Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31571
(516 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i pr... 84 5e-17
AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4 ... 84 5e-17
U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated p... 77 1e-14
AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2 ... 77 1e-14
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 75 4e-14
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 75 4e-14
Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical pr... 66 1e-11
AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1 ... 66 1e-11
U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t prot... 40 0.001
U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t pro... 38 0.004
U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t pro... 38 0.004
AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t pr... 36 0.023
AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t pr... 36 0.023
U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t prot... 34 0.052
U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T prot... 33 0.092
U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle position... 33 0.092
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 31 0.65
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 29 2.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 29 2.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 29 2.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 29 2.6
AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical ... 29 2.6
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 28 3.4
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 27 6.0
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 27 6.0
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 27 6.0
AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical... 27 6.0
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 27 6.0
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 27 6.0
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 27 6.0
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 27 6.0
AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical ... 27 6.0
AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical ... 27 8.0
>AF039041-9|AAB94188.2| 194|Caenorhabditis elegans Troponin i
protein 4 protein.
Length = 194
Score = 84.2 bits (199), Expect = 5e-17
Identities = 50/134 (37%), Positives = 66/134 (49%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 11 KMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQE 70
Query: 293 XXXXXXXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS 472
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L
Sbjct: 71 RQRILQERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTI 128
Query: 473 QVNDLRGKFVKPTL 514
VNDLRGKFVKPTL
Sbjct: 129 AVNDLRGKFVKPTL 142
>AB107583-1|BAD89381.1| 194|Caenorhabditis elegans troponin I 4
protein.
Length = 194
Score = 84.2 bits (199), Expect = 5e-17
Identities = 50/134 (37%), Positives = 66/134 (49%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K AE +RK+ EVRKR+EEAS GF+TP
Sbjct: 11 KMAERERKKEEVRKRLEEASRMKKAKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQE 70
Query: 293 XXXXXXXXCGKPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS 472
++D NED ++ V + ER+ LE E +D+ YIV++KD EI++L
Sbjct: 71 RQRILQERIIPLPDLD--NEDDLEAVYDEIRERLIDLESENYDVSYIVRQKDFEINELTI 128
Query: 473 QVNDLRGKFVKPTL 514
VNDLRGKFVKPTL
Sbjct: 129 AVNDLRGKFVKPTL 142
>U40951-3|AAG01564.2| 242|Caenorhabditis elegans Uncoordinated
protein 27 protein.
Length = 242
Score = 76.6 bits (180), Expect = 1e-14
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K AE + K+AEVRKR+EEA GF+TP
Sbjct: 12 KAAEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQE 71
Query: 293 XXXXXXXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L
Sbjct: 72 RQKALADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLT 131
Query: 470 SQVNDLRGKFVKPTL 514
+VNDLRGKFVKP+L
Sbjct: 132 IEVNDLRGKFVKPSL 146
>AB107357-1|BAD89378.1| 242|Caenorhabditis elegans troponin I 2
protein.
Length = 242
Score = 76.6 bits (180), Expect = 1e-14
Identities = 43/135 (31%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K AE + K+AEVRKR+EEA GF+TP
Sbjct: 12 KAAEREAKKAEVRKRLEEAGNKKKAKKGFLTPERKKKLRKLLMVKAAEDLKRQQLLKEQE 71
Query: 293 XXXXXXXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
N+D ++ ++++ D R+ +LE+EK+D+ Y+V + + EI+ L
Sbjct: 72 RQKALADRTISLPNVDSIDDKGQLEKIYNDLWARLTQLEEEKYDINYVVSQTEAEINSLT 131
Query: 470 SQVNDLRGKFVKPTL 514
+VNDLRGKFVKP+L
Sbjct: 132 IEVNDLRGKFVKPSL 146
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K E + K+AEVRKRMEEA+ GF+TP
Sbjct: 24 KAQERELKKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQE 83
Query: 293 XXXXXXXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L
Sbjct: 84 RQKTLQQRTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLT 143
Query: 470 SQVNDLRGKFVKPTL 514
QVNDLRGKFVKPTL
Sbjct: 144 IQVNDLRGKFVKPTL 158
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 74.5 bits (175), Expect = 4e-14
Identities = 45/135 (33%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K E + K+AEVRKRMEEA+ GF+TP
Sbjct: 24 KAQERELKKAEVRKRMEEAAKKGSKKKGFLTPERKKKLRKLLMMKAAEDLKQQQMLKEQE 83
Query: 293 XXXXXXXXCGKPKNIDDANED-TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
++D N+ + ++ +D R+ LE+EKFD+ + V + + EI+ L
Sbjct: 84 RQKTLQQRTIPLPDVDSINDQGQLLKIYEDMFARVCALEEEKFDINFGVSQTEAEINQLT 143
Query: 470 SQVNDLRGKFVKPTL 514
QVNDLRGKFVKPTL
Sbjct: 144 IQVNDLRGKFVKPTL 158
>Z66562-5|CAA91466.1| 250|Caenorhabditis elegans Hypothetical
protein F42E11.4 protein.
Length = 250
Score = 66.1 bits (154), Expect = 1e-11
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K E + K+AEVRKR+EEA GF+TP
Sbjct: 25 KAQEREAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQE 83
Query: 293 XXXXXXXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN
Sbjct: 84 RVKVLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLN 143
Query: 470 SQVNDLRGKFVKPTL 514
+VNDLRGKFVKP+L
Sbjct: 144 IEVNDLRGKFVKPSL 158
>AB107358-1|BAD89379.1| 250|Caenorhabditis elegans troponin I 1
protein.
Length = 250
Score = 66.1 bits (154), Expect = 1e-11
Identities = 41/135 (30%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +2
Query: 113 KQAEIDRKRAEVRKRMEEASXXXXXXXGFMTPXXXXXXXXXXXXXXXXXXXXXXXXXXXX 292
K E + K+AEVRKR+EEA GF+TP
Sbjct: 25 KAQEREAKKAEVRKRLEEAGQKKQKK-GFLTPERKKKLRKLLMNKAAEDLKTQQLRKEQE 83
Query: 293 XXXXXXXXCGKPKNIDDANEDT-IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLN 469
N+D ++ ++ + D R+ LE+EK+D+ +I + I+ LN
Sbjct: 84 RVKVLAERTVALPNVDSIDDHAKLEAIYNDLFSRLCNLEEEKYDINHITTETETTINQLN 143
Query: 470 SQVNDLRGKFVKPTL 514
+VNDLRGKFVKP+L
Sbjct: 144 IEVNDLRGKFVKPSL 158
>U29082-3|AAT92083.1| 1178|Caenorhabditis elegans Troponin t protein
3, isoform b protein.
Length = 1178
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2
Query: 332 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 475
N + + +K K+ H+RI +LE EK+DLE +R++ ++ +LN +
Sbjct: 1043 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDMKELNER 1090
>U23523-11|AAP68942.2| 324|Caenorhabditis elegans Troponin t
protein 2, isoform b protein.
Length = 324
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 323 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 499
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 125 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 184
Query: 500 VKPTL 514
+K L
Sbjct: 185 LKKGL 189
>U23523-10|AAP68941.1| 428|Caenorhabditis elegans Troponin t
protein 2, isoform a protein.
Length = 428
Score = 37.9 bits (84), Expect = 0.004
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +2
Query: 323 KPKNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDL-RGKF 499
K +++ + +K K H RI +LE EK+DLE +R++ ++ +LN + + R K
Sbjct: 229 KAQDVSTLMPNDLKERIKGIHARIVKLEGEKYDLEKRRERQEYDLKELNERQRQVARNKA 288
Query: 500 VKPTL 514
+K L
Sbjct: 289 LKKGL 293
>AF039039-6|AAO25996.1| 308|Caenorhabditis elegans Troponin t
protein 4, isoform b protein.
Length = 308
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 359 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 475
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>AF039039-5|AAB94176.2| 347|Caenorhabditis elegans Troponin t
protein 4, isoform a protein.
Length = 347
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/39 (35%), Positives = 27/39 (69%)
Frame = +2
Query: 359 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQ 475
+K K+ H+RI +LE +K+DLE +R++ ++ +LN +
Sbjct: 216 MKAKIKELHQRICKLEAQKYDLEKRHERQEYDLKELNER 254
>U29082-2|AAT92082.1| 350|Caenorhabditis elegans Troponin t protein
3, isoform a protein.
Length = 350
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 332 NIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 466
N + + +K K+ H+RI +LE EK+DLE +R++ + L
Sbjct: 209 NASEVPQSELKAKIKELHQRICKLETEKYDLEKRHERQEYDPKQL 253
>U44759-1|AAA86906.1| 405|Caenorhabditis elegans troponin T
protein.
Length = 405
Score = 33.5 bits (73), Expect = 0.092
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 359 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTL 514
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>U43282-4|AAA83615.1| 405|Caenorhabditis elegans Muscle positioning
protein 2 protein.
Length = 405
Score = 33.5 bits (73), Expect = 0.092
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +2
Query: 359 IKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNS-QVNDLRGKFVKPTL 514
+K + H RI +LE EK+DLE +R+D ++ +L+ Q R K +K L
Sbjct: 232 LKERIRGLHARIVKLEAEKYDLEKRRERQDYDMKELHERQRQAARNKALKKGL 284
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 30.7 bits (66), Expect = 0.65
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 386 ERIARLEDEKFDLEYIVKRKDMEISDLNSQVND 484
E I L K + E ++K+KD+E+S + S++ D
Sbjct: 1074 ELIEELNRHKHEQEQVIKKKDIELSSIQSRLED 1106
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 511
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 511
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 511
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 446 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 505
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 338 DDA--NEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVKPT 511
DDA D + + E+ +L+ E ++ + K+ E +DL + ++DLRG F K T
Sbjct: 686 DDAARKNDALLEDVATWQEKYEQLKMELEEMNRRGQEKEREEADLRALLDDLRGNFDKLT 745
>AF022982-1|AAB69937.1| 224|Caenorhabditis elegans Hypothetical
protein T23B12.5 protein.
Length = 224
Score = 28.7 bits (61), Expect = 2.6
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = -1
Query: 504 LTNLPLRSLTWEFRSEISISFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLG 325
L NLPL + W F S S+ L + R + L+ L++SS+ ++FL
Sbjct: 39 LLNLPLERIFWNFLSLSSVPLQLFVVLR-QYMLTFSTSNKLQLLRITLVISSVFQTLFLT 97
Query: 324 L 322
L
Sbjct: 98 L 98
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 28.3 bits (60), Expect = 3.4
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 356 TIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVN 481
T KR+ + YH I L++ + Y +KRK + + + ++N
Sbjct: 200 TTKRLMEHYHIEIDNLKEAHSEEMYKIKRKYSTLEEYSEEIN 241
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 338 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 466
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1072 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1114
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 338 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 466
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 338 DDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDL 466
D+ E I+ V + + RLE+EK DLE ++ + E+S +
Sbjct: 1145 DELVEHKIREVNDRWKRELERLENEKDDLERRIRELEDELSQI 1187
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.5 bits (58), Expect = 6.0
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +2
Query: 329 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVNDLRGKFVK 505
+N+ +KRV K + + + D K DL IVK++ E + + KF+K
Sbjct: 200 RNLQTQGPQHLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQSVRDESAQAISKFIK 258
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEE 93
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEE 95
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEE 93
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEE 95
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEE 95
>AL110478-10|CAE17956.3| 758|Caenorhabditis elegans Hypothetical
protein Y26D4A.13 protein.
Length = 758
Score = 27.5 bits (58), Expect = 6.0
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 350 EDTIKRVCKDYHERIARLEDEKFDLEY 430
ED + R+C+ Y + + R+ + + +LEY
Sbjct: 671 EDVVNRLCESYKKLLVRVAELETELEY 697
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEE 93
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEE 95
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 67 PSSTSTPETPTETTISEAGDDEKRTEE 93
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +1
Query: 19 PSSNSCSRTP*TNTTTMADDEKKRLEE 99
PSS S TP T + A D++KR EE
Sbjct: 69 PSSTSTPETPTETTISEAGDDEKRTEE 95
>AL031620-5|CAA20926.1| 277|Caenorhabditis elegans Hypothetical
protein C18B12.5 protein.
Length = 277
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +2
Query: 329 KNIDDANEDTIKRVCKDYHERIARLEDEKFDLEYIVKRKDMEISDLNSQVND-LRGKFVK 505
KN N D K + D+H+ +++ + + LEYI +I + S+ N + GKF
Sbjct: 171 KNASILNLDC-KYLPADFHQHLSKFKHLEIKLEYISNEDIDKIKKMISEPNSIMNGKFKS 229
Query: 506 PT 511
T
Sbjct: 230 ST 231
>AF078788-2|AAC26964.1| 311|Caenorhabditis elegans Hypothetical
protein ZC190.5 protein.
Length = 311
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Frame = -1
Query: 489 LRSLTWEFRSEISI---SFLLTMYSRSNFXXXXXXXXXXXSLQTLLIVSSLASSMFLGL 322
LRS TWEF E + S + ++S + + +LI S+ S++FL L
Sbjct: 74 LRSKTWEFIHEFGVCLQSLSMLLFSMERYSAIRYPDFHASTTFVVLIYVSIVSAVFLAL 132
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,438,689
Number of Sequences: 27780
Number of extensions: 124474
Number of successful extensions: 615
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 560
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 615
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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