar ... 29 2.5
At4g11420.1 68417.m01840 eukaryotic translation initiation facto... 28 3.2
At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 / ad... 28 4.3
At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger) fa... 28 4.3
At1g13530.1 68414.m01586 expressed protein ; expression support... 28 4.3
At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase f... 27 5.7
At5g11430.1 68418.m01335 transcription elongation factor-related... 27 5.7
At3g30290.1 68416.m03825 cytochrome P450 family protein similar ... 27 5.7
At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibit... 27 5.7
At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels ... 27 7.5
At1g06460.1 68414.m00684 31.2 kDa small heat shock family protei... 27 7.5
At5g08380.1 68418.m00987 alpha-galactosidase, putative / melibia... 27 9.9
At4g32120.1 68417.m04570 galactosyltransferase family protein co... 27 9.9
At4g31650.1 68417.m04495 transcriptional factor B3 family protei... 27 9.9
At3g24550.1 68416.m03083 protein kinase family protein contains ... 27 9.9
At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid t... 27 9.9
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 27 9.9
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 27 9.9
>At1g17745.1 68414.m02196 D-3-phosphoglycerate dehydrogenase /
3-PGDH identical to SP|O04130
Length = 624
Score = 131 bits (317), Expect = 2e-31
Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Frame = +2
Query: 62 VLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAGV 241
+L+ + +G LL +G + +S E+L ++ DAL+VRS T+VT+EV +A
Sbjct: 85 ILVTEKLGEAGVNLLREFGDVDCSY-DLSPEDLKKKVAESDALIVRSGTKVTREVFEAAK 143
Query: 242 -KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTA 418
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR+V A +
Sbjct: 144 GRLKVVGRAGVGIDNVDLQAATEHGCLVVNAPTANTVAAAEHGIALLASMARNVAQADAS 203
Query: 419 LKAGRWDRALYTGSELAGKTLAILGLGRVGRE 514
+KAG+W+R+ Y G L GKTLA++G G+VG E
Sbjct: 204 IKAGKWERSKYVGVSLVGKTLAVMGFGKVGTE 235
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 123 bits (296), Expect = 8e-29
Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 1/153 (0%)
Frame = +2
Query: 59 SVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQVTKEVLDAG 238
++L+ + +G +LL Y + +S EEL +I DAL+VRS T+V ++V ++
Sbjct: 48 TILVTEKLGQAGIDLLKKYANVDCSY-DLSLEELCTKISLCDALIVRSGTKVGRDVFESS 106
Query: 239 V-KLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPAST 415
+LKVVGRAG G+DN+D+ +A + G V+NAP AN ++A E L+ +AR++ A
Sbjct: 107 RGRLKVVGRAGVGIDNVDLAAATEYGCLVVNAPTANTVAAAEHGIALLTAMARNIAQADA 166
Query: 416 ALKAGRWDRALYTGSELAGKTLAILGLGRVGRE 514
++KAG+W R Y G L GKTLA+LG G+VG E
Sbjct: 167 SIKAGKWTRNKYVGVSLVGKTLAVLGFGKVGSE 199
>At4g34200.1 68417.m04854 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to phosphoglycerate
dehydrogenase, Arabidopsis thaliana, SP:O04130
Length = 603
Score = 120 bits (289), Expect = 6e-28
Identities = 61/125 (48%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Frame = +2
Query: 143 ISKEELLMEIPNHDALVVRSATQVTKEVLDAGV-KLKVVGRAGAGVDNIDVDSAGKKGVG 319
++ EEL ++I DAL+VRS T+V +EV ++ +LKVVGRAG G+DN+D+ +A + G
Sbjct: 90 MTPEELNIKISLCDALIVRSGTKVGREVFESSHGRLKVVGRAGVGIDNVDLSAATEFGCL 149
Query: 320 VINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLG 499
V+NAP AN ++A E LM +AR+V A ++KAG W R Y G L GKTLA+LG G
Sbjct: 150 VVNAPTANTIAAAEHGIALMAAMARNVAQADASVKAGEWKRNKYVGVSLVGKTLAVLGFG 209
Query: 500 RVGRE 514
+VG E
Sbjct: 210 KVGTE 214
>At5g14780.1 68418.m01734 formate dehydrogenase (FDH) identical to
GI:7677266
Length = 384
Score = 64.9 bits (151), Expect = 3e-11
Identities = 40/123 (32%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Frame = +2
Query: 155 ELLMEIPNHDALVVRS--ATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVIN 328
EL IP+ L+ VT E + LK++ AG G D+ID+ +A G+ V
Sbjct: 88 ELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAE 147
Query: 329 APGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LYTGSELAGKTLAILGLGR 502
G+N +S E +L+L R+ VP + G W+ A Y +L GKT+ +G GR
Sbjct: 148 VTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGR 207
Query: 503 VGR 511
+G+
Sbjct: 208 IGK 210
>At1g68010.1 68414.m07769 glycerate dehydrogenase / NADH-dependent
hydroxypyruvate reductase identical to hydroxypyruvate
reductase (HPR) GB:D85339 [Arabidopsis thaliana] (Plant
Cell Physiol 1997 Apr;38(4):449-55)
Length = 386
Score = 62.9 bits (146), Expect = 1e-10
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)
Frame = +2
Query: 248 KVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELTCTLMLVLARHVVPASTALKA 427
K G +N+DV++A K G+ V N PG + EL +L L AR +V A ++
Sbjct: 88 KAFSNMAVGYNNVDVEAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRG 147
Query: 428 G---RWDRALYTGSELAGKTLAILGLGRVG 508
G W L+ G+ L G+T+ ++G GR+G
Sbjct: 148 GLYEGWLPHLFVGNLLKGQTVGVIGAGRIG 177
>At1g12550.1 68414.m01455 oxidoreductase family protein similar to
glyoxylate reductase from Homo sapiens (gi:6002730);
contains Pfam D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain PF02826
Length = 323
Score = 56.8 bits (131), Expect = 8e-09
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 6/127 (4%)
Frame = +2
Query: 146 SKEELLMEIPNHD----ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKG 313
S E L P H A V+ VT E+L L+++ G+D+ID+ + ++G
Sbjct: 38 SSESLPSFFPRHASSARAFVISGRLPVTDELLSHLPSLQILVCTSVGIDHIDLAACKRRG 97
Query: 314 VGVINAPGANALSACELTCTLMLVLARHVVPASTALKAGRWDRA--LYTGSELAGKTLAI 487
+ + NA A + + L++ + R + A +++G W + GS+++GK + I
Sbjct: 98 IVITNAGNAFSDDVADCAVGLLISVLRRIPAADRYVRSGNWAKFGDFQLGSKVSGKRVGI 157
Query: 488 LGLGRVG 508
+GLG +G
Sbjct: 158 VGLGSIG 164
>At1g79870.1 68414.m09330 oxidoreductase family protein contains
Pfam profile: PF02826 D-isomer specific 2-hydroxyacid
dehydrogenase, NAD binding domain; similar to glyoxylate
reductase from Thermococcus litoralis [gi:13515409]
Length = 313
Score = 56.4 bits (130), Expect = 1e-08
Identities = 28/109 (25%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Frame = +2
Query: 185 ALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGANALSACEL 364
A+V ++ +++ L++V G+D ID+ +KG+ V N P +L
Sbjct: 48 AVVGNASAGADAQLISDLPNLEIVSSFSVGLDKIDLGKCKEKGIRVTNTPDVLTEDVADL 107
Query: 365 TCTLMLVLARHVVPASTALKAGRWDRALY-TGSELAGKTLAILGLGRVG 508
L+L L R + +++G+W + + ++ +GK++ I+GLGR+G
Sbjct: 108 AIGLILALLRRLCECDRYVRSGKWKQGEFQLTTKFSGKSVGIIGLGRIG 156
>At1g72190.1 68414.m08347 oxidoreductase family protein similar to
D-3-phosphoglycerate dehydrogenase from Arabidopsis
thaliana [SP|O04130], glyoxylate reductase from Homo
sapiens (gi:6002730); contains Pfam D-isomer specific
2-hydroxyacid dehydrogenase, NAD binding domain PF02826
Length = 373
Score = 55.2 bits (127), Expect = 2e-08
Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +2
Query: 167 EIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPG--- 337
E+ + + V Q+ V+ +K++ + G G+D +D+D+A K G+ V P
Sbjct: 90 EVIKNYHICVAMTMQMDSNVISRASNIKLIMQYGVGLDGVDIDAATKHGIKVARIPSEGT 149
Query: 338 ANALSACELTCTLMLVLARHVVPASTALKAGRWDRALYTGSELAGKTLAILGLGRVGRE 514
NA S E+ LML L + +L+ TG L GKT+ ILG G +G E
Sbjct: 150 GNAASCSEMAIYLMLGLLKKQNEMQISLRNRLLGEP--TGDTLLGKTVFILGYGNIGIE 206
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 36.3 bits (80), Expect = 0.012
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -1
Query: 348 SALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 229
S +P TPTP P ST STP P+ PT + TP++
Sbjct: 271 SGASPSGSPTPTPSTPTPSTPTPSTPTPSTPTPSTPTPST 310
Score = 33.9 bits (74), Expect = 0.065
Identities = 24/80 (30%), Positives = 35/80 (43%)
Frame = -1
Query: 420 SAVEAGTTWRARTNINVQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSF 241
S +G T++ T + S P TPTP P ST STP P+ PT
Sbjct: 255 SGGSSGNTYKDTTGSSSGASPSGSPTPTPS---TPTPSTPTPSTPTPSTPTPSTPT--PS 309
Query: 240 TPASNTSLVT*VAERTTRAS 181
TPA +T +E+ + ++
Sbjct: 310 TPAPSTPAAGKTSEKGSESA 329
>At2g45000.1 68415.m05603 expressed protein contains Pfam profile:
PF05064 Nsp1-like C-terminal region
Length = 739
Score = 34.7 bits (76), Expect = 0.037
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = -1
Query: 498 PRPRMARVLPASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALIT 319
P +A P SS ++ A P+FS + + + +I S + A T
Sbjct: 232 PSFSVASSAPGSSSSIFGATGSSPSFSVASSASG--SSPSIFGATGSSPFFGSSSSAGST 289
Query: 318 PTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 220
P+ F + S + S+P+P +TF+ + SNTS
Sbjct: 290 PSLFASSSSGATTSSPSPFGVSTFNSSSTSNTS 322
>At1g65960.1 68414.m07484 glutamate decarboxylase 2 (GAD 2) similar
to glutamate decarboxylase (gad) GI:294111 from [Petunia
hybrida]
Length = 494
Score = 31.9 bits (69), Expect = 0.26
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +2
Query: 26 TTKPRMVVDIKSVLI-VDGVGAKCAELLNAYGIATTTKAKISKEELLMEI 172
T R+V DI VL +D + +K ++ + GIA K K ++E+LME+
Sbjct: 427 TLAERLVADISKVLHELDTLPSKISKKMGIEGIAENVKEKKMEKEILMEV 476
>At4g35240.1 68417.m05009 expressed protein contains Pfam domains,
PF04782: Protein of unknown function (DUF632) and
PF04783: Protein of unknown function (DUF630)
Length = 828
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -3
Query: 502 PAKAKDGEGLASELAASVQSPVPPASLQRSGSWD 401
P G AS AA+ + P PP S RS WD
Sbjct: 246 PGPGYYGSSSASTTAAATKPPPPPPSPPRSNGWD 279
>At1g23180.1 68414.m02896 armadillo/beta-catenin repeat family
protein contains Pfam profile: PF00514
armadillo/beta-catenin-like repeat
Length = 834
Score = 29.9 bits (64), Expect = 1.1
Identities = 22/80 (27%), Positives = 38/80 (47%)
Frame = +2
Query: 164 MEIPNHDALVVRSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVINAPGAN 343
ME ++ V S KEVLDA V ++V A N+ ++ G+I+ P +
Sbjct: 544 MESKFYEGPVNGSKADSRKEVLDAAVFSRLVQIAKTASPNLLRNAISVIEFGIISNPNMD 603
Query: 344 ALSACELTCTLMLVLARHVV 403
+ + ++T L L L + V+
Sbjct: 604 TIISKDITTVLDLALRQKVL 623
>At1g15290.1 68414.m01830 tetratricopeptide repeat (TPR)-containing
protein ESTs gb|F20110 and gb|F20109 come from this gene;
contains Pfam profile PF00515: TPR Domain
Length = 1558
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 61 GFDRRRGWRQVCRTPQR-LRNRHHYQGQDLQGRTSYGDTQPRRSGCAFSNSS 213
G R+ RQ +R L N+HH + QD+Q + Y Q G + S SS
Sbjct: 1165 GAGRKSRQRQPDLMKKRMLLNKHHNRNQDVQQQNIYSPLQKTSKGPSLSKSS 1216
>At1g49870.1 68414.m05591 expressed protein ; expression supported
by MPSS
Length = 828
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Frame = +2
Query: 44 VVDIKSVLI---VDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVVRSATQV 214
+ D++S+L+ V G+ + E + G K +++ L E+P+ D+ +V+ +++
Sbjct: 480 IPDLESLLVKKHVSGLEKEVQETIKNCGKMYENVKKPGRKDGLSEVPSLDSCLVKHFSKL 539
Query: 215 TKEVLDAGVKLK 250
KEV +A + K
Sbjct: 540 EKEVQEAKKRSK 551
>At1g30950.1 68414.m03790 unusual floral organ (UFO) / F-box family
protein (FBX1) E3 ubiquitin ligase SCF complex F-box
subunit; almost identical to unusual floral organs
(UFO)GI:4376159 from [Arabidopsis thaliana]
Landsberg-erecta; one amino acid difference
Length = 442
Score = 29.1 bits (62), Expect = 1.9
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = -1
Query: 297 ESTSMLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWL 175
+ST ++ P+ P +++FT +SN+S T ++ W+
Sbjct: 2 DSTVFINNPSLTLPFSYTFTSSSNSSTTTSTTTDSSSGQWM 42
>At1g01390.1 68414.m00054 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 480
Score = 29.1 bits (62), Expect = 1.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 339 APGALITPTPFLPAESTSMLSTPAPARPTTFSFTPASNTS 220
A G L+ L + + L PAP +PT + P NTS
Sbjct: 207 AKGILVNSFVDLESNAIKALQEPAPDKPTVYPIGPLVNTS 246
>At4g15300.1 68417.m02342 cytochrome P450 family protein similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450
Length = 487
Score = 28.7 bits (61), Expect = 2.5
Identities = 11/34 (32%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +1
Query: 424 GWQ-VGPGSVHWQRARWQDPR--HPWPWQGRPRG 516
GW +G +H+ +++DP +PW W+G+ G
Sbjct: 383 GWTFMGYPHIHFNSEKYEDPYAFNPWRWEGKDLG 416
>At1g78490.1 68414.m09149 cytochrome P450 family protein similar to
Cytochrome P450 90A1 (SP:Q42569) [Arabidopsis thaliana]
Length = 479
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = +1
Query: 424 GW--QVGPGSVHWQRARWQDP--RHPWPWQGR 507
GW V P +VH+ A +++P +PW W+G+
Sbjct: 376 GWIVAVAPSAVHFDPAIYENPFEFNPWRWEGK 407
>At4g11420.1 68417.m01840 eukaryotic translation initiation factor 3
subunit 10 / eIF-3 theta / eIF3a (TIF3A1) identical to
eukaryotic translation initiation factor 3 subunit 10
(eIF-3 theta) (Eukaryotic translation initiation factor 3
large subunit) (eIF3a) (p114). [Arabidopsis thaliana]
SWISS-PROT:Q9LD55
Length = 987
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 6/60 (10%)
Frame = -2
Query: 512 RGRPCQGQGW---RGSCQ---RARCQCTEPGPTCQPSAQWKLGPRGEPEPTSTCRSARTR 351
RG P W RG+ Q R GP + +W GPRG + ST S+R R
Sbjct: 924 RGPPPGDDHWGSNRGAAQNTDRWTSNRERSGPPAEGGDRWGSGPRGSDDRRSTFGSSRPR 983
>At3g19160.1 68416.m02433 adenylate isopentenyltransferase 8 /
adenylate dimethylallyltransferase / cytokinin synthase
(IPT8) identical to adenylate isopentenyltransferase
(IPT8) [Arabidopsis thaliana] GI:14279068
Length = 330
Score = 27.9 bits (59), Expect = 4.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 197 RSATQVTKEVLDAGVKLKVV---GRAGAGVDNIDVDSAGKKGVGVINAPGANALSACELT 367
RS +T ++ K KVV G G+G + +D A + ++N+ ++T
Sbjct: 27 RSVVPMTTVCMEQSYKQKVVVIMGATGSGKSCLSIDLATRFSGEIVNSDKIQFYDGLKVT 86
Query: 368 CTLMLVLARHVVP 406
M +L R VP
Sbjct: 87 TNQMSILERCGVP 99
>At2g38970.1 68415.m04789 zinc finger (C3HC4-type RING finger)
family protein very low similarity to SP|P97280
Inter-alpha-trypsin inhibitor heavy chain H3 precursor
{Mesocricetus auratus}; contains Pfam profiles PF00097:
Zinc finger, C3HC4 type (RING finger), PF00092: von
Willebrand factor type A domain
Length = 692
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 2 ASRLNNDSTTKPRMVVDIKSVLIVDG--VGAKCAELLNAYG 118
A+ LNN + PR VD+ +VL + G G K A L A G
Sbjct: 237 ANSLNNQISRYPRAPVDLVTVLDISGSMAGTKLALLKRAMG 277
>At1g13530.1 68414.m01586 expressed protein ; expression supported
by MPSS
Length = 385
Score = 27.9 bits (59), Expect = 4.3
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 409 FHCAEGWQVGPGSVHWQRARWQDPRHPWPWQG 504
F +E ++G GSV +R +W++ R W +G
Sbjct: 296 FGVSETQKIGIGSVVLERMKWEEERFGWSKKG 327
>At5g65450.1 68418.m08231 ubiquitin carboxyl-terminal hydrolase
family protein / zinc finger (MYND type) family protein
similar to ubiquitin-specific protease 16 (UBP16)
[Arabidopsis thaliana] GI:11993477; contains Pfam
profiles PF00443: Ubiquitin carboxyl-terminal hydrolase,
PF01753: MYND finger
Length = 731
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 73 RRGWRQVCRTPQRLRNRHHYQGQDLQGRTSYGDTQPRRSGCAFSNSSD 216
RRG ++ CR+P + Y D + S D R G A+ +SS+
Sbjct: 87 RRGHKEECRSPDYDEEKEEYVQSDYDAKESNVDFPSR--GTAYESSSN 132
>At5g11430.1 68418.m01335 transcription elongation factor-related
contains weak similarity to transcription elongation
factors
Length = 871
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 3/104 (2%)
Frame = -1
Query: 456 PVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPG-ALITPTPFLPA--ESTS 286
PV + H+P + +A +N V S +LA AL+ P E+
Sbjct: 84 PVVNKKQHVPP-----PQRSVKAMEEVNESVRSKMRESLASALALVKKDDDSPKGKENIG 138
Query: 285 MLSTPAPARPTTFSFTPASNTSLVT*VAERTTRASWLGISIRSS 154
+ TP + T SF PAS S+ V E T S + S+ SS
Sbjct: 139 TVETPVITQENTQSFQPASPASISVPVGEGT--MSEMPTSVESS 180
>At3g30290.1 68416.m03825 cytochrome P450 family protein similar to
Cytochrome P450 85 (SP:Q43147) {Lycopersicon
esculentum}; similar to GB:C71417 from [Arabidopsis
thaliana] (Nature 391 (6666), 485-488 (1998))
Length = 408
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/30 (36%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = +1
Query: 424 GWQ-VGPGSVHWQRARWQDPR--HPWPWQG 504
GW +G S H+ +++DP +PW W+G
Sbjct: 301 GWNFMGYPSAHFDPTKYEDPLEFNPWRWKG 330
>At1g62760.1 68414.m07083 invertase/pectin methylesterase inhibitor
family protein low similarity to extensin [Volvox
carteri] GI:21992
Length = 312
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = -1
Query: 363 SSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 229
SS LS+L+P ++P+P + S++ S+ +P+ P S +P+S
Sbjct: 74 SSSPLSSLSPS--LSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 116
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/48 (27%), Positives = 27/48 (56%)
Frame = -1
Query: 372 VQVSSHALSALAPGALITPTPFLPAESTSMLSTPAPARPTTFSFTPAS 229
+ SS +LS + ++P+P + S++ S+ +P+ P S +P+S
Sbjct: 20 ITTSSSSLSPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSS 67
>At4g40090.1 68417.m05675 arabinogalactan-protein (AGP3) InDels
between the genome sequence and the cDNA prevent
identical translations from being annotated; the basis
for this is under investigation.
Length = 87
Score = 27.1 bits (57), Expect = 7.5
Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -1
Query: 354 ALSALAPGALITPTPFLP-AESTSMLSTPAPARPTTFSFTPASN 226
A S LA P FLP ES S + TP A P FTP S+
Sbjct: 16 AASCLAQAPAPAPITFLPPVESPSPVVTPT-AEPPARCFTPYSS 58
>At1g06460.1 68414.m00684 31.2 kDa small heat shock family protein /
hsp20 family protein contains Pfam profile: PF00011
Hsp20/alpha crystallin family
Length = 285
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -1
Query: 471 PASSLPVYRARSHLPAFSAVEAGTTWRARTNINVQVSSHALSALAPGALI 322
P+ S + + R L GT W R+N+ S+ ++ PGA I
Sbjct: 159 PSLSPNLQKERPKLDLPKLANLGTVWSPRSNVAESTHSYVVAIELPGASI 208
>At5g08380.1 68418.m00987 alpha-galactosidase, putative / melibiase,
putative / alpha-D-galactoside galactohydrolase,
putative similar to alpha-galactosidase SP:Q42656 from
[Coffea arabica]; contains Pfam profile PF02065:
Melibiase
Length = 410
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = -1
Query: 513 SRPTLPRPRMARVLPASSLPVYRARSHL----PAFSAVEAGTTWRARTNI 376
S+PT+ P M R L S P++ + PA G +WR +I
Sbjct: 182 SKPTVRYPVMTRALMKSGRPIFHSLCEWGDMHPALWGSPVGNSWRTTNDI 231
>At4g32120.1 68417.m04570 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 345
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/103 (22%), Positives = 45/103 (43%)
Frame = +2
Query: 17 NDSTTKPRMVVDIKSVLIVDGVGAKCAELLNAYGIATTTKAKISKEELLMEIPNHDALVV 196
+ +T+KP +++ S L V + + Y A T K++ ++ + D LVV
Sbjct: 21 SQNTSKPSLILAFFSCLAWLYVAGRLWQDAQ-YRAALNTVLKMNYDQRPKVLTVEDKLVV 79
Query: 197 RSATQVTKEVLDAGVKLKVVGRAGAGVDNIDVDSAGKKGVGVI 325
+ + +++ ++L G V S+GKK + VI
Sbjct: 80 LGCKDLERRIVETEMELAQAKSQGYLKKQKSVSSSGKKMLAVI 122
>At4g31650.1 68417.m04495 transcriptional factor B3 family protein
low similarity to reproductive meristem gene 1 from
[Brassica oleracea var. botrytis] GI:3170424,
[Arabidopsis thaliana] GI:13604227; contains Pfam
profile PF02362: B3 DNA binding domain
Length = 493
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 255 SVVLELVWTTSTSTPPVKRASE*ST 329
SVVLELVW +T+ P K S+ T
Sbjct: 469 SVVLELVWEETTTLPMFKFCSKIKT 493
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -1
Query: 336 PGALITPTPFLPAESTSMLSTPAPARPTT 250
PG+L TP LP S S TP+P PTT
Sbjct: 70 PGSL---TPPLPQPSPSAPITPSPPSPTT 95
>At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein contains Pfam
protease inhibitor/seed storage/LTP family domain
PF00234
Length = 149
Score = 26.6 bits (56), Expect = 9.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2
Query: 458 CQCTEPGPTCQPSAQWKLGPRGEPEPT 378
C C P P +PS K P +P+PT
Sbjct: 29 CGCPSPKPKHKPSPSPKPKPNPKPKPT 55
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 401 VPASTALKAGRWDRALYTGSELAGKTL 481
V ++AL +WD+ YTGS G+ +
Sbjct: 178 VTETSALLEQKWDKIFYTGSSKIGRVI 204
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +2
Query: 401 VPASTALKAGRWDRALYTGSELAGKTL 481
V ++AL +WD+ YTGS G+ +
Sbjct: 178 VTETSALLEQKWDKIFYTGSSKIGRVI 204
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,229,410
Number of Sequences: 28952
Number of extensions: 221448
Number of successful extensions: 961
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 943
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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