Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31589
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    28   0.042
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    28   0.042
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    28   0.042
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    28   0.042
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    26   0.17 
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    21   6.4  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   6.4  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.042
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 277 VPDLLHVIPVGDDTVLD 227
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.042
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 277 VPDLLHVIPVGDDTVLD 227
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.042
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 277 VPDLLHVIPVGDDTVLD 227
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 27.9 bits (59), Expect = 0.042
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -2

Query: 277 VPDLLHVIPVGDDTVLD 227
           +PD+  +IP GDDT +D
Sbjct: 355 LPDISEIIPTGDDTTMD 371


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 25.8 bits (54), Expect = 0.17
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 192  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 97
            W + P+  ++W   T +PWW    T    T R
Sbjct: 1035 WTTKPS--TWWSSTTTSPWWTTTTTRRTTTTR 1064



 Score = 21.0 bits (42), Expect = 4.8
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = -3

Query: 192  WASSPT*ESFWPIPTITPWWRGRPTMDGKTAR 97
            W SS T   +W   T       RPT    T R
Sbjct: 1042 WWSSTTTSPWWTTTTTRRTTTTRPTTTSTTTR 1073


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.2
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +2

Query: 239 IITNWDDMEKIWHHTFYNELRVXPEEHPVLXT 334
           ++T+W + E+I++     +L V     PV+ T
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3

Query: 36  RL*STMAPACARPVSPATTRPAPSSRPSW 122
           R+  T+ P   RP+ PAT   AP     W
Sbjct: 28  RVLPTVEPGYLRPLIPAT---APQKPDKW 53


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 27  MLLRL*STMAPACARPVSPATTRPAPSSR 113
           +L  L S+ +    +P + +  RPAP+SR
Sbjct: 237 LLAGLQSSGSSRSHQPATKSKPRPAPASR 265


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,278
Number of Sequences: 336
Number of extensions: 1828
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)