Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31590
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0628 + 21357876-21359921 30 1.3
12_02_0280 - 16729000-16729678,16729948-16730039,16730072-167307... 29 2.2
02_05_0942 + 32970537-32970581,32971059-32971113,32971300-329714... 29 2.2
08_02_1277 + 25823835-25825113,25825201-25825418,25825501-258257... 29 2.9
11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502 28 3.9
10_07_0152 + 13439178-13439517,13440072-13440229,13440431-134404... 28 3.9
11_06_0636 - 25711965-25712232,25712438-25712502,25713033-257132... 28 5.1
07_03_1391 + 26234647-26235026,26235112-26235226,26235345-262354... 27 6.8
02_05_0895 - 32593155-32593190,32594228-32594279,32594544-325945... 27 6.8
01_01_0278 - 2281536-2281977,2282523-2282926 27 6.8
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270... 27 8.9
04_04_0430 - 25153572-25154060 27 8.9
>12_02_0628 + 21357876-21359921
Length = 681
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +1
Query: 316 LPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEM 492
L T KY+ +A+ A+WQM Q V D + K+ + + + V +P R ++
Sbjct: 362 LEGYTTCKYLNVVWDNEANAARWQMTQ-VSDSFPSEEEFKKWLQVAEKNGVRVPTRQDV 419
>12_02_0280 -
16729000-16729678,16729948-16730039,16730072-16730772,
16731033-16731144,16731961-16731970,16732954-16733663
Length = 767
Score = 29.1 bits (62), Expect = 2.2
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Frame = -2
Query: 509 SELKPFISYRT-GMGTESPFKVFLYLTHIVYLFSLSPTGCTIC---HLAV-SASCIVSVP 345
S+++ FI++ G T+ P F +L + + ++PT + + V +AS P
Sbjct: 468 SQVRSFITFPVRGCSTQPPISKFEHLRVLKLVAYVAPTLLDLSADQRVPVDNASENWETP 527
Query: 344 IY--LKSVMSGSTDWMSWS*SCVELTCRHVS 258
++ +S M DW + S +EL CRHVS
Sbjct: 528 VFEDARSTMQPFGDWNDVT-SLIELRCRHVS 557
>02_05_0942 +
32970537-32970581,32971059-32971113,32971300-32971417,
32971567-32971615,32971637-32971723,32971890-32971970,
32972074-32972181,32972432-32972503,32973218-32973250
Length = 215
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/52 (23%), Positives = 27/52 (51%)
Frame = +1
Query: 85 YAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTT 240
+ E P +Y++K+ +ID + + ++ A++ PY + ++ VTT
Sbjct: 162 FVESSLPVIEYYNAKDKVKKIDAAKPIPEVFEDVKAIFAPYAPNALLSGVTT 213
>08_02_1277 +
25823835-25825113,25825201-25825418,25825501-25825724,
25826468-25827080,25827735-25827775,25830549-25831191,
25832595-25834012,25834110-25834251,25834415-25834522,
25835346-25835558,25835643-25835753,25836099-25836293,
25836555-25836695,25836835-25836909
Length = 1806
Score = 28.7 bits (61), Expect = 2.9
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +3
Query: 153 LWRYGQDLPVHVSGLPTLRYFYKDRAGHNGNRDEQGDVPASQFDARSAPR 302
L+ + + L V LR Y+ R H N+D +GD P+S R+A R
Sbjct: 487 LYTWEKKLYKEVKAGERLRIDYEKRLNHLRNQDVKGDEPSSVDKTRAALR 536
>11_06_0551 + 24903208-24903399,24903513-24904661,24904686-24907502
Length = 1385
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +1
Query: 184 TSAVYPPYGTSIKIAPVTTETEMNKETCLQVNSTQDQLQDIQ 309
T+A P GTS +A TT T +K+ ++ +LQD+Q
Sbjct: 412 TTAPSPGVGTSHDVATATTTTTFDKDQIEEMIYIHMELQDMQ 453
>10_07_0152 +
13439178-13439517,13440072-13440229,13440431-13440477,
13441115-13441178,13441600-13442237,13442328-13442562
Length = 493
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 22 DKGSPPQWSPVYTVKGLLNIPYAELHEP 105
D GS +W P+ G +N P LH P
Sbjct: 391 DSGSTSEWRPLIKKYGYVNCPTVRLHIP 418
>11_06_0636 -
25711965-25712232,25712438-25712502,25713033-25713296,
25713405-25713854
Length = 348
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +1
Query: 214 SIKIAPVTTETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQMV 393
++KIA V + N+ CL+++ D+ + + +L +++ Y T + A A W M+
Sbjct: 17 AMKIATVAKKARQNQTKCLELS---DRARRVAGIL---SNYNYKPAATGEAAAAATWDML 70
Query: 394 QPVGDKLNK 420
+ + L++
Sbjct: 71 GSLNEALDE 79
>07_03_1391 +
26234647-26235026,26235112-26235226,26235345-26235410,
26235519-26235607,26235717-26235807,26235917-26236063,
26236160-26236252,26236373-26236474,26236581-26237255
Length = 585
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 222 DRAGHNGNRDEQGDVPASQFDARSAPRHPI 311
+ G + +R E+GD P+S + S PR I
Sbjct: 453 EEGGEDHHRQEEGDEPSSPSSSSSVPREKI 482
>02_05_0895 -
32593155-32593190,32594228-32594279,32594544-32594584,
32594795-32594906,32595195-32595268,32595349-32595587,
32595710-32596678,32596725-32596878,32596957-32597244,
32597393-32597534,32598679-32598752,32598870-32598890
Length = 733
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +1
Query: 70 LLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVT 237
+L + L PF+ W ++ SR+ Y G M+ + F A + S+KI T
Sbjct: 426 MLKATASRLFGPFFDWIETWEMISRLKYLGTMLFLHNFQQA----FTWSLKIVTAT 477
>01_01_0278 - 2281536-2281977,2282523-2282926
Length = 281
Score = 27.5 bits (58), Expect = 6.8
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = +1
Query: 274 VNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLNKY 423
+N +D D+Q + M F G A T +W VGD N Y
Sbjct: 54 MNHFRDLELDVQQIENGMVPFPVYGAAAAGGAFTLQWDGAHGVGDFRNAY 103
>06_03_1067 - 27326167-27326295,27326572-27326656,27326993-27327033,
27327274-27327333,27327843-27327962,27328842-27329114,
27329186-27329257,27329798-27329860,27329957-27330139,
27330544-27330660,27330734-27332683,27332770-27332907,
27333003-27333284,27334650-27335522
Length = 1461
Score = 27.1 bits (57), Expect = 8.9
Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Frame = +1
Query: 28 GSPPQWSPV-YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP 204
G WSP + G P + +AW+++ S+ D G+ TY S PP
Sbjct: 808 GGVMYWSPAEHAGTGFSRPPSLSSDDSAWAWHEADVSQVLDDIPVGIPCTYNANSVSSPP 867
Query: 205 YGTSI------------KIAPVTTETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIG 348
TS+ + T MN E+ +S QD +D +++ ++ G
Sbjct: 868 -STSVCSQNESPDPLPQSVGHSMTANGMNSESLQSPSSMQDSPED-KTI--SVSKSVSCG 923
Query: 349 TETMQDADTAKWQMVQPV 402
+E ++ DT + M++P+
Sbjct: 924 SEVIK-GDTLPYAMLRPI 940
>04_04_0430 - 25153572-25154060
Length = 162
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 415 LAYRRPAVPSAIWPCR 368
+AYR+P VP A WP +
Sbjct: 30 VAYRKPPVPPAAWPSK 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,434,581
Number of Sequences: 37544
Number of extensions: 330786
Number of successful extensions: 649
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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