Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31586
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical p... 62 2e-10
Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical pr... 62 2e-10
Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein. 48 4e-06
AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein. 48 4e-06
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 42 2e-04
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 42 2e-04
U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical pr... 33 0.16
>Z22177-12|CAA80152.1| 974|Caenorhabditis elegans Hypothetical
protein F54G8.4 protein.
Length = 974
Score = 62.1 bits (144), Expect = 2e-10
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -3
Query: 505 GTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
G F+ +FG+WG G G+ KG+E + V G+I+V DRENHR+Q+F
Sbjct: 931 GQFVSSFGTWGGGAGQLKGVEDVCVTADGSIVVTDRENHRIQIF 974
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G L +FG G G+ +F G+AV G+I V D++NHRVQVF
Sbjct: 788 EGDHLFSFGGHGQGNAKFNNPWGVAVDDLGSIYVADKDNHRVQVF 832
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+R FG +G+G G+ G+A + +IV DR NHR+ VF
Sbjct: 742 DGKFVRQFGGYGAGAGQLDSAAGLA-SSKLRVIVSDRYNHRISVF 785
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = -3
Query: 511 PDGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
P G L +FG G G+FK GIA+ + N+I+ D N+R+QVF
Sbjct: 882 PHGVHLFSFGEEGFHGGQFKFPRGIAIDSQENLIIADSGNNRIQVF 927
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG G+ DGE GI ++GG + CD NHRV VF
Sbjct: 702 FGRKGAKDGELNWPRGICALSGGLVATCDSSNHRVCVF 739
>Z19155-5|CAA79562.1| 974|Caenorhabditis elegans Hypothetical protein
F54G8.4 protein.
Length = 974
Score = 62.1 bits (144), Expect = 2e-10
Identities = 23/44 (52%), Positives = 33/44 (75%)
Frame = -3
Query: 505 GTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
G F+ +FG+WG G G+ KG+E + V G+I+V DRENHR+Q+F
Sbjct: 931 GQFVSSFGTWGGGAGQLKGVEDVCVTADGSIVVTDRENHRIQIF 974
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G L +FG G G+ +F G+AV G+I V D++NHRVQVF
Sbjct: 788 EGDHLFSFGGHGQGNAKFNNPWGVAVDDLGSIYVADKDNHRVQVF 832
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/45 (44%), Positives = 28/45 (62%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+R FG +G+G G+ G+A + +IV DR NHR+ VF
Sbjct: 742 DGKFVRQFGGYGAGAGQLDSAAGLA-SSKLRVIVSDRYNHRISVF 785
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = -3
Query: 511 PDGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
P G L +FG G G+FK GIA+ + N+I+ D N+R+QVF
Sbjct: 882 PHGVHLFSFGEEGFHGGQFKFPRGIAIDSQENLIIADSGNNRIQVF 927
Score = 41.5 bits (93), Expect = 3e-04
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG G+ DGE GI ++GG + CD NHRV VF
Sbjct: 702 FGRKGAKDGELNWPRGICALSGGLVATCDSSNHRVCVF 739
>Z81467-3|CAC42255.1| 1143|Caenorhabditis elegans Hypothetical protein
C12C8.3b protein.
Length = 1143
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+ FG+ G+ G+F GI + NI+V D++NHRVQVF
Sbjct: 871 DGNFISKFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVF 915
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -3
Query: 496 LRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
++ +GS G GDG F +G+ + G+I+VCD N+RVQVF
Sbjct: 1018 MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1058
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG GSGDGE GI V G +IV DR N+RVQ+F
Sbjct: 831 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIF 868
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G FL FG G G F G+A + I V D NHRVQ+F
Sbjct: 918 NGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIF 962
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 505 GTFLRAFGSWGSGDGEFKGLEGIAVMTG 422
G+ +A GS GSGDG G+E ++ +G
Sbjct: 438 GSVRQALGSVGSGDGHVSGVENDSIGSG 465
>Z81467-2|CAC42254.1| 1147|Caenorhabditis elegans Hypothetical protein
C12C8.3a protein.
Length = 1147
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+ FG+ G+ G+F GI + NI+V D++NHRVQVF
Sbjct: 875 DGNFISKFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVF 919
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -3
Query: 496 LRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
++ +GS G GDG F +G+ + G+I+VCD N+RVQVF
Sbjct: 1022 MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1062
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG GSGDGE GI V G +IV DR N+RVQ+F
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIF 872
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G FL FG G G F G+A + I V D NHRVQ+F
Sbjct: 922 NGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIF 966
>AF195611-1|AAF15530.1| 1147|Caenorhabditis elegans LIN-41B protein.
Length = 1147
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+ FG+ G+ G+F GI + NI+V D++NHRVQVF
Sbjct: 875 DGNFISKFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVF 919
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -3
Query: 496 LRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
++ +GS G GDG F +G+ + G+I+VCD N+RVQVF
Sbjct: 1022 MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1062
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG GSGDGE GI V G +IV DR N+RVQ+F
Sbjct: 835 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIF 872
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G FL FG G G F G+A + I V D NHRVQ+F
Sbjct: 922 NGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIF 966
>AF195610-1|AAF15529.1| 1143|Caenorhabditis elegans LIN-41A protein.
Length = 1143
Score = 48.0 bits (109), Expect = 4e-06
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
DG F+ FG+ G+ G+F GI + NI+V D++NHRVQVF
Sbjct: 871 DGNFISKFGTSGNRPGQFDRPAGITTNSLNNIVVADKDNHRVQVF 915
Score = 46.4 bits (105), Expect = 1e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -3
Query: 496 LRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
++ +GS G GDG F +G+ + G+I+VCD N+RVQVF
Sbjct: 1018 MKVYGSEGDGDGMFVRPQGVVIDPEGHILVCDSRNNRVQVF 1058
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/38 (55%), Positives = 24/38 (63%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG GSGDGE GI V G +IV DR N+RVQ+F
Sbjct: 831 FGKEGSGDGELCRPWGICVDQRGRVIVADRSNNRVQIF 868
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
+G FL FG G G F G+A + I V D NHRVQ+F
Sbjct: 918 NGMFLLKFGDRGRAVGYFNYPWGVATNSHNAIAVSDTRNHRVQIF 962
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -3
Query: 505 GTFLRAFGSWGSGDGEFKGLEGIAVMTG 422
G+ +A GS GSGDG G+E ++ +G
Sbjct: 438 GSVRQALGSVGSGDGHVSGVENDSIGSG 465
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG +G +G+F G+AV G+I+V D NHR+QVF
Sbjct: 576 FGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVF 613
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/38 (47%), Positives = 25/38 (65%)
Frame = -3
Query: 487 FGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQVF 374
FG +G +G+F G+AV G+I+V D NHR+QVF
Sbjct: 576 FGEFGVMEGQFTEPSGVAVNGQGDIVVADTNNHRIQVF 613
>U80438-6|AAB37637.2| 663|Caenorhabditis elegans Hypothetical
protein T19B4.1 protein.
Length = 663
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3
Query: 508 DGTFLRAFGSWGSGDGEFKGLEGIAVMTGGNIIVCDRENHRVQ 380
+G +R FG G G+F I + G ++V DREN RVQ
Sbjct: 507 NGKRIRQFGLPGEDAGQFNLPHDIVSDSAGRLLVTDRENGRVQ 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,531,063
Number of Sequences: 27780
Number of extensions: 171140
Number of successful extensions: 321
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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