Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31593
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_57454| Best HMM Match : DUF924 (HMM E-Value=1) 29 1.7
SB_16071| Best HMM Match : DUF939 (HMM E-Value=1.2) 29 3.0
SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 28 5.3
SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8) 28 5.3
SB_43838| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24) 27 6.9
SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034) 27 6.9
SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034) 27 6.9
SB_46280| Best HMM Match : 7tm_1 (HMM E-Value=3.89981e-42) 27 9.2
SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9) 27 9.2
SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_8645| Best HMM Match : 7tm_1 (HMM E-Value=0) 27 9.2
>SB_55282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1565
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = +2
Query: 17 LCEVGDGVDRIQREALKRVTASNPLVSCQEIPRWNLAAWKES 142
+C+ G+ +QR+A + ++S+ V+C I +L WK++
Sbjct: 1200 MCDNLPGIVSVQRDAFRAPSSSDLRVACARISGIDLTKWKDN 1241
>SB_57454| Best HMM Match : DUF924 (HMM E-Value=1)
Length = 144
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +2
Query: 23 EVGDGVDRIQREALKRVTASNPLVSCQEIPRWNLAAWKES 142
EVGDG + A + + + LVSC+ P+ +A W++S
Sbjct: 9 EVGDGTTSVTVLASELLKEAEKLVSCKIHPQTIVAGWRKS 48
>SB_16071| Best HMM Match : DUF939 (HMM E-Value=1.2)
Length = 545
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +3
Query: 342 LRMCLARLTFLSNIFYSIIPTAIPFNYLILMKYESRVFLKE 464
LRM L+R FLS + + I +P N L+ ++ ++ +++E
Sbjct: 423 LRMYLSRFRFLSRVLEAFILAQLPSNLLLRLEPKAPGYVRE 463
>SB_48451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2851
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 117 HLGISWQLTNGFEAVTLFSASRWILSTPSPTSQRKP 10
HL + Q+TN ++ T R S PSP SQ+ P
Sbjct: 2129 HLQPAQQVTNTYQMATQMPQVRQPTSAPSPLSQQTP 2164
>SB_8111| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 531
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +2
Query: 23 EVGDGVDRIQREALKRVTASNPLVSCQEIPRWNLAAWKES 142
EVGDG + + + + LVSC+ P+ +A W++S
Sbjct: 91 EVGDGTTSVTVLTSELLKEAEKLVSCKIHPQTIVAGWRKS 130
>SB_27138| Best HMM Match : Ebp2 (HMM E-Value=1.8)
Length = 841
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 124 EIPSRDFLAADQWIRSSHSFQCLPLDSIYTVTNFAKEACN 5
E+ S D D+W R H + P D + +TN N
Sbjct: 453 ELESGDEGECDEWSRELHEVELAPFDRVVGLTNILPAEAN 492
>SB_43838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 335 TNVKNVFSATYVLVKYILFYHTYRY 409
T VK F+AT ++ + + FY YRY
Sbjct: 18 TGVKTFFAATDLVQENLTFYQAYRY 42
>SB_25482| Best HMM Match : PP2C (HMM E-Value=2.4e-24)
Length = 316
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 8 AGFLCEVGDGVDRIQREALKRVTASN 85
AG + DG++RIQ+ AL+ + ASN
Sbjct: 266 AGLPAFLSDGLERIQKRALRIIFASN 291
>SB_22316| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 3404
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 138 NQSEINDFKAVTKKPTNNTFV 200
N+S+I F+ K TNNTFV
Sbjct: 561 NESQIKGFRFAVKDATNNTFV 581
>SB_1398| Best HMM Match : fn3 (HMM E-Value=0.0034)
Length = 2245
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 138 NQSEINDFKAVTKKPTNNTFV 200
N+S+I F+ K TNNTFV
Sbjct: 1555 NESQIKGFRFAVKDATNNTFV 1575
>SB_46280| Best HMM Match : 7tm_1 (HMM E-Value=3.89981e-42)
Length = 504
Score = 27.1 bits (57), Expect = 9.2
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Frame = -2
Query: 305 LSILVVLSDFLSW*FPERLSLQKTMIYSDLVNL*SYERV--VCWFFSYSFKIINLTLILS 132
++++ V S F+ FP ++ L Y D + + RV +CW F+Y+ ++N +
Sbjct: 263 MTVVAVFSVFM---FPNQV-LWLWADYGDGLKQPHFRRVSVICWLFTYTNGVVNPIIFAI 318
Query: 131 KQRDSISGF 105
++ SGF
Sbjct: 319 FSKEFRSGF 327
>SB_43915| Best HMM Match : Bombesin (HMM E-Value=4.9)
Length = 485
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = -3
Query: 124 EIPSRDFLAADQWIRSSHSFQCLPLDSIYTVTNFAKEACN 5
E+ S D +D+W R H + P D + TN N
Sbjct: 240 ELESGDEGESDEWSRELHEVELAPFDRVVGPTNILPAEAN 279
>SB_32568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1918
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 75 LLRIHWSAAKKSRDGISLLGKNQSEINDFKAVTKKPTNNT 194
++ +HW A + RDG+S K S+++ K VT P N+
Sbjct: 1827 MMTVHWPACLEERDGLS---KTDSDLD--KQVTGTPLANS 1861
>SB_8645| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 432
Score = 27.1 bits (57), Expect = 9.2
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = -2
Query: 311 TILSILVVLSDFLSW*FPERLSLQKTMIYSDLVNL*SYER--VVCWFFSYSFKIINLTLI 138
T + I+++ F+ FP + +T + + + ++ + ++CW F+Y+ + N +
Sbjct: 288 TFIGIVIIFMCFM---FPNQFIWMQTDLGNGARDEKAFSKAVIICWLFTYTNSVANPIIF 344
Query: 137 LSKQRDSISGF 105
D SGF
Sbjct: 345 AIFNNDFRSGF 355
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,682,941
Number of Sequences: 59808
Number of extensions: 265806
Number of successful extensions: 547
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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