Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31578
         (516 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0640 - 10058828-10058971,10059066-10059201,10059512-100595...    28   3.9  
03_02_0482 + 8798931-8799024,8799118-8799253,8799435-8799506,879...    27   6.8  
06_03_1177 + 28174909-28175016,28176386-28176484,28177188-281772...    27   8.9  
01_05_0269 + 20258338-20258536,20258570-20258727,20258777-202588...    27   8.9  

>03_02_0640 -
           10058828-10058971,10059066-10059201,10059512-10059590,
           10060861-10060927,10061014-10061100,10061474-10061567,
           10061663-10061749,10062267-10062328,10062485-10062584,
           10062729-10062827,10062969-10063033,10063617-10063694,
           10063787-10063873,10064383-10064466,10064860-10064955,
           10065045-10065122,10066049-10066139,10066224-10066315,
           10066433-10066560,10067421-10067495,10067670-10067850
          Length = 669

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 13/61 (21%), Positives = 29/61 (47%)
 Frame = +2

Query: 158 YGINKERRGEIMMYANQQLLARMRLERLSHKMCDVKPMMWNEPLETGYWPKIRLPSGDEM 337
           + + +E  GE+ +    QL+   +    S K+    P++W + ++  Y P + +   +E 
Sbjct: 245 FSLEQECGGEVQILKEPQLILLRQNSWQSMKVRGSIPLLWEQIVDLSYKPCLNIIEHEET 304

Query: 338 P 340
           P
Sbjct: 305 P 305


>03_02_0482 +
           8798931-8799024,8799118-8799253,8799435-8799506,
           8799583-8799654,8799798-8799869,8800133-8800204,
           8800530-8800627,8800892-8801062,8801141-8801473,
           8802494-8802739,8802884-8803017,8803132-8803344
          Length = 570

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
 Frame = +2

Query: 308 KIRLPSGDEMPVRQNNMVVATKDNLKMKQMMDDVEMMIREGILT-GKIERRDGTVISLKK 484
           ++ L  G  + +   ++  +TK+ LK  + MDD  ++   G  T  K+   DG V +LK+
Sbjct: 257 RVELCGGSSIVMFHGDLPYSTKEILKKLETMDDENIIGVGGFGTVYKLAMDDGNVFALKR 316


>06_03_1177 +
           28174909-28175016,28176386-28176484,28177188-28177238,
           28177394-28177517,28177765-28177883,28177954-28178055,
           28178124-28178198,28178390-28178466,28178920-28179169,
           28179311-28179664,28179807-28179941,28180097-28180225
          Length = 540

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
 Frame = -3

Query: 490 LRLLQAYNSAVTTLDLSSKDTLSDHHFNIIXXXXXLEVIF-----RGNDHVVLADGHFIT 326
           LRLL  Y S + TLDL      +D H         +E+ F       N  ++++DG    
Sbjct: 349 LRLLTPYESKLFTLDLLKSMDPNDPHNKKNRGKLVVELTFDPFRDDSNSTILMSDGEGNV 408

Query: 325 AGKTDFRPVTGL 290
           + K D  P  GL
Sbjct: 409 SVKRDVPPSGGL 420


>01_05_0269 +
           20258338-20258536,20258570-20258727,20258777-20258899,
           20259176-20259310,20259380-20259479,20259572-20259945,
           20259994-20260143
          Length = 412

 Score = 27.1 bits (57), Expect = 8.9
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 278 NEPLETGYWPKIR-LPSGDEMPVRQNNMVVATKDNLKMKQMMDDVEMMIREGILTGKIER 454
           N PLETG    +R  P GD+ P++ N    + +D   M + +  +E++  E  +  + + 
Sbjct: 332 NTPLETGMIDNVRSTPGGDKGPIQTNR---SGEDQDLMDEDLRQLEVIAGEEKIQTRTDD 388

Query: 455 RDGTVISLKK 484
            +G   S  K
Sbjct: 389 AEGFTQSRTK 398


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,419,276
Number of Sequences: 37544
Number of extensions: 256057
Number of successful extensions: 579
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 579
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)