BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31583
(516 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p pro... 28 8.6
AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH0492... 28 8.6
AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-P... 28 8.6
AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-P... 28 8.6
AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-P... 28 8.6
AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-P... 28 8.6
>BT015296-1|AAT94525.1| 1923|Drosophila melanogaster AT26369p
protein.
Length = 1923
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 646 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 684
>AF181630-1|AAD55416.1| 1228|Drosophila melanogaster BcDNA.GH04922
protein.
Length = 1228
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 176 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 214
>AE013599-2711|AAM68461.1| 1922|Drosophila melanogaster CG30116-PA,
isoform A protein.
Length = 1922
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 646 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 684
>AE013599-2710|AAF57680.2| 1701|Drosophila melanogaster CG30116-PD,
isoform D protein.
Length = 1701
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 646 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 684
>AE013599-2709|AAF57681.2| 1698|Drosophila melanogaster CG30116-PC,
isoform C protein.
Length = 1698
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 646 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 684
>AE013599-2708|AAM68460.1| 1698|Drosophila melanogaster CG30116-PB,
isoform B protein.
Length = 1698
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 246 SSSIELQWRNNYRITLQKRRTMLCIFLPRTLFHCFTSLKFF 368
S + +QWR+NY ++ KRR M + R+L HC + FF
Sbjct: 646 SGKVLIQWRHNYCASVAKRRYM-DVQRTRSL-HCELANLFF 684
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,396,947
Number of Sequences: 53049
Number of extensions: 297578
Number of successful extensions: 467
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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