Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31578
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    73   1e-15
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    68   4e-14
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.6  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   8.6  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 73.3 bits (172), Expect = 1e-15
 Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
 Frame = +2

Query: 53  LSQNDVMSYFMEDVDLNTYMYYLHMNYPFWMTDDAYGINKERRGEIMMYANQQLLARMRL 232
           L +   ++Y+ ED+ LN + ++ H+ YPF    +   ++K RRGEI  Y +QQ++AR  +
Sbjct: 188 LDEEHRVAYWREDIGLNLHHWHWHLVYPFEGAREI--VDKNRRGEIFYYMHQQIIARFNI 245

Query: 233 ERLSHKMCD-VKPMMWNEPLETGYWPKI-RLPSGDEMPVRQNNMVV--ATKDNLKMKQMM 400
           ERL + +   VK   W EPL   Y+PK+  L +    P R  N V     ++  +++  +
Sbjct: 246 ERLCNGLKRVVKLSNWREPLPEAYFPKLDSLVASRTWPARPVNQVPRDLNREVDQIRLSL 305

Query: 401 DDVEM---MIREGILTGKIERRDGTVISLKKSEDIENLARL 514
           DD++     I + I +G +   +G  I L + E I+ L  +
Sbjct: 306 DDMDRWRDRIYDAIHSGVVRGDNGQNIPLTEFEGIDVLGNI 346


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 68.1 bits (159), Expect = 4e-14
 Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
 Frame = +2

Query: 53  LSQNDVMSYFMEDVDLNTYMYYLHMNYPFWMTDDAYGINKERRGEIMMYANQQLLARMRL 232
           L +   ++YF ED+ +N + ++ H+ YPF    +   + K RRGE+  Y +QQ++AR   
Sbjct: 188 LEEEHRLAYFREDLGINLHHWHWHLVYPFEAAREV--VAKNRRGELFYYMHQQIIARYNF 245

Query: 233 ERLSHKMCDVKPMM-WNEPLETGYWPKI-RLPSGDEMPVRQNNMVVATKDNLKMKQMMDD 406
           ERL +K+        +NE ++  Y+PK+  L S    P R  N  +    N ++ Q+  D
Sbjct: 246 ERLCNKLKRATRFNDFNEAIKEAYFPKLDSLVSSRAWPSRVANQKLRDL-NREVDQIKQD 304

Query: 407 VEMM------IREGILTGKIERRDGTVISLKKSEDIENLARL 514
           VE +      I   I  G +    G  I+L ++E I+ L  +
Sbjct: 305 VEDLKRWSDRIYAAIHQGSVTDERGRSITLTENEGIDILGNM 346


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 92  VDLNTYMYYLHMNYP 136
           V LN Y ++L + YP
Sbjct: 25  VPLNPYQFFLAVQYP 39


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -1

Query: 69  TSFWDKERRTP 37
           T+ WD E++TP
Sbjct: 316 TTVWDDEQKTP 326


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -3

Query: 382  EVIFRGNDHVVLADGHFITAGKTDFRPVT 296
            +V + GN   VL  G    AG    RP T
Sbjct: 937  KVSWEGNTERVLVPGDQTEAGVFTLRPAT 965


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.6 bits (41), Expect = 8.6
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 29  WRKGVRRSLSQND 67
           W+  +R SLS ND
Sbjct: 184 WQNSIRHSLSFND 196


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,281
Number of Sequences: 336
Number of extensions: 2284
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)