Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31589
(416 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 258 1e-69
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 257 2e-69
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 257 2e-69
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 257 2e-69
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 257 2e-69
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 256 3e-69
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 256 3e-69
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 256 3e-69
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 256 3e-69
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 237 2e-63
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 188 1e-48
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 1e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 133 4e-32
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 107 3e-24
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 102 8e-23
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 99 1e-21
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 69 1e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 1e-10
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 60 8e-10
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 0.54
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 0.54
At4g27520.1 68417.m03952 plastocyanin-like domain-containing pro... 28 2.2
At3g04570.1 68416.m00485 DNA-binding protein-related contains Pf... 28 2.9
At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to b... 27 3.8
At4g26670.1 68417.m03842 mitochondrial import inner membrane tra... 27 5.1
At3g32904.1 68416.m04164 hypothetical protein 27 5.1
At5g07730.1 68418.m00886 expressed protein 27 6.7
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 6.7
At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative / cel... 27 6.7
At5g64580.1 68418.m08116 AAA-type ATPase family protein similar ... 26 8.9
At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical t... 26 8.9
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 8.9
At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein heli... 26 8.9
At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein sim... 26 8.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 258 bits (631), Expect = 1e-69
Identities = 115/131 (87%), Positives = 122/131 (93%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 257 bits (630), Expect = 2e-69
Identities = 115/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 257 bits (630), Expect = 2e-69
Identities = 115/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N+PAMY
Sbjct: 125 MFETFNTPAMY 135
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 257 bits (629), Expect = 2e-69
Identities = 114/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRV PEEHP+L TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N+PAMY
Sbjct: 125 MFETFNAPAMY 135
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 257 bits (629), Expect = 2e-69
Identities = 114/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI+ NWDDMEKIWHHTFYNELRV PEEHP+L TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N+PAMY
Sbjct: 125 MFETFNAPAMY 135
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 256 bits (628), Expect = 3e-69
Identities = 115/131 (87%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
+D+ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHGI++NWDDMEKIWHHTFYNELRV PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET N PAMY
Sbjct: 125 MFETFNVPAMY 135
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 256 bits (628), Expect = 3e-69
Identities = 112/131 (85%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET NSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 256 bits (628), Expect = 3e-69
Identities = 112/131 (85%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET NSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 256 bits (628), Expect = 3e-69
Identities = 112/131 (85%), Positives = 121/131 (92%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
DD+ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GILTLKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHPVL TEAPLNPKANREKMT I
Sbjct: 65 GILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQI 124
Query: 383 MFETLNSPAMY 415
MFET NSPAMY
Sbjct: 125 MFETFNSPAMY 135
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 237 bits (580), Expect = 2e-63
Identities = 101/131 (77%), Positives = 119/131 (90%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 202
D+ A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 203 GILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXI 382
GIL+LKYPIEHG+++NWDDMEKIWHHTFYNELR+ PEEHP+L TEAPLNPK NREKMT I
Sbjct: 66 GILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQI 125
Query: 383 MFETLNSPAMY 415
MFE+ P+MY
Sbjct: 126 MFESFAFPSMY 136
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 188 bits (459), Expect = 1e-48
Identities = 85/126 (67%), Positives = 99/126 (78%)
Frame = +2
Query: 38 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 217
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 218 KYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXIMFETL 397
K P+EHGI+ NWDDMEKIWH+TFYNELRV PEEHPVL TEAP NPKANREKMT IMFE+
Sbjct: 59 KDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESF 118
Query: 398 NSPAMY 415
+ PAMY
Sbjct: 119 DVPAMY 124
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (375), Expect = 1e-38
Identities = 65/90 (72%), Positives = 79/90 (87%)
Frame = +2
Query: 146 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPV 325
MVGM + D +VGD+A+++ GILTL YP+EHG+++NWDDMEKIW+HTFY+ELRV PEEHPV
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPV 60
Query: 326 LXTEAPLNPKANREKMTXIMFETLNSPAMY 415
L TEAPLNPKA+REKMT IMFET P+MY
Sbjct: 61 LLTEAPLNPKADREKMTQIMFETFAVPSMY 90
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 133 bits (322), Expect = 4e-32
Identities = 59/133 (44%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQS 196
D+ +V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+
Sbjct: 2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSE 61
Query: 197 KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMT 376
R L + YP+ +GI+ NWDDME +W H FYNEL++ P + +L T+ PLNP NREKM
Sbjct: 62 LRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREKMI 121
Query: 377 XIMFETLNSPAMY 415
MFE N ++
Sbjct: 122 ETMFEKYNFAGVF 134
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 107 bits (257), Expect = 3e-24
Identities = 60/153 (39%), Positives = 86/153 (56%), Gaps = 22/153 (14%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM--------VGMGQKDS-- 172
D+V+A+VVD GS CKAG+AG+DAP+AVFPS++G M +DS
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKT 64
Query: 173 -----------YVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEE 316
YVG +A S +R + + PI+ GI+++WD ++ IW H F + L + P E
Sbjct: 65 ESEKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTE 124
Query: 317 HPVLXTEAPLNPKANREKMTXIMFETLNSPAMY 415
HP+L E PLN + REK +MFE PA++
Sbjct: 125 HPMLLAEPPLNTQQQREKAAELMFEKYKVPALF 157
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 102 bits (245), Expect = 8e-23
Identities = 53/132 (40%), Positives = 78/132 (59%), Gaps = 16/132 (12%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------------M 157
D+V+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 158 GQKDSYVGDEAQS-KRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXT 334
G++ Y G +A + +R + + P + GI+T+WD ++ +W H F N L + P EHP+L
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 335 EAPLNPKANREK 370
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 98.7 bits (235), Expect = 1e-21
Identities = 59/148 (39%), Positives = 80/148 (54%), Gaps = 21/148 (14%)
Frame = +2
Query: 35 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-----------------RPRHQ-GVMVGMG 160
A+V+DNG+G K GFAG+ P + P++V + +H GV +
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVVAVNESFLNQSKSSSKATWQTQHNAGVAADL- 66
Query: 161 QKDSYVGDEAQSK-RGILT--LKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLX 331
D Y+GDEA +K R T L YPIEHG + +WD ME+ W +N LR PE+H L
Sbjct: 67 --DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLL 124
Query: 332 TEAPLNPKANREKMTXIMFETLNSPAMY 415
TE+PL P +RE I+FET N P +Y
Sbjct: 125 TESPLTPPESREYTGEILFETFNVPGLY 152
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 68.9 bits (161), Expect = 1e-12
Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 217
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD S
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGDLDPSMMKYFDC 77
Query: 218 -----KYPIEHGIITNWDDMEKIWHHTFYNELRVXPE--EHPVLXTEAPLNPKANREKMT 376
+ P + ++ ++ ME I + F + L +HP+L TE NP +R KM
Sbjct: 78 TRSGPRSPFDSNVVYQFEIMEYILDYAF-DRLGANGSGIDHPILITECACNPVQSRSKMA 136
Query: 377 XIMFETLNSPAM 412
++FET PA+
Sbjct: 137 ELLFETYGVPAV 148
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 62.1 bits (144), Expect = 1e-10
Identities = 35/126 (27%), Positives = 60/126 (47%)
Frame = +2
Query: 38 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 217
+V+DNG G+ KAG G+ P V P+ + +P + + + DE +
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTT-LSDEIDLTSA--AV 61
Query: 218 KYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKANREKMTXIMFETL 397
+ PI+ G + N D +IW H F + L + P +L TEAPL+ + + ++FE
Sbjct: 62 RRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDF 121
Query: 398 NSPAMY 415
++Y
Sbjct: 122 GFSSLY 127
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 59.7 bits (138), Expect = 8e-10
Identities = 47/129 (36%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +2
Query: 35 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 211
ALVVD GS KAG A D +P + PS + R MV G + D + +
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDV 53
Query: 212 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVXP-EEHPVLXTEAPLNPKANREKMTXIMF 388
TL PIE G+I +WD ME + + Y L E +L T+ PKA RE++ +MF
Sbjct: 54 TLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMF 112
Query: 389 ETLNSPAMY 415
ET N Y
Sbjct: 113 ETFNVSGFY 121
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 0.54
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 182 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKAN 361
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 362 REK 370
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 30.3 bits (65), Expect = 0.54
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 182 DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVXPEEHPVLXTEAPLNPKAN 361
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 362 REK 370
REK
Sbjct: 225 REK 227
>At4g27520.1 68417.m03952 plastocyanin-like domain-containing
protein similar to PIR|JC7196 phytocyanin-related
protein Pn14 {Ipomoea nil}; contains Pfam profile
PF02298: Plastocyanin-like domain
Length = 349
Score = 28.3 bits (60), Expect = 2.2
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 48 TMAPACARPVSPATTRPAPSSRPSWVA 128
+MAP PVSP T+ PAP S V+
Sbjct: 202 SMAPKSGSPVSPTTSPPAPPKSTSPVS 228
>At3g04570.1 68416.m00485 DNA-binding protein-related contains Pfam
domain PF03479: Domain of unknown function (DUF296),
found in AT-hook motifs Pfam:PF02178
Length = 315
Score = 27.9 bits (59), Expect = 2.9
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Frame = -3
Query: 141 PWWRGRPTMDG--KTARGASSPAKPALHM 61
PWW G+ + G T G+S KP LH+
Sbjct: 4 PWWTGQVNLSGLETTPPGSSQLKKPDLHI 32
>At1g13830.1 68414.m01623 beta-1,3-glucanase-related similar to
beta-1,3-glucanase-like protein (GI:14279169) [Olea
europaea] similar to Glucan endo-1,3-beta-glucosidase
precursor (EC 3.2.1.39) ((1-3)-beta- glucan
endohydrolase) ((1-3)-beta-glucanase) (Beta-1,3-
endoglucanase) (Swiss-Prot:P52409) [Triticum aestivum]
Length = 197
Score = 27.5 bits (58), Expect = 3.8
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 45 STMAPACARPVSPATTRPAPSSRP 116
S +A C P SP++TR PS+ P
Sbjct: 98 SNLANGCIYPSSPSSTRSPPSTTP 121
>At4g26670.1 68417.m03842 mitochondrial import inner membrane
translocase subunit Tim17/Tim22/Tim23 family protein
weak similarity to SP|Q9Z0V8 Mitochondrial import inner
membrane translocase subunit TIM17 A {Mus musculus};
contains Pfam profile PF02466: Mitochondrial import
inner membrane translocase subunit Tim17
Length = 210
Score = 27.1 bits (57), Expect = 5.1
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +2
Query: 20 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 199
+D ALV +C FAGD A AV SI G G+ G K S+ D QS
Sbjct: 32 NDSSKALVTIPAPAVCLFRFAGDAAGGAVMGSIFG--YGSGLFKKKGFKGSF-ADAGQSA 88
Query: 200 RGILTL 217
+ L
Sbjct: 89 KTFAVL 94
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 27.1 bits (57), Expect = 5.1
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -3
Query: 186 SSPT*ESFWPIPTITPWWRGRPTMDGKTARGASSPAKPALHMP 58
+SP+ W IP TP W G P+ + +SSP P L P
Sbjct: 287 NSPSNVPQWTIPPTTPQW-GTPS---SMPQWSSSPTAPQLSSP 325
>At5g07730.1 68418.m00886 expressed protein
Length = 264
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -3
Query: 201 LLLWASSPT*ESFWPIPTITPWWRGRPTMDGKTARG 94
LL W S T SF+P+ I WW R K +G
Sbjct: 187 LLTWFSK-TIRSFYPVLAIAIWWWMRVRAPRKRVKG 221
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 6.7
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +2
Query: 23 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM 148
+D+ A + + G G+C A +D + V I GR +GV+
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVV 673
>At1g64390.1 68414.m07298 endo-1,4-beta-glucanase, putative /
cellulase, putative similar to endo-beta-1,4-glucanase
GI:4972236 from [Fragaria x ananassa] (Plant Mol. Biol.
40, 323-332 (1999))
Length = 620
Score = 26.6 bits (56), Expect = 6.7
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 97 GRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 5
G +AGET A A A + ++RSN V + L L
Sbjct: 169 GSDLAGETAAAMAAASIVFRRSNPVYSRLLL 199
>At5g64580.1 68418.m08116 AAA-type ATPase family protein similar to
zinc dependent protease [Arabidopsis thaliana]
GI:7650138; contains Pfam profile PF00004: ATPase AAA
family
Length = 855
Score = 26.2 bits (55), Expect = 8.9
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 176 VGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYN 292
+G+E SK+ I+ ++ ++ I W+D+ K H N
Sbjct: 187 LGEEEDSKKEIIFRRHIVDRMPIDGWNDVWKKLHQQIVN 225
>At4g02020.1 68417.m00272 zeste-like protein 1 (EZA1) identical to
enhancer of zeste-like protein 1(EZA1) (GI:4185507)
[Arabidopsis thaliana]; similar to polycomb group
[Arabidopsis thaliana] GI:1903019 (curly leaf); contains
Pfam profile PF00856: SET domain
Length = 856
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 145 DGRYGPERLLRG*RGPEQERYPXSEVPHRARYHHQ 249
D RYGP++ R PE + S + HR HQ
Sbjct: 820 DYRYGPDQAPVWARKPEGSKKDDSAITHRRARKHQ 854
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 8.9
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -3
Query: 135 WRGRPTMDGKTARGASSPAKPA--LHMPEPL 49
WR T G+ + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At2g42270.1 68415.m05232 U5 small nuclear ribonucleoprotein helicase,
putative
Length = 2172
Score = 26.2 bits (55), Expect = 8.9
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 218 KYPIEHGIITNWDDMEKIWHHTFY-NELRVXPEEHPVLXTEAPLNPKANREKMTXIMFET 394
KY II +D EKI HH ++ + RV E+H + T P + + + +
Sbjct: 1241 KYVEPFWIIVEDNDGEKILHHEYFLFKKRVIDEDHTLNFTVPISEPIPPQYFIRVVSDKW 1300
Query: 395 LNSPAM 412
L+SP +
Sbjct: 1301 LDSPTV 1306
>At2g32990.1 68415.m04043 glycosyl hydrolase family 9 protein
similar to endo-beta-1,4-glucanase GI:4972236 from
[Fragaria x ananassa]
Length = 525
Score = 26.2 bits (55), Expect = 8.9
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 109 EDGAGRVVAGETGLAHAGAIVDYKRSNIVVAHLEL 5
E+ G +AGET A A A + ++ +N +HL L
Sbjct: 179 ENNPGSDIAGETAAAMAAASIVFRSTNPHYSHLLL 213
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,750,138
Number of Sequences: 28952
Number of extensions: 182008
Number of successful extensions: 622
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 635399168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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