Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31590
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.) 142 2e-34
SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.) 110 8e-25
SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40) 84 8e-17
SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 1e-11
SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_1137| Best HMM Match : CC (HMM E-Value=2) 36 0.015
SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.11
SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23) 33 0.18
SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08) 31 0.43
SB_44881| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_40469| Best HMM Match : Crystallin (HMM E-Value=8.3) 31 0.43
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_12939| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_16195| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.0
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 4.0
SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13) 28 4.0
SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037) 28 5.3
SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_22092| Best HMM Match : WD40 (HMM E-Value=7.2e-07) 27 6.9
SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11) 27 6.9
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 27 9.2
SB_22396| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79) 27 9.2
>SB_25385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 142 bits (343), Expect = 2e-34
Identities = 67/162 (41%), Positives = 92/162 (56%)
Frame = +1
Query: 31 SPPQWSPVYTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYG 210
+PP W YT+ G+L +PYAE+ EPF AW+D +SRIDYYGGM T+Q + G
Sbjct: 337 TPPTWPQEYTLTGVLRLPYAEIEEPFQAWFDGGRKRSRIDYYGGMDSTFQRGDIL--TAG 394
Query: 211 TSIKIAPVTTETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQM 390
+ +I P++TET++N +C Q N T QSVLPD+ F ++G T D + W+
Sbjct: 395 ANFRICPMSTETKLNVRSCFQTNGTSASPVGPQSVLPDLAKFSFVGNSTYGDVKCSIWEY 454
Query: 391 VQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLLG 516
VG K NKYTM+ P P+ YEM GF+ L+G
Sbjct: 455 KLTVGHKRNKYTMYTSM------HDPPAPIHYEMLGFDDLIG 490
>SB_14239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 110 bits (264), Expect = 8e-25
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 5/168 (2%)
Frame = +1
Query: 25 KGSPPQWSPV-----YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTS 189
+ +PP P Y G L +P++++ EPF W+ +++++SRIDYY G +T+Q
Sbjct: 37 RSAPPPMKPFHFPRNYHATGKLQLPHSKIEEPFEVWFSAQHNRSRIDYYYGTDRTFQ--R 94
Query: 190 AVYPPYGTSIKIAPVTTETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 369
A P+G + KI P+ T+ + C + T+ +Q ++P+MTDFK+ G E A
Sbjct: 95 ADVGPHGEAFKIVPIYTDEKGGYIGCWHLEGTERTPIVVQPIVPNMTDFKFAGYEVYHGA 154
Query: 370 DTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
TAKW+ +N +T+WV P PVRYEMKG+++LL
Sbjct: 155 STAKWEYRYLAFGLMNAHTIWVTTA------DPPRPVRYEMKGYDNLL 196
>SB_44841| Best HMM Match : 7tm_1 (HMM E-Value=4.79999e-40)
Length = 1198
Score = 83.8 bits (198), Expect = 8e-17
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 5/158 (3%)
Frame = +1
Query: 55 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPV 234
Y G L++PY + EPF +WY + SRIDYY GM KT+Q + YG +K+ P
Sbjct: 1020 YHAIGTLHLPYDNIREPFESWYARDYNMSRIDYYYGMDKTFQRGDLM--DYGVLVKVVPA 1077
Query: 235 --TTETEMNKET--CLQVNSTQDQLQDIQSVLP-DMTDFKYIGTETMQDADTAKWQMVQP 399
+ +++K T C + Q QSVLP + FK+IG E T K+Q
Sbjct: 1078 HWGRDEDLDKNTISCWYRPGFRWSQQRGQSVLPAHLEHFKFIGEEIRSGMPTFKYQRNTT 1137
Query: 400 VGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
+ K N YT W+ K + P+RY M G+++LL
Sbjct: 1138 IFHKKNSYTFWMTKAKPHR------PLRYVMHGYDTLL 1169
Score = 48.8 bits (111), Expect = 3e-06
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 55 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMV 168
Y V+G L++PY E+ EPF AWY + SRIDYY G V
Sbjct: 878 YRVQGTLSLPYDEIVEPFEAWYAGDYNMSRIDYYYGKV 915
>SB_21723| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 66.5 bits (155), Expect = 1e-11
Identities = 36/96 (37%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Frame = +1
Query: 55 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPV 234
Y G+L++PY ++ EPF WY + SRIDYYGGM +TYQ YG + KI P
Sbjct: 39 YHATGVLSLPYGDIKEPFEVWYSGLHGMSRIDYYGGMDRTYQ--RGDLGKYGYACKIVPE 96
Query: 235 TTE-TEMNKETCLQVNSTQDQLQDIQSVLPDMTDFK 339
+E T + CL + QS++P FK
Sbjct: 97 FSELTGRTFKGCLHRRGNSNFQIKAQSIIPSPKFFK 132
Score = 55.6 bits (128), Expect = 2e-08
Identities = 22/42 (52%), Positives = 31/42 (73%)
Frame = +1
Query: 55 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQ 180
Y G+L +P +E++EPF W+ +++SRIDYYGG VKTYQ
Sbjct: 902 YHATGVLRLPTSEVNEPFEIWFSRPHNQSRIDYYGGDVKTYQ 943
>SB_39190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 55 YTVKGLLNIPYAELHEPFYAWYDSKNSKSRIDYYGG 162
Y V+G L++PY E+ EPF AWY + SRIDYY G
Sbjct: 72 YRVQGTLSLPYDEIVEPFEAWYAGDYNMSRIDYYYG 107
>SB_1137| Best HMM Match : CC (HMM E-Value=2)
Length = 410
Score = 36.3 bits (80), Expect = 0.015
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +1
Query: 307 QSVLP-DMTDFKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVR 483
QSV+P ++T+FK + ET + + ++Q +K N Y +W+ K + P+R
Sbjct: 232 QSVVPTNLTEFKMVAIETHRGHPSFRFQRKFSELNKTNTYILWITTHKPHR------PLR 285
Query: 484 YEMKGFNSLL 513
+EM G++ +L
Sbjct: 286 FEMIGYDDML 295
>SB_56601| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 33.5 bits (73), Expect = 0.11
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 346 GTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
G E + + AKW+ + +K+N YT++ + PVRYEM G+++LL
Sbjct: 3 GHEDFRGKNCAKWEHSFNIYNKVNTYTLYTTPSRPYT------PVRYEMMGYDTLL 52
>SB_48483| Best HMM Match : SH3_1 (HMM E-Value=7.1e-23)
Length = 936
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/27 (51%), Positives = 20/27 (74%)
Frame = -1
Query: 465 RVPFQSLLVFNPHRVFV*LIADRLYHL 385
++ F S +VF PHR ++ L+ DRLYHL
Sbjct: 525 QIVFPSHIVFTPHRSYL-LLTDRLYHL 550
>SB_50057| Best HMM Match : NACHT (HMM E-Value=1.4e-08)
Length = 1555
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 334 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
F+Y G + D +W V K NKY + K D P+P+R EM G+N++L
Sbjct: 1078 FQYAGEALIYDTLCTEWVYNISVMHKDNKYVFY-----NTKTDP-PLPMRLEMDGYNTVL 1131
>SB_44881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 133
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 334 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
F+Y G + D KW V K NKY + KT P+P+R EM G++++L
Sbjct: 51 FQYAGEALIHDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDTVL 104
>SB_40469| Best HMM Match : Crystallin (HMM E-Value=8.3)
Length = 339
Score = 31.5 bits (68), Expect = 0.43
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 334 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
F+Y G + D KW V K NKY + KT P+P+R EM G++++L
Sbjct: 46 FQYAGEALIDDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDTVL 99
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 31.5 bits (68), Expect = 0.43
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +1
Query: 220 KIAPVTTETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTA 378
K++PV T+ E ++ + Q +++DI ++ D+ D KY ADT+
Sbjct: 4087 KLSPVGTDVETIEQQMDDLKELQKEVEDIDELIADLNDQKYRVALQNPTADTS 4139
>SB_12939| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 575
Score = 31.1 bits (67), Expect = 0.56
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 316 LPDMTDFKYIGTET-MQDADTAKWQMVQPVGDKLN--KYTMWVKYKKTLKGDSVPIPVRY 486
LP +D K+ T Q ++ KW P N T+ V+Y+ G S+ +PVRY
Sbjct: 186 LPSPSDIKWSVPYTPRQISNDIKWSDPYPPRQISNGRSLTLSVRYQMISNGRSLTLPVRY 245
Query: 487 EMKG 498
+M G
Sbjct: 246 QMIG 249
>SB_16195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 30.7 bits (66), Expect = 0.74
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +1
Query: 334 FKYIGTETMQDADTAKWQMVQPVGDKLNKYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
F Y G + D KW V K NKY + KT P+P+R EM G++++L
Sbjct: 40 FHYAGEALIHDTLCTKWVYNISVMHKDNKYVFYA--TKT----DPPLPMRLEMDGYDTVL 93
>SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 259
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +3
Query: 216 YKDRAGHNGNRDEQG---DVPASQFDARSAPRHPISATGHDRF*IYRHRNNAGCRHGQMA 386
Y+DR H RD D +F R+ S HD IYR R+N G R+ +
Sbjct: 141 YEDRERHQRGRDRHHRDRDDSGCRFRDNEGKRY--SDLRHDGDKIYRDRDNEGKRNRDAS 198
Query: 387 DG 392
DG
Sbjct: 199 DG 200
>SB_43972| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 899
Score = 28.3 bits (60), Expect = 4.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 127 KNSKSRIDYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTETEMNKE 261
K S + + GG+ KT + V PP G K+ V +E+E K+
Sbjct: 400 KLSARKSNERGGVEKTRSKSEKVAPPKGHEAKVRTVKSESEAGKK 444
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 22 DKGSPPQWSPVYTVKGLLNI 81
DKGSPPQ+S + + +LNI
Sbjct: 451 DKGSPPQYSEITVIVKVLNI 470
>SB_41915| Best HMM Match : F5_F8_type_C (HMM E-Value=9.1e-13)
Length = 317
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +1
Query: 271 QVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQM--VQPVGDKLNKYTMWV 435
Q T + QD +S ++D KYIG + + T +W + +P +L+ + WV
Sbjct: 153 QEGYTGELCQDCKSPPIGISDEKYIGNSRIAGSSTGQWVLDYFEPYKGRLHGPSSWV 209
>SB_33200| Best HMM Match : Spc97_Spc98 (HMM E-Value=0.0037)
Length = 1235
Score = 27.9 bits (59), Expect = 5.3
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = +3
Query: 183 HVSGLPTLRYFYKDRAGHNGNRDEQGDVPASQF---DARSAPRHPISATGH 326
H GLP Y AG + G SQF D +++P HP SA GH
Sbjct: 579 HSEGLPDEGY----EAGTRHTKSGYGHPSDSQFQVTDVKTSPGHPRSAYGH 625
>SB_50663| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 437
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 82 PYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTS---AVYPPYGTSIKIA 228
PY+ +H P Y YD++ + YYG + Q + V PPY IA
Sbjct: 21 PYSSVHFPVYGQYDARQER----YYGPPLPRSQHPTRQDMVKPPYSYIALIA 68
>SB_22092| Best HMM Match : WD40 (HMM E-Value=7.2e-07)
Length = 338
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 142 RIDYYGGMVKTYQF-TSAVYPPYGTSIKIAPVTTETEMN 255
R + YG ++ + TS Y PYGTS++ +P T N
Sbjct: 293 RYNPYGTSLRYNPYGTSLRYNPYGTSLRYSPYGTSLRYN 331
>SB_18521| Best HMM Match : ig (HMM E-Value=7.5e-11)
Length = 1033
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +2
Query: 335 LNISAQKQCRMPTRPNGRWYSRSAIS 412
L+ S++ CR PTRP R++S +A+S
Sbjct: 34 LDESSRDVCRFPTRPLIRYFSFTALS 59
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Frame = +3
Query: 165 GQDLPVHV---SGLPTLRYFYKDRAGHNGNRDEQGDVPA-SQFDARSAPRH 305
GQD V + +G+P Y+ D GH D D+P ++D P H
Sbjct: 1174 GQDSEVELKRFAGIPRATYYRVDFYGHAQEIDAVNDLPGDKEYDEAVVPYH 1224
>SB_22396| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 27.1 bits (57), Expect = 9.2
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = -3
Query: 478 PVWAQSPLSKSSCI*PTSCICLAYRRPAVPSAIWPC 371
P+WA++P S C P C++ + P I C
Sbjct: 47 PMWARTPTDTSQCYDPIQGGCVSMKNPFRTQMINTC 82
>SB_55700| Best HMM Match : tRNA_bind (HMM E-Value=0.79)
Length = 632
Score = 27.1 bits (57), Expect = 9.2
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +1
Query: 238 TETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADT--AKWQMVQPVGDK 411
T+ ++ L + + ++ L++I S LP I E + DT A QM QP
Sbjct: 168 TQVVTKEDHQLHLETAKEFLEEIISNLP-------IKREENNNTDTHKANTQMEQPEQAN 220
Query: 412 LNKYTMWVKYKKTLKGD--SVPIPVRYE 489
+NK + K +KG S PIP +E
Sbjct: 221 INKSKSPARIAKPIKGGIRSPPIPKAFE 248
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.314 0.132 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,853,480
Number of Sequences: 59808
Number of extensions: 382216
Number of successful extensions: 1011
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1002
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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