Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31567
         (516 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    32   0.003
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.23 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   3.7  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 32.3 bits (70), Expect = 0.003
 Identities = 14/46 (30%), Positives = 26/46 (56%)
 Frame = +2

Query: 296 TSARDPAXYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 433
           T+ RDP  Y+ +  I     E+K     YT+  L++ G+ +S+++V
Sbjct: 392 TAMRDPIFYRWHSYIDDIFQEYKATLPRYTENQLNYPGITVSNIEV 437


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.23
 Identities = 12/43 (27%), Positives = 23/43 (53%)
 Frame = +2

Query: 305 RDPAXYQLYKRIVQYIIEFKQYQVPYTQEALHFVGLKISDVKV 433
           RDP  ++ +  I     EFK     YT   L++ G+ +++++V
Sbjct: 395 RDPLFFRWHAYIDDMFQEFKATLPRYTVAQLNYPGVTVTNIEV 437


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 215 NARRVLGAGPKPFNQYTFI 271
           +A ++LG GPK    Y+F+
Sbjct: 11  DALKILGIGPKSNKIYSFL 29


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 373 LVLFKFDDVLNNPFIEL 323
           ++   FDD +NN  IEL
Sbjct: 194 MITITFDDAINNNNIEL 210


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +2

Query: 227 VLGAGPKPFNQYTFIPSALDFYQTSAR 307
           V  AGP    +YT  P  L +Y+   R
Sbjct: 886 VPSAGPGEAGEYTKQPGMLAYYEICNR 912



 Score = 21.0 bits (42), Expect = 6.5
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +3

Query: 300  RPGTQPXTSSIKGLFNTSSNLNSTRYHTHKKLFTS 404
            +PG +P TSS +     S    ST  H   K  TS
Sbjct: 1156 KPGHKPSTSSWQKPTKPSYRPPSTTNHWQTKTTTS 1190


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,267
Number of Sequences: 336
Number of extensions: 1835
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)