Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31590
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 33 0.092
Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical pr... 30 0.85
Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical p... 29 2.6
AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA s... 29 2.6
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 28 4.6
AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical... 28 4.6
AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical ... 27 6.0
AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical ... 27 6.0
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 33.5 bits (73), Expect = 0.092
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +1
Query: 79 IPYAELHEPFYAWYDSKNSKSRIDYYGGMVKTYQFTSAVYPP-YGTSIKIAPVTTETEMN 255
IP+ ++ + ++K ++ +G V+ YQ T + PP Y +S P E+
Sbjct: 456 IPFGQVEQQPIPMNPFGSAKPTVNKFGMKVEPYQTTDYMLPPGYPSSSIYLPQPAYPEVK 515
Query: 256 KETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADT 375
+ + ++STQ Q +P T T+ D +
Sbjct: 516 PNSSVILSSTQSQNNTSPQTIPASASVTNSATSTVVDTSS 555
>Z48245-1|CAA88290.1| 356|Caenorhabditis elegans Hypothetical
protein T27D1.3 protein.
Length = 356
Score = 30.3 bits (65), Expect = 0.85
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Frame = -2
Query: 389 ICHLAVS--ASCIVSVPIYLKSVMSGSTDWMSWS*SCVELTCRHVS-LFISVSVVTGAI 222
+ +LAV+ A+ I ++P ++ V GSTDW+ S C CR++ +F+ S+ T I
Sbjct: 57 LLNLAVADLANLIFTIPEWIPPVFFGSTDWLFPSFLCP--VCRYLECVFLFASISTQMI 113
>Z81043-1|CAB02799.1| 755|Caenorhabditis elegans Hypothetical
protein C29F3.1 protein.
Length = 755
Score = 29.5 bits (63), Expect = 1.5
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 229 PVTTETEMNKETCLQVNSTQDQLQDIQSV 315
P TTE +NK ++N T D+LQ QSV
Sbjct: 49 PNTTENVLNKALFAEMNETLDRLQSDQSV 77
>Z66521-16|CAA91396.2| 793|Caenorhabditis elegans Hypothetical
protein W02B12.6a protein.
Length = 793
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 246
++EL + FY ++ SKN S S I D G T FT+A + I ++ +
Sbjct: 24 HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79
Query: 247 EMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 369
N + C++ + L D+ L T F+ +G + DA
Sbjct: 80 VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120
>AF188715-1|AAF05590.1| 793|Caenorhabditis elegans alanyl-tRNA
synthetase protein.
Length = 793
Score = 28.7 bits (61), Expect = 2.6
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 6/101 (5%)
Frame = +1
Query: 85 YAELHEPFYAWYDSKN-----SKSRI-DYYGGMVKTYQFTSAVYPPYGTSIKIAPVTTET 246
++EL + FY ++ SKN S S I D G T FT+A + I ++ +
Sbjct: 24 HSELRKSFYEFFKSKNHEILRSSSVIPDENDG---TLLFTNAGMNQFKPLI-LSSTESRR 79
Query: 247 EMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDA 369
N + C++ + L D+ L T F+ +G + DA
Sbjct: 80 VANIQKCIRAGGKHNDLDDVGKDLHHQTFFEMMGNWSFNDA 120
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 27.9 bits (59), Expect = 4.6
Identities = 11/41 (26%), Positives = 24/41 (58%)
Frame = +1
Query: 259 ETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAK 381
+TCLQ S+Q++ +Q V+P +F G+ + + ++ +
Sbjct: 318 KTCLQAESSQNKSSSMQPVMPVKIEFLLTGSVSQKISEAER 358
>AC025723-13|AAK29939.1| 286|Caenorhabditis elegans Hypothetical
protein Y54F10AM.11 protein.
Length = 286
Score = 27.9 bits (59), Expect = 4.6
Identities = 23/92 (25%), Positives = 44/92 (47%)
Frame = +1
Query: 238 TETEMNKETCLQVNSTQDQLQDIQSVLPDMTDFKYIGTETMQDADTAKWQMVQPVGDKLN 417
TE E+++ T + +D ++ +PD D + T+ D++ ++V+P ++
Sbjct: 182 TEEELDR-TMKMLAPAEDDHSQMELTVPD--DNASGSSGTLGDSEDTGAELVEPELSRIL 238
Query: 418 KYTMWVKYKKTLKGDSVPIPVRYEMKGFNSLL 513
+ T V + + SVP P YE GF+ L
Sbjct: 239 QRTFVVPRRS--RKLSVPEPEEYEEDGFSETL 268
>AF038612-3|AAB92045.2| 432|Caenorhabditis elegans Hypothetical
protein F13B6.3 protein.
Length = 432
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 455 FKVFLYLTHIVYLFSLSPTGCTICHLAVSASCIVSV 348
+ V L LFS SP+G TI ++ V A + S+
Sbjct: 123 YMVELVKDRFAVLFSKSPSGSTITNITVDADTVFSI 158
>AC098856-7|AAL27253.2| 155|Caenorhabditis elegans Hypothetical
protein Y37F4.8 protein.
Length = 155
Score = 27.5 bits (58), Expect = 6.0
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 497 PF-ISYRTGMGTESPFKVFLYLTHIVYLFSLSPTGCTIC 384
PF + + T M S VF+ L I +L P GCT C
Sbjct: 27 PFRVKHTTNMTFSSTLNVFVLLALISASQALPPKGCTSC 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.132 0.402
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,851,401
Number of Sequences: 27780
Number of extensions: 279502
Number of successful extensions: 650
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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