Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31589
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 284 2e-77
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 283 5e-77
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 283 5e-77
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 283 5e-77
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 283 5e-77
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 283 5e-77
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 283 5e-77
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 283 5e-77
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 272 9e-74
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 244 3e-65
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 189 6e-49
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 188 1e-48
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 4e-48
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 182 7e-47
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 159 1e-39
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 122 1e-28
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 105 2e-23
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 75 3e-14
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 47 6e-06
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 31 0.25
AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical ... 30 0.78
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 1.0
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 3.1
AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical ... 28 3.1
Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen... 27 4.1
Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen... 27 4.1
U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein ... 27 4.1
U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein ... 27 4.1
U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV) coll... 27 4.1
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 27 4.1
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 27 4.1
Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical p... 26 9.5
AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical ... 26 9.5
AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 284 bits (697), Expect = 2e-77
Identities = 128/134 (95%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 126/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDDDVAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 283 bits (693), Expect = 5e-77
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKM 373
SKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 374 TXIMFETLNSPAMY 415
T IMFET N+PAMY
Sbjct: 121 TQIMFETFNTPAMY 134
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 272 bits (666), Expect = 9e-74
Identities = 120/132 (90%), Positives = 128/132 (96%)
Frame = +2
Query: 20 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 199
++++AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 200 RGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTX 379
RGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELR+ PEEHPVL TEAPLNPK+NREKMT
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 380 IMFETLNSPAMY 415
IMFET N+PAMY
Sbjct: 122 IMFETFNTPAMY 133
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 244 bits (596), Expect = 3e-65
Identities = 109/116 (93%), Positives = 112/116 (96%)
Frame = +2
Query: 68 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIIT 247
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+T
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 248 NWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXIMFETLNSPAMY 415
NWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKMT IMFET N+PAMY
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMY 120
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 189 bits (461), Expect = 6e-49
Identities = 84/90 (93%), Positives = 86/90 (95%)
Frame = +2
Query: 146 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPV 325
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGI+TNWDDMEKIWHHTFYNELRV PEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 326 LXTEAPLNPKANREKMTXIMFETLNSPAMY 415
L TEAPLNPKANREKMT IMFET N+PAMY
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMY 90
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 188 bits (458), Expect = 1e-48
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKI 271
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKI 271
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 4e-48
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDD+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDMEKI 271
SKRGILTLKYPIEHGI+TNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 182 bits (444), Expect = 7e-47
Identities = 82/83 (98%), Positives = 83/83 (100%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 193
MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 194 SKRGILTLKYPIEHGIITNWDDM 262
SKRGILTLKYPIEHGI+TNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 159 bits (385), Expect = 1e-39
Identities = 71/136 (52%), Positives = 97/136 (71%), Gaps = 4/136 (2%)
Frame = +2
Query: 20 DDDVAA---LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA 190
D DV A +V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A
Sbjct: 2 DYDVIANQPVVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKA 61
Query: 191 QSKRGILTLKYPIEHGIITNWDDMEKIWHHTF-YNELRVXPEEHPVLXTEAPLNPKANRE 367
+S RG+ +++YP+EHGI+ NW DMEKIW + F ++L++ PEEHPVL T+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 368 KMTXIMFETLNSPAMY 415
+ I FET N PA+Y
Sbjct: 122 RSAEIFFETFNVPALY 137
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 122 bits (293), Expect = 1e-28
Identities = 60/129 (46%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
Frame = +2
Query: 38 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 211
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 212 TLKYPIEHGIITNWDDMEKIWHHTFYNE-LRVXPEEHPVLXTEAPLNPKANREKMTXIMF 388
+ YP+++GI+ NWDDM +W HTF E L + P+E +L TE PLNP +NREKM +MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 389 ETLNSPAMY 415
E ++Y
Sbjct: 129 EQYGFNSIY 137
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 105 bits (251), Expect = 2e-23
Identities = 58/147 (39%), Positives = 76/147 (51%), Gaps = 13/147 (8%)
Frame = +2
Query: 14 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 157
M + A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 158 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXT 334
D ++GDEA S T+KYPI HGI+ +WD ME+ W + LR PE+H L T
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 335 EAPLNPKANREKMTXIMFETLNSPAMY 415
E PLN NRE IMFE+ N P +Y
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLY 147
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 74.5 bits (175), Expect = 3e-14
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 196
D+V+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 197 KR------GILTLKYP---------IEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLX 331
KR G + P ++ G+I +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 332 TEAPLNPKANREKMTXIMFETLNSPAMY 415
+E+ N +A REK+T IMFE PA Y
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYY 156
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 29 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 208
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 209 LTLKYPIEHGIITNWDDMEKIWHHTF 286
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 46.8 bits (106), Expect = 6e-06
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +2
Query: 29 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 208
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 209 LTLKYPIEHGIITNWDDMEKIWHHTF 286
++ PIE G + NWD ++IW TF
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF 82
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 31.5 bits (68), Expect = 0.25
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 45 STMAPACARPVSPATTRPAPSSRP 116
+T AP PATTRPAP+S+P
Sbjct: 317 ATRAPPATTRAPPATTRPAPASQP 340
>AC199170-9|ABO33267.1| 388|Caenorhabditis elegans Hypothetical
protein T08D2.8 protein.
Length = 388
Score = 29.9 bits (64), Expect = 0.78
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +3
Query: 36 RL*STMAPACARPVSPATTRPAPSSRPSWVALATRA 143
RL S +AP A P S A TR APS + VA RA
Sbjct: 231 RLSSAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 266
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/37 (35%), Positives = 17/37 (45%)
Frame = -3
Query: 159 PIPTITPWWRGRPTMDGKTARGASSPAKPALHMPEPL 49
P T TP RGRP + ++ P P P+PL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 3.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2
Query: 68 KAGFAGDDAPRAVFPSIVGRPRHQG 142
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>AC024136-6|AAF35965.3| 425|Caenorhabditis elegans Hypothetical
protein F54A3.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +3
Query: 45 STMAPACARPVSPATTRPAPSSRPSWVALATRA 143
S +AP A P S A TR APS + VA RA
Sbjct: 238 SAVAPRRAPPASAAPTRRAPSPKAPVVAPTRRA 270
>Z22964-2|CAA80537.1| 1759|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1759
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 209 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 126
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>Z22964-1|CAA80536.1| 1758|Caenorhabditis elegans a2(IV) collagen
protein.
Length = 1758
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 209 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 126
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-4|AAA96216.1| 1758|Caenorhabditis elegans Lethal protein 2,
isoform a protein.
Length = 1758
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 209 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 126
GY GP P + GP P PG EG
Sbjct: 386 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 413
>U53342-3|AAA96215.1| 1759|Caenorhabditis elegans Lethal protein 2,
isoform b protein.
Length = 1759
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 209 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 126
GY GP P + GP P PG EG
Sbjct: 387 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 414
>U22327-1|AAA64312.1| 1795|Caenorhabditis elegans alpha2(IV)
collagen protein.
Length = 1795
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = -1
Query: 209 GYLSCSGPRHPRRSLSGPYRPSRPGGEG 126
GY GP P + GP P PG EG
Sbjct: 423 GYPGAPGPAGPIGNTGGPGLPGYPGNEG 450
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 352 GVEGGFGXQHGVLLGXDTQLIV--EGVVPDLLHVIPVGDDTVLDGVLQSXDTSLALGLVT 179
G+E GF +L G ++ V E + +L +IP + + D LA GLVT
Sbjct: 375 GLENGFYLSPCILTGITPKMTVYREEIFGSVLLIIPFDTEDEAIKIANDTDMGLAAGLVT 434
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -2
Query: 352 GVEGGFGXQHGVLLGXDTQLIV--EGVVPDLLHVIPVGDDTVLDGVLQSXDTSLALGLVT 179
G+E GF +L G ++ V E + +L +IP + + D LA GLVT
Sbjct: 559 GLENGFYLSPCILTGITPKMTVYREEIFGSVLLIIPFDTEDEAIKIANDTDMGLAAGLVT 618
>Z83225-2|CAB05722.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 122 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 286
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +2
Query: 248 NWDDMEKIWHHTFYNE--LRVXPEEHPV 325
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>Z81097-19|CAB03177.1| 732|Caenorhabditis elegans Hypothetical
protein F42H11.2 protein.
Length = 732
Score = 26.2 bits (55), Expect = 9.5
Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Frame = +2
Query: 122 GRPRHQGVMVGMGQKDSYVGD----EAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTF 286
G PRH+ + G+ ++++V + EA + + K HG +WD++ K + TF
Sbjct: 629 GIPRHE-ISHGVSDEEAFVREASIIEAVKLKNLRNKKAGEFHGTTKSWDNITKSEYGTF 686
>AL021572-1|CAA16516.2| 654|Caenorhabditis elegans Hypothetical
protein W06H3.1 protein.
Length = 654
Score = 26.2 bits (55), Expect = 9.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 314 EHPVLXTEAPLNPKANREKMT 376
E+P + + PLNP+ EK+T
Sbjct: 129 ENPYIGAKTPLNPQERNEKLT 149
>AF125960-3|AAD14737.1| 446|Caenorhabditis elegans Hypothetical
protein T12B3.1 protein.
Length = 446
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 239 IITNWDDMEKIWHHTFYNELRVXPE 313
++ NWD EK W TF+ L+ E
Sbjct: 382 VLQNWDQTEKDWSPTFWFLLKCIRE 406
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,926,195
Number of Sequences: 27780
Number of extensions: 187912
Number of successful extensions: 934
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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