Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31568
         (516 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g48540.1 68418.m06001 33 kDa secretory protein-related contai...    30   0.80 
At2g35780.1 68415.m04390 serine carboxypeptidase S10 family prot...    28   3.2  
At5g49270.1 68418.m06098 phytochelatin synthetase-related contai...    27   7.5  
At5g22320.1 68418.m02604 leucine-rich repeat family protein cont...    27   9.9  
At1g61255.1 68414.m06903 expressed protein                             27   9.9  

>At5g48540.1 68418.m06001 33 kDa secretory protein-related contains
           Pfam PF01657: Domain of unknown function, duplicated in
           33 KDa secretory proteins
          Length = 263

 Score = 30.3 bits (65), Expect = 0.80
 Identities = 11/35 (31%), Positives = 24/35 (68%)
 Frame = +2

Query: 20  TMALKYFILITLICACVNAAKTTYKICVPSQHLKA 124
           T+ +K F+L+ L+C+C  AA + +++C  + ++ A
Sbjct: 3   TLVVKCFLLLALVCSC-RAADSIWQLCNTNSNISA 36


>At2g35780.1 68415.m04390 serine carboxypeptidase S10 family protein
           similar to Serine carboxypeptidase II chains A and B
           (SP:P08819) (EC 3.4.16.6) [Triticum aestivum (Wheat)];
          Length = 452

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 161 PWIWSEYPPCPDTLSGV 111
           PW+W  Y PC +  SG+
Sbjct: 297 PWMWRAYDPCTEKYSGM 313


>At5g49270.1 68418.m06098 phytochelatin synthetase-related contains
           Pfam PF04833: Phytochelatin synthetase-like conserved
           region
          Length = 663

 Score = 27.1 bits (57), Expect = 7.5
 Identities = 10/42 (23%), Positives = 25/42 (59%)
 Frame = +2

Query: 239 PVDPEDMYVAAKIPNQDFVVFQEYRTDEEPDAPFRYEAVIVI 364
           P+ P D+     + + DF++ ++   ++  D P+R+E+V+ +
Sbjct: 38  PISPSDLCNGIFL-SYDFILGRKIPPNDTADQPYRFESVLTV 78


>At5g22320.1 68418.m02604 leucine-rich repeat family protein
           contains leucine rich repeat (LRR) domains, Pfam:PF00560
          Length = 452

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +2

Query: 371 DLPINNLDQLKGLKSC 418
           DL  NNL  L+GLKSC
Sbjct: 47  DLRFNNLTDLQGLKSC 62


>At1g61255.1 68414.m06903 expressed protein
          Length = 143

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +1

Query: 115 PESVSGHGGYSDQIQGHTR 171
           PES S  G YSDQ++ H++
Sbjct: 26  PESSSSTGSYSDQLKKHSK 44


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,363,513
Number of Sequences: 28952
Number of extensions: 273408
Number of successful extensions: 614
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 614
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)