Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31593
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80452-2|AAK68180.1|  729|Caenorhabditis elegans Hypothetical pr...    35   0.040
Z66520-1|CAA91388.1|  655|Caenorhabditis elegans Hypothetical pr...    33   0.12 
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (...    33   0.12 
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr...    31   0.49 
Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical p...    27   6.0  
U55365-6|AAN84868.1|  338|Caenorhabditis elegans Nuclear hormone...    27   8.0  
AY204182-1|AAO39186.1|  338|Caenorhabditis elegans nuclear recep...    27   8.0  
AF273838-1|AAG15185.1|  273|Caenorhabditis elegans nuclear recep...    27   8.0  

>U80452-2|AAK68180.1|  729|Caenorhabditis elegans Hypothetical
           protein C16C8.2 protein.
          Length = 729

 Score = 34.7 bits (76), Expect = 0.040
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
 Frame = +2

Query: 2   TVAGFLCEVGDGVDRIQREALK--RVTASNPLVSCQEIPRWNLAAWKE 139
           T++  LC+ G+    + R+A    + TA N LV C EIP  +  AWKE
Sbjct: 679 TMSRVLCDAGEHFPMVPRKAFSVFKPTAHN-LVKCDEIPDLDYNAWKE 725


>Z66520-1|CAA91388.1|  655|Caenorhabditis elegans Hypothetical
           protein F49E12.1 protein.
          Length = 655

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +2

Query: 2   TVAGFLCEVGDGVDRIQREALKRVTASNPLVSCQEIPRWNLAAWKE 139
           T++  LC+ GD + R+ R A   +   +  V C  I   NL AW+E
Sbjct: 611 TLSWVLCQTGDNMVRVGRRAFD-IENGSRAVPCSSITGLNLEAWRE 655


>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
            (drosophila peroxidase)homolog protein 1 protein.
          Length = 1285

 Score = 33.1 bits (72), Expect = 0.12
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 2    TVAGFLCEVGDGVDRIQREALKRVTASNP-LVSCQEIPRWNLAAWKE 139
            T+A   C+ GD +DRIQ++             +CQE    NL AW +
Sbjct: 1168 TLARLFCDNGDNIDRIQKDVFMYPGMDKENYGTCQETEMMNLRAWSK 1214


>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2    TVAGFLCEVGDGVDRIQREALKRVTASNPLVS-CQEIPRWNLAAW 133
            T++  +C  GD +DRIQR+       S      C+ +P  NL  W
Sbjct: 1203 TLSKIICTNGDDIDRIQRDIFVYHGNSTQFYEPCESLPEINLNMW 1247


>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
            K09C8.5 protein.
          Length = 1328

 Score = 31.1 bits (67), Expect = 0.49
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +2

Query: 2    TVAGFLCEVGDGVDRIQREALKRVTASNPLVS-CQEIPRWNLAAW 133
            T++  +C  GD +DRIQR+       S      C+ +P  NL  W
Sbjct: 1203 TLSKIICTNGDDIDRIQRDIFVYHGNSTQFYEPCESLPEINLNMW 1247


>Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical
           protein T26E4.12 protein.
          Length = 320

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +3

Query: 369 FLSNIFYSIIPTAIPFNYLILMKYESRVFLKEKK 470
           +L ++F+   P   PF+Y++ + +   V L  KK
Sbjct: 257 YLVSVFFMFSPICSPFSYILFVPHYLNVILGNKK 290


>U55365-6|AAN84868.1|  338|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 94, isoform a protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 438 YESRVFLKEKKGHTHLFFTP 497
           +ES +F  EKK   H FF P
Sbjct: 171 FESAIFAVEKKSDVHTFFAP 190


>AY204182-1|AAO39186.1|  338|Caenorhabditis elegans nuclear receptor
           NHR-94 protein.
          Length = 338

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 438 YESRVFLKEKKGHTHLFFTP 497
           +ES +F  EKK   H FF P
Sbjct: 171 FESAIFAVEKKSDVHTFFAP 190


>AF273838-1|AAG15185.1|  273|Caenorhabditis elegans nuclear receptor
           NHR-94 protein.
          Length = 273

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 438 YESRVFLKEKKGHTHLFFTP 497
           +ES +F  EKK   H FF P
Sbjct: 106 FESAIFAVEKKSDVHTFFAP 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,339,319
Number of Sequences: 27780
Number of extensions: 217368
Number of successful extensions: 575
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)