Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31567
         (516 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical...    28   3.4  
Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical pr...    28   4.6  
L12018-8|AAA65464.1|  129|Caenorhabditis elegans Fmrf-like pepti...    28   4.6  

>AF022981-11|AAG24207.1|  746|Caenorhabditis elegans Hypothetical
           protein W03F9.4 protein.
          Length = 746

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
 Frame = +2

Query: 170 FEEDFLQFYQRSYXVNARRVLGAG-----PKPFNQYTFIPSALDFYQTSARDPAXYQLYK 334
           F+ED    Y R Y   AR + G G      KP + Y F  +   F   +   P    +Y 
Sbjct: 401 FDEDDSTKYGREY---ARALHGDGYMLWCDKP-SVYIFSKNGR-FSSNAEHSPCDAMIYV 455

Query: 335 RIVQYIIEFKQYQVPYTQEALHFVGLKISDVKVDKMVTFFDHFDFDAFNTVY 490
           ++ +YI   +Q++ PY  +  H VG      K +++    D    DA +  +
Sbjct: 456 QVREYIKYHEQFESPYGPDG-HCVGSIEHVPKAERLCWDMDKETLDAIDEAF 506


>Z83125-7|CAB05619.1|  407|Caenorhabditis elegans Hypothetical
           protein T15D6.9 protein.
          Length = 407

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 14/36 (38%), Positives = 22/36 (61%)
 Frame = +2

Query: 377 PYTQEALHFVGLKISDVKVDKMVTFFDHFDFDAFNT 484
           P+ +  LH  GL +S   +DK+    ++F+F AFNT
Sbjct: 120 PHHKYILH--GLNLSAAYIDKLPRNDENFEFRAFNT 153


>L12018-8|AAA65464.1|  129|Caenorhabditis elegans Fmrf-like
          peptide protein 23 protein.
          Length = 129

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +1

Query: 1  QREGTTKKFASSTFMRRHSXNTWQQGAL 84
          QR+ ++K F SS + RR S N+   GAL
Sbjct: 14 QRDASSKNFNSSIYSRRSSRNSGCPGAL 41


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,022,468
Number of Sequences: 27780
Number of extensions: 182314
Number of successful extensions: 528
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)