Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31578
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    32   0.28 
Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical pr...    28   4.6  
AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical...    28   4.6  
Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.28
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +2

Query: 23  IDWRKGVRRSLSQNDVMSYFMEDVDLNTYMYYLHM 127
           ++W++   + L  N+V     E VD ++YM YL M
Sbjct: 183 VEWKEAYEKKLEDNNVQGNLKEIVDQSSYMDYLRM 217


>Z80344-8|CAB02490.2| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 257 DVKPMMWNEPLETGYWPKIRLPSGD 331
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>AL117203-22|CAB60425.1| 2268|Caenorhabditis elegans Hypothetical
           protein F15D4.7 protein.
          Length = 2268

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 257 DVKPMMWNEPLETGYWPKIRLPSGD 331
           +  P++W EP  TG   KIR+P  D
Sbjct: 738 EADPIVWKEPAGTGSKMKIRVPPTD 762


>Z81481-3|CAB03949.1| 1496|Caenorhabditis elegans Hypothetical
           protein C38D9.3 protein.
          Length = 1496

 Score = 27.1 bits (57), Expect = 8.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 257 DVKPMMWNEPLETGYWPKIRLPSGD 331
           +  P++W EP  TG   KIR+P  D
Sbjct: 777 EADPIVWKEPAGTGSKFKIRVPPTD 801


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,849,526
Number of Sequences: 27780
Number of extensions: 202376
Number of successful extensions: 463
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 463
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)