Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31577
         (451 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    23   1.3  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.1  
DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    21   7.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.1  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    20   9.4  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 57  GFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFN 167
           GF+++     KIV +S +     GH +  L+G  IFN
Sbjct: 114 GFLLILTPNGKIVFVSHTVEHLLGHLQTDLMGQSIFN 150


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 382 VHNNSLPLSKSVRNCVPRSPSG 317
           ++NN++ L K + N   ++P+G
Sbjct: 203 INNNNIELYKEIFNGKRKNPNG 224


>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 240 QLTDISDDGYLTLMADNGDLREDLKIPDGD 329
           QLT ISD+   + + D   L   LK   G+
Sbjct: 26  QLTRISDEAIESTLNDRRYLLRQLKCATGE 55


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +3

Query: 171 KKYEDICPSTHNMDV 215
           K YED CP++++  V
Sbjct: 665 KVYEDYCPTSNSGSV 679


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -3

Query: 173 FTIEDINPNQVNFSVAVLSGFG 108
           FT+EDI+P      +    G G
Sbjct: 39  FTVEDIDPTLCTHLIYSFVGLG 60


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,517
Number of Sequences: 336
Number of extensions: 2592
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)