Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31581
         (447 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1; ...    72   5e-12
UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1; ...    34   1.2  

>UniRef50_A4FSG8 Cluster: Putative uncharacterized protein; n=1;
           Thermobia domestica|Rep: Putative uncharacterized
           protein - Thermobia domestica (firebrat)
          Length = 53

 Score = 72.1 bits (169), Expect = 5e-12
 Identities = 34/53 (64%), Positives = 42/53 (79%)
 Frame = +3

Query: 258 LIKRKNYLRDNSVIFFFSSNKKKSLRPXCWIKIKFKCRSLKF*SVRSLKSYMI 416
           +I R +YLRDNSVIFF +S +++ LRP CWIKI  +CRSL + SVR LKSYMI
Sbjct: 1   MIVRLSYLRDNSVIFFENSYRQERLRPRCWIKILSRCRSLVYRSVRPLKSYMI 53


>UniRef50_A5Z1D8 Cluster: Putative uncharacterized protein; n=1;
           Haemaphysalis qinghaiensis|Rep: Putative uncharacterized
           protein - Haemaphysalis qinghaiensis
          Length = 30

 Score = 34.3 bits (75), Expect = 1.2
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +2

Query: 365 M*KFKILICSIIKILHDLSSNRXEPGW 445
           M K K  +CS  +ILHDLS +R E GW
Sbjct: 1   MKKLKKEVCSTFEILHDLSLDRCESGW 27


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 282,048,008
Number of Sequences: 1657284
Number of extensions: 3663474
Number of successful extensions: 4572
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4571
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23183027945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)