Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31564
(473 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 186 6e-48
SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0) 61 5e-10
SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 60 9e-10
SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 6e-09
SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 54 8e-08
SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 51 6e-07
SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 49 2e-06
SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25) 49 2e-06
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 47 9e-06
SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 47 9e-06
SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0) 46 1e-05
SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38) 45 3e-05
SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 45 3e-05
SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 45 4e-05
SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 6e-05
SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18) 44 9e-05
SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 44 9e-05
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19) 42 2e-04
SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 42 2e-04
SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 42 3e-04
SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 42 3e-04
SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23) 42 3e-04
SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 5e-04
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 41 6e-04
SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 41 6e-04
SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 8e-04
SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 40 0.001
SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07) 40 0.001
SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 40 0.001
SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.004
SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.010
SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 36 0.013
SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19) 36 0.017
SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.023
SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 35 0.030
SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 35 0.030
SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.030
SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14) 35 0.040
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 35 0.040
SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013) 33 0.092
SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.12
SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.16
SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.21
SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13) 32 0.21
SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.28
SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.37
SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.49
SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58) 31 0.49
SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65
SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.85
SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027) 30 0.85
SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 30 1.1
SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21) 29 1.5
SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11) 29 1.5
SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1) 29 1.5
SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021) 29 2.0
SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13) 29 2.0
SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.0
SB_13859| Best HMM Match : Exonuc_VII_S (HMM E-Value=5.7) 29 2.6
SB_12122| Best HMM Match : DUF573 (HMM E-Value=0.74) 29 2.6
SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24) 28 3.4
SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.4
SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_40383| Best HMM Match : IQ (HMM E-Value=0.00047) 28 4.5
SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.5
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.0
SB_51389| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7) 27 7.9
SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029) 27 7.9
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.9
SB_13434| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.52) 27 7.9
>SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 718
Score = 186 bits (454), Expect = 6e-48
Identities = 87/155 (56%), Positives = 119/155 (76%)
Frame = +2
Query: 5 RKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGF 184
+K R +++G + K FTNVYVKNFG+D DE +K++ + G+I S KVM +G S+GFGF
Sbjct: 94 KKERIEKMGTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGF 153
Query: 185 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGV 364
V+FE P+ AE A LNGKE + G+ L+ GRA+K+AER E+K + E+ + ER+ R+QGV
Sbjct: 154 VSFETPEEAEEAVNVLNGKE-IGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGV 212
Query: 365 NLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
NLY+KNLDD IDDERLR+EF+P+GTI+SAKVM +D
Sbjct: 213 NLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDD 247
Score = 93.5 bits (222), Expect = 8e-20
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 2/100 (2%)
Frame = +2
Query: 17 EKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVA 190
EK+ E+ F N+Y+KN + DE L++ F YG I+S KVM D GNS+GFGFV
Sbjct: 199 EKKRQERINRFQGVNLYIKNLDDPIDDERLREEFSPYGTISSAKVMKDDKGNSKGFGFVC 258
Query: 191 FEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKEL 310
F P+ A +A E+NG+ L+ KPLYV AQ++ ER+ +L
Sbjct: 259 FSSPEEATKAVTEMNGRILI-SKPLYVALAQRREERKAQL 297
>SB_45423| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 514
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/83 (34%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 226
T +YV + + ++ M+K +FE +G + S +++Y + N S+G+GFV F + +AA+RA
Sbjct: 242 TRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAME 301
Query: 227 ELNGKELVEGKPLYVGRAQKKAE 295
++NG EL G+PL +G ++ +
Sbjct: 302 QMNGFELA-GRPLKIGPVTERGD 323
Score = 47.2 bits (107), Expect = 7e-06
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGF 178
P E+ EK + V+ + L++ F K G+++ +++ ++ S+G
Sbjct: 132 PEPMTEESAEEKDQ--RTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGI 189
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 358
++ F D A A I L+G++L+ G P+ V Q + R L + E+LK
Sbjct: 190 AYIEFTDKSAVPLA-IGLSGQKLL-GAPIMVMLTQAEKNR---LAAEAERLKQP----LG 240
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
LYV +L I + ++ F PFGT+ S +++ +
Sbjct: 241 PTRLYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYD 276
>SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28)
Length = 419
Score = 60.1 bits (139), Expect = 9e-10
Identities = 34/110 (30%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
TN+Y++N ++ + ML++MF KYG++ S +++ D NS+G GF E + E+ +
Sbjct: 179 TNLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFARMESAEKCEQVIKD 238
Query: 230 LNGKELVEG--KPLYVGRAQ-KKAERQKELKRKFEQLKSERLTRYQGVNL 370
N K+++ G + L V A +RQ + KR +Q++ + Y NL
Sbjct: 239 FN-KKMLPGCIQELVVKFADGGPKKRQGQAKRYTKQMEDHIVNFYGSENL 287
Score = 52.4 bits (120), Expect = 2e-07
Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +2
Query: 23 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFED 199
+ GE+ TN+Y++ + +D+ L + KYG I S K ++ KD +G+GFV FE
Sbjct: 91 DTGEEKLSKTNLYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFES 150
Query: 200 PDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVK 379
P +A++A L K + Q ++ ++ EQ NLY++
Sbjct: 151 PISAQKAVAALVNKGI-----------------QAQMAKQQEQ---------DPTNLYIQ 184
Query: 380 NLDDTIDDERLRKEFAPFGTITSAKVM 460
NL D+ L F+ +G + S +++
Sbjct: 185 NLPQNCDEAMLENMFSKYGKVISTRIL 211
>SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 57.2 bits (132), Expect = 6e-09
Identities = 41/138 (29%), Positives = 65/138 (47%), Gaps = 1/138 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 226
TN+ + S E +K +F G +TS K++ + G S G+ FV +++PD A +A
Sbjct: 27 TNLIINYVPPSMSQEDIKKIFGTVGNVTSCKLIRDRATGQSLGYAFVNYDNPDDANKAVR 86
Query: 227 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
E+NG L + K LK F + S T + NLY+ L + +E
Sbjct: 87 EMNGARL----------------QNKTLKVSFARPSS---TEIKNANLYISGLPKDMKEE 127
Query: 407 RLRKEFAPFGTITSAKVM 460
+ F PFG I ++KV+
Sbjct: 128 EVEALFKPFGKIITSKVL 145
Score = 48.4 bits (110), Expect = 3e-06
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+Y+ +D +E ++ +F+ +G+I + KV+ G RG GFV F+ A+ A +L
Sbjct: 114 NLYISGLPKDMKEEEVEALFKPFGKIITSKVLKDVSGEGRGTGFVRFDKRCEAQTAIDDL 173
Query: 233 NGKEL 247
N K L
Sbjct: 174 NNKTL 178
>SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33)
Length = 392
Score = 53.6 bits (123), Expect = 8e-08
Identities = 32/115 (27%), Positives = 61/115 (53%), Gaps = 1/115 (0%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVA 190
+++ G + +V+V N + S+E LK++F + G + S ++++ ++ G +G+GF
Sbjct: 13 QKQSSGAADRSLRSVFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCE 72
Query: 191 FEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 355
++D + A A LNG EL G+ L V A +E+ KE + E ++ Y
Sbjct: 73 YKDQETALSAMRNLNGYEL-NGRALRVDSA--ASEKNKEEIKSMEMTARPEVSPY 124
>SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15)
Length = 145
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+++F D L+ +F YG I ++ G S+GFG+V +E+ ++A+RA L
Sbjct: 65 IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQTGKSKGFGYVTYENAESAQRA---LA 121
Query: 236 GKELVEGK 259
G +++GK
Sbjct: 122 GTHIIDGK 129
>SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 50.0 bits (114), Expect = 1e-06
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGF 178
P ++ E E + T + V +D +D+ + MFE + + K++ +K G S GF
Sbjct: 31 PALTQQPEPQEAQESKTTLIVNYIPQDMTDQTFRMMFEAVASLNNCKIVRHKPSGWSYGF 90
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 358
GFV + + A++A +LNG +G K LK F + + +
Sbjct: 91 GFVDYNTTEDAQKAIDKLNG--------FTIG--------NKVLKVAFSRPGGDNT---K 131
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVM 460
G NLYV N+ + + RK F +G I + +++
Sbjct: 132 GANLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLL 165
Score = 35.9 bits (79), Expect = 0.017
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
N+YV N + + + FE YG I + +++ K G +G GFV ++ A+ A
Sbjct: 134 NLYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISS 193
Query: 230 LNG 238
L+G
Sbjct: 194 LSG 196
Score = 34.3 bits (75), Expect = 0.052
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGNSRGFGFVAFEDPDAAERACIEL 232
+YV N G D + E + +F + G + +M+ +GF FV + A+ A L
Sbjct: 277 LYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQTL 336
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQL 331
NG + KPL R + R + K + L
Sbjct: 337 NG-FMYTNKPLQSSRIRTLNRRSRLFKLHYINL 368
>SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 382
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDD-GNSRGFGFVAFEDPDAAERACI 226
N+++ N + +++L D F +G I + K+M D GNS+GF F+ F DA++ A
Sbjct: 101 NLFIGNLDTEVDEKLLYDTFSAFGVILQTPKIMRDSDTGNSKGFAFINFASFDASDAAIE 160
Query: 227 ELNGKELVEGKPLYVGRAQKKAER 298
+NG+ L +P+ V A KK +
Sbjct: 161 AMNGQYLC-NRPITVSYAFKKESK 183
Score = 41.5 bits (93), Expect = 3e-04
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
+YV E S+ ++ ++F + G + + H + +G+GFV F + A+ A I++
Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYA-IKV 73
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
V GKP+ R K + K L G NL++ NLD +D++ L
Sbjct: 74 MNMIKVYGKPI---RVNKASAHNKNLD--------------VGANLFIGNLDTEVDEKLL 116
Query: 413 RKEFAPFGTITSAKVMLED 469
F+ FG I ++ D
Sbjct: 117 YDTFSAFGVILQTPKIMRD 135
>SB_28395| Best HMM Match : RRM_1 (HMM E-Value=3.9e-25)
Length = 159
Score = 48.8 bits (111), Expect = 2e-06
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 59 YVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNG 238
Y+ N ++ L++ F + + ++ G RGFGFV F + E+A E +G
Sbjct: 8 YIGNLSYSVDEQALEEKFHGCDVVDVKVITDRETGRPRGFGFVTFGSKEEMEKAIDEFDG 67
Query: 239 KELVEGKPLYVGRAQKKAER 298
++ +G+P+ V +AQ + ER
Sbjct: 68 QDF-DGRPMKVNQAQPRGER 86
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 46.8 bits (106), Expect = 9e-06
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 20 KELGEKAKLFTN--VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAF 193
+E+ E K+ + V++ ED ++ +L ++F K+G + ++ + G SR GFV F
Sbjct: 512 QEVNEGFKMAASFPVWIGGLSEDVTENVLLELFNKFGPVKDVVILRDESGKSRQSGFVHF 571
Query: 194 EDPDAAERACIELNGKELV 250
D AE A + +NG +++
Sbjct: 572 WSSDVAEAANVGMNGCDIL 590
>SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 593
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Frame = +2
Query: 20 KELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAF 193
++ ++AK + +Y+ + D ++ +K +FE +G++ H + K+ G +G+GF+ +
Sbjct: 189 EQFEQEAKKYARIYIASVHPDLLEDDIKSVFEAFGKVV-HCSLSKEPMTGKHKGYGFIEY 247
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRA 280
E+ +A A +N +L G+ L VGRA
Sbjct: 248 ENQQSANDAIASMNLFDL-GGQFLRVGRA 275
Score = 45.2 bits (102), Expect = 3e-05
Identities = 33/142 (23%), Positives = 69/142 (48%), Gaps = 1/142 (0%)
Frame = +2
Query: 44 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERA 220
L VYV + + +E ++ F +G I + + + +GF FV ++ P+AA+ A
Sbjct: 100 LMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFAFVEYDLPEAAQLA 159
Query: 221 CIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 400
++NG L+ G+ + VGR + L +FEQ ++++ R +Y+ ++ +
Sbjct: 160 LEQMNG-VLLGGRNIKVGR-PSNVPQAAPLIEQFEQ-EAKKYAR-----IYIASVHPDLL 211
Query: 401 DERLRKEFAPFGTITSAKVMLE 466
++ ++ F FG + + E
Sbjct: 212 EDDIKSVFEAFGKVVHCSLSKE 233
>SB_50249| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 420
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 42/77 (54%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
+V+V +E LKD FE++G + S ++M G SR +GFV F+D ++ L
Sbjct: 81 SVFVGGLASGTDEEGLKDYFEQFGEVESVRIMRTFLGYSRNYGFVLFKDDGPSKEV---L 137
Query: 233 NGKELVEGKPLYVGRAQ 283
++ GK + VG+++
Sbjct: 138 KKSHVINGKTVDVGKSR 154
>SB_37500| Best HMM Match : RRM_1 (HMM E-Value=7.3e-38)
Length = 496
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +2
Query: 23 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDP 202
++ E KL +++ + ++E LKD F ++G I +M K DG SRGFGFV +E
Sbjct: 42 KMSESEKL-RKIFIGGLNWNTTEEGLKDYFSQWGTIVDCVIM-KRDGRSRGFGFVTYESS 99
Query: 203 DA 208
D+
Sbjct: 100 DS 101
Score = 27.1 bits (57), Expect = 7.9
Identities = 19/79 (24%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +2
Query: 239 KELVEGKPLYVGR-AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 415
+ L K +Y +Q+K + R F L S+ + +++ L+ +E L+
Sbjct: 8 RRLTSSKIIYPESCSQRKPFQCFSASRPFALLPSKMSESEKLRKIFIGGLNWNTTEEGLK 67
Query: 416 KEFAPFGTITSAKVMLEDG 472
F+ +GTI +M DG
Sbjct: 68 DYFSQWGTIVDCVIMKRDG 86
>SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 268
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/101 (24%), Positives = 50/101 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++VK F + ++ L+ FE+YG + K++ G S+G+ F+ FE + A+ +
Sbjct: 10 IFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFESQEVAD-GLRDNK 68
Query: 236 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQ 358
G + + K L +G+A ++ + + R F R +Q
Sbjct: 69 GLDF-KDKVLSIGQAVRR-KSSRSYSRHFHWQSGHRQDLFQ 107
>SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0)
Length = 1026
Score = 44.8 bits (101), Expect = 4e-05
Identities = 29/109 (26%), Positives = 56/109 (51%), Gaps = 6/109 (5%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR---GFGF 184
++K K + + ++N + ++ +LK+ F +G ++ V K G GFGF
Sbjct: 235 KDKSSSPKGSKKSRLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGF 294
Query: 185 VAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKA---ERQKELKRKF 322
V F + A +A E+N K+++ G+P+ V A K+ E Q++ K+ +
Sbjct: 295 VQFTNVFDAAKALEEMNAKKIL-GRPVAVDWAVPKSMYTENQEKHKKDY 342
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRI-TSHKVMYKDDGN-SRGFGFVAFEDPDAAERAC 223
T ++V+N + +D K FE+ G + V KD+ N RGFG+V F + A +A
Sbjct: 20 TTIFVRNLPYNITDAEFKSAFEEIGPLKRGFIVKDKDNQNRCRGFGYVTFALEEDALKAK 79
Query: 224 IELNGKELVEGKPLYVGRAQKKA 292
+ ++G+P+++ ++KKA
Sbjct: 80 DNIKS---IKGRPIHLDFSEKKA 99
>SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 364
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +2
Query: 152 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER 298
++ G RGFGFV F D ++A + +G++L +G+P+ V +AQ + ER
Sbjct: 44 RETGRPRGFGFVTFGSEDEMDKAIDKFDGEDL-DGRPMKVNKAQPRGER 91
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/92 (27%), Positives = 46/92 (50%)
Frame = +2
Query: 23 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDP 202
++GE+ K Y+ N ++ L+D F +Y + + ++ RGF FV F
Sbjct: 225 KMGEECKC----YIGNLDFKVNEADLQDRFSRYDVVDVQVISDRETQRPRGFAFVTFGSK 280
Query: 203 DAAERACIELNGKELVEGKPLYVGRAQKKAER 298
E A EL+G+E +G+ + V +A+ + +R
Sbjct: 281 KNMEDAINELDGQEF-DGRSMKVNQARSREQR 311
>SB_15297| Best HMM Match : RRM_1 (HMM E-Value=2.2e-18)
Length = 291
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Frame = +2
Query: 47 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERA 220
FT ++V + D+ L+ F ++G I V+ KD S+G+GFV DAAE A
Sbjct: 9 FTKLFVGGIPYESGDDALRKFFAQFGEIRE-AVVIKDRVTKKSKGYGFVTMATSDAAELA 67
Query: 221 CIELNGKELVEGKPLYVGRA 280
C N + ++EG+ V A
Sbjct: 68 C--KNKRPMIEGRQANVNLA 85
>SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16)
Length = 842
Score = 43.6 bits (98), Expect = 9e-05
Identities = 29/87 (33%), Positives = 46/87 (52%), Gaps = 6/87 (6%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAE----RACIELNGKELV 250
S E L+ FEK+G + VM SRGFGF+ F+DP A + EL+GK++V
Sbjct: 120 SAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGKKMV 179
Query: 251 -EGKPLYVGRAQKKAERQKELKRKFEQ 328
K +++G ++++K+ F Q
Sbjct: 180 TTTKKIFIGGLSTNTS-EEDMKKYFSQ 205
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 42.7 bits (96), Expect = 1e-04
Identities = 24/82 (29%), Positives = 45/82 (54%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+++ V+N D + + L FE G + + ++ G SRGFGFV ++D + A++ E
Sbjct: 289 SSLIVRNLSYDTTTDSLGAAFE--GCSNAKVIFDRESGESRGFGFVDYDDVETAKKVLSE 346
Query: 230 LNGKELVEGKPLYVGRAQKKAE 295
+ G E V+G+ + + A + E
Sbjct: 347 MAGAE-VDGRQVRLDFASPRTE 367
Score = 42.3 bits (95), Expect = 2e-04
Identities = 27/87 (31%), Positives = 46/87 (52%)
Frame = +2
Query: 38 AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAER 217
AK +V++ N D +E L FE+ G + +V+ ++ G SRGFG+ F + +
Sbjct: 176 AKEEMSVFLGNLSFDADEETLAAFFEEKGLSATCRVITQE-GRSRGFGYADFTSKEDYNK 234
Query: 218 ACIELNGKELVEGKPLYVGRAQKKAER 298
A +ELNG++ G+ + + A K R
Sbjct: 235 A-LELNGEDCC-GREIRINPANSKPSR 259
>SB_35697| Best HMM Match : RRM_1 (HMM E-Value=1.3e-19)
Length = 168
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/68 (32%), Positives = 35/68 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
V+V D ++ L +FE G I ++M +G +RG+ FV + D A+R LN
Sbjct: 76 VFVGKIPRDLYEDELVPVFETAGPIYEVRLMMDFNGQNRGYAFVVYTSKDDAKRCVKTLN 135
Query: 236 GKELVEGK 259
E+ +GK
Sbjct: 136 NYEIRKGK 143
>SB_52029| Best HMM Match : RRM_1 (HMM E-Value=1e-18)
Length = 462
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/68 (33%), Positives = 36/68 (52%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+ V+V N + + LKD F+ G + ++M D+ S+G G V FE P A A
Sbjct: 185 STVFVTNLDYKVNWQKLKDTFKCAGHVIRAEIMEDDEKKSKGMGTVQFETPMEAMNAVNL 244
Query: 230 LNGKELVE 253
L+GK L++
Sbjct: 245 LHGKMLMD 252
>SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23)
Length = 201
Score = 41.9 bits (94), Expect = 3e-04
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T +YV N G + L+ FEK+GR++ V N GF FV +ED AE A E
Sbjct: 4 TKLYVGNLGRNADSSELERAFEKFGRLSKVWVA----RNPPGFAFVEYEDYRDAEEAVRE 59
Query: 230 LNGKELVE 253
L+G + +
Sbjct: 60 LDGANVCD 67
>SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 610
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +2
Query: 41 KLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAER 217
K+ + V++ D ++ L +FE+ G I ++M G ++GF F F + D A+
Sbjct: 149 KVCSQVFIGKVPRDCFEDELIPVFEECGHIYDFRLMIDPISGLTKGFAFCTFSNKDEAQN 208
Query: 218 ACIELNGKELVEGKPLYV 271
A +L+ KE+ GK L V
Sbjct: 209 AVKKLDNKEIRPGKRLGV 226
Score = 36.7 bits (81), Expect = 0.010
Identities = 24/82 (29%), Positives = 44/82 (53%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
P++ + + +K K+ VY++N ++E LK+ + +YG + K + KD +
Sbjct: 316 PQEEPDDDAMKKVKV---VYLRNLSPSITEEKLKEEYSQYGAVDRVKKL-KD------YA 365
Query: 182 FVAFEDPDAAERACIELNGKEL 247
FV F + D A +A E +GKE+
Sbjct: 366 FVHFTERDHALKAIEETDGKEM 387
>SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0)
Length = 672
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 232
++ + G + +DE L F KY K++ K S+G+GFV+F+DP+ +A E+
Sbjct: 219 IFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPNDFIKAMREM 278
Query: 233 N 235
N
Sbjct: 279 N 279
>SB_37198| Best HMM Match : RRM_1 (HMM E-Value=7.8e-23)
Length = 362
Score = 41.5 bits (93), Expect = 3e-04
Identities = 19/67 (28%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 226
+N+++ + ++F+D L F+ +G + S KV N S+ FGFV++++ +A+ A
Sbjct: 277 SNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQ 336
Query: 227 ELNGKEL 247
+NG ++
Sbjct: 337 HMNGFQI 343
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L + F PFGT+ SAKV ++
Sbjct: 276 GSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFID 311
>SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 41.5 bits (93), Expect = 3e-04
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN---------SRGFGFVAFEDPDA 208
VY N + + LK +FE + ++ K+ N SRGFGFV F +P+
Sbjct: 52 VYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPED 111
Query: 209 AERACIELNGKELVEGKPLYV 271
A+ A LNGKE V+G+ L +
Sbjct: 112 AQTAVKSLNGKE-VQGRTLKI 131
>SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 215
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 226
+ VYV N ++ L +FE+YG++ ++ K+ SRG F+ F D +A+ A
Sbjct: 10 STVYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVA 69
Query: 227 ELNGKEL 247
+N K++
Sbjct: 70 AVNKKQM 76
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACI 226
T +YV + + + + ++++F YGR+ + + N SRGF +V + DP+ E+A
Sbjct: 1157 TKLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALK 1216
Query: 227 ELNGKELVEGKPLYV 271
++G + ++G+ + V
Sbjct: 1217 HMDGGQ-IDGQEIAV 1230
>SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39)
Length = 507
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/63 (39%), Positives = 32/63 (50%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV N +D ++ L D+F KYG I + + G F FV FEDP AE A +
Sbjct: 263 VYVGNLPQDVREKDLHDIFYKYGHIADVDLKNR-RGAGPPFAFVEFEDPRDAEDAVKGRD 321
Query: 236 GKE 244
G E
Sbjct: 322 GHE 324
>SB_17244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 299
Score = 40.3 bits (90), Expect = 8e-04
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 232
++V + ++E L++ FE YG +T V+ SRGFG+V F D +
Sbjct: 16 LFVGGLNRETTNETLREYFEAYGELTDVVVICDSATKKSRGFGYVTFADYKVTRNVLKDK 75
Query: 233 --NGKELVEGKPLYVGRA 280
NG ++GK + V RA
Sbjct: 76 VENGAHRIDGKEVEVKRA 93
>SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N D + ++++F K+G + +++ G +G+G+V +E +A A + L+
Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232
Query: 236 GKELVEGKPLYVGRAQKKAER 298
E V+G+ + V + R
Sbjct: 233 KTE-VKGRTISVALSNPPTRR 252
>SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24)
Length = 407
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/84 (27%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
+V++ N D +E L+++F G + S +++ + G +GFG+V FE DA A ++
Sbjct: 57 SVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKGFGYVLFESKDAVVFA-LK 115
Query: 230 LNGKELVEGKPLYVGRAQKKAERQ 301
+N E +G+ + V ++ K + +
Sbjct: 116 MNNAEF-KGRKIRVFPSKDKPQTE 138
>SB_1160| Best HMM Match : RRM_1 (HMM E-Value=1.5e-07)
Length = 252
Score = 39.5 bits (88), Expect = 0.001
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2
Query: 152 KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAE 295
++ G RGFGFV F + E+A E +G++L +G+P+ V A+ + +
Sbjct: 131 RETGRPRGFGFVTFGSKEEMEKAIDEFDGQDL-DGRPMKVNEAKPRGD 177
>SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11)
Length = 67
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/65 (33%), Positives = 34/65 (52%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VY+ ++ +K F YGR +++ KD G+GFV F+ D AE A E N
Sbjct: 5 VYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-----GYGFVEFDYSDDAEDAVYECN 59
Query: 236 GKELV 250
GK+++
Sbjct: 60 GKKML 64
>SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 39.5 bits (88), Expect = 0.001
Identities = 26/102 (25%), Positives = 49/102 (48%)
Frame = +2
Query: 167 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 346
S+GFGFV+F + A +A E++ + GK + A +K + ++ + +
Sbjct: 553 SKGFGFVSFVRREDAAKAIAEMD-SVTIGGKQVKTNWAARKNNPTQTKPLVWDDVFHQ-- 609
Query: 347 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG 472
+ +YV NL + D L++ F+ +G+I KV + G
Sbjct: 610 SSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFADKG 651
Score = 34.3 bits (75), Expect = 0.052
Identities = 21/52 (40%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG----NSRG 175
+ ++L T VYV N D D L+ MF +YG I KV + D G N+RG
Sbjct: 609 QSSQLNTTVYVGNLPPDVKDYELQQMFSQYGSILETKV-FADKGYAFINARG 659
Score = 31.5 bits (68), Expect = 0.37
Identities = 27/132 (20%), Positives = 56/132 (42%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
++YV N + E++ +F K ++ K M + + FV FE A+ A +
Sbjct: 370 SLYVGNLDPKCTQELICSIFNKIAKVVRCK-MINSPTDKGPYCFVEFETHADAQEAKFRM 428
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
+ + +++ K ++ + F +++V +L + +D+ L
Sbjct: 429 DQRTVMDKKLKVNWATNHPGMKRGDTNNHF--------------HIFVGDLAENVDNALL 474
Query: 413 RKEFAPFGTITS 448
RK F PFG I++
Sbjct: 475 RKTFEPFGEISA 486
>SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 291
Score = 38.7 bits (86), Expect = 0.002
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+ N + + ++ FE++G + K+ G SRGFGFV + D A IE
Sbjct: 11 LYIGNLNFNSDEGEIEQAFEEFGVEKVDILRDKESGRSRGFGFVLLQSADQIAPA-IEKM 69
Query: 236 GKELVEGKPLYVGRAQKKAERQ 301
+ V G+ + V A K E +
Sbjct: 70 NQSSVGGRNITVALALDKTENR 91
>SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDE-MLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIE 229
++V DF + ++K++F + G +T +V +G SRGF FV + + AE+
Sbjct: 207 LFVDRLPRDFKNGGLIKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRA 266
Query: 230 LNGKELVEGKPLYV 271
NG++ VEG + V
Sbjct: 267 HNGRQ-VEGSNIRV 279
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 232
++V N +F++ D+ YG I ++ + G+S+G+GFV + + A +A +L
Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174
Query: 233 --NGKELVEGKPLYVGRAQ 283
+ + G+ L V A+
Sbjct: 175 LNTASKYIGGRILRVAFAE 193
>SB_53239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 520
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMY----KDDGNSRGFGFVAFEDPDAAERACIELNGKELV 250
++EML +F KYG + S K+M+ ++ +R GFVA+ ++A L GK+++
Sbjct: 218 NEEMLMRLFGKYGPLASVKIMWPRTEEEKSRNRNCGFVAYMRRKDGDKAIKHLTGKDIM 276
>SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0)
Length = 298
Score = 36.3 bits (80), Expect = 0.013
Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = +2
Query: 59 YVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIELN 235
YV E+ +++L F +G IT ++ M RGFGFV FE + A +N
Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67
Query: 236 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDT 394
EL G+ + V A K + KE + + L ++ G L K+ +T
Sbjct: 68 ESELF-GRTIRVNLA--KPMKIKEGYSRAVWSEDSWLQKHAGQTLEEKDSTET 117
>SB_23824| Best HMM Match : RRM_1 (HMM E-Value=1.9e-19)
Length = 623
Score = 35.9 bits (79), Expect = 0.017
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 11/147 (7%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T + KN + E L+ +F +G++ +V+ G + + +P A +A +
Sbjct: 424 TVIVAKNLPYGTNAEELRTLFSAFGQLG--RVILPPSGIT---ALIEIPEPSLARKAFQK 478
Query: 230 L------NGKELVEGKPLYV---GRAQKKA--ERQKELKRKFEQLKSERLTRYQGVNLYV 376
L N +E PL V G+ +K + + K+ + EQ +GV L+V
Sbjct: 479 LAYSKFKNSPLYLEWAPLDVFVEGQLKKDSLEKTDKDADQSEEQNAGSDEEDTEGVTLFV 538
Query: 377 KNLDDTIDDERLRKEFAPFGTITSAKV 457
KNL +E L+++FA G + SA +
Sbjct: 539 KNLSFESTEEALKQKFAAVGPVKSATI 565
>SB_53070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 347
Score = 35.5 bits (78), Expect = 0.023
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L + F PFGT+ SAKV ++
Sbjct: 228 GSNLFIYHLPQEFTDADLMQTFQPFGTVISAKVFID 263
Score = 31.9 bits (69), Expect = 0.28
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 98 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKEL 247
L F+ +G + S KV N S+ FGFV++++ +A+ A +NG ++
Sbjct: 278 LMQTFQPFGTVISAKVFIDKQTNMSKCFGFVSYDNVMSAQNAIQHMNGFQI 328
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 407 RLRKEFAPFGTITSAKVMLE 466
RL + F PFGT+ SAKV ++
Sbjct: 277 RLMQTFQPFGTVISAKVFID 296
>SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 35.5 bits (78), Expect = 0.023
Identities = 22/64 (34%), Positives = 32/64 (50%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+ VY+ N G++ S ++ FE +G + V N GF F FED AE A E
Sbjct: 2 SRVYIGNIGDNASKREIEREFETFGPLRDVWVAR----NPPGFAFCVFEDRRDAEDAVRE 57
Query: 230 LNGK 241
L+G+
Sbjct: 58 LDGR 61
>SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16)
Length = 76
Score = 35.1 bits (77), Expect = 0.030
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
++YV+N S+ LK +F KYG+I KV R +GFV F ++A +A +
Sbjct: 3 SIYVRNVPLPMSETQLKAVFTKYGQI--EKVR-----KIRDYGFVYFAKRESAVQAIDGI 55
Query: 233 NGKELVEGKPLYVGRAQKKAER 298
NG ++G L V A ++ R
Sbjct: 56 NG-AYIDGCKLEVSLAIPQSSR 76
>SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35)
Length = 929
Score = 35.1 bits (77), Expect = 0.030
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR-GFGFVAFEDPDAAERACIE 229
+V V+N S + LKD F KYG++T Y D R G G V FE D A +
Sbjct: 799 SVIVENLSSRTSWQDLKDYFRKYGKVT-----YADAHKKRIGEGVVEFESKDDLNTAIEK 853
Query: 230 LNGKEL 247
L+ EL
Sbjct: 854 LDDTEL 859
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 152 KDDGNSRGFGFVAFEDPDAAERACIELNGKELV 250
+D RG+GFV F+D AE A +LNG++L+
Sbjct: 716 RDISLKRGYGFVEFDDHRDAEDAVHDLNGRDLI 748
>SB_21838| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 949
Score = 35.1 bits (77), Expect = 0.030
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 89 DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL-VEGKPL 265
D++L++++ +++ G +RGFGFV F+ P+AA+ L G L V G +
Sbjct: 345 DDVLQELYAAEVAFRDVRIVRNKIGYTRGFGFVEFDTPEAAKEWMDYLKGGPLKVLGYNI 404
Query: 266 YVGRAQKKAERQKE 307
V ++ K ++K+
Sbjct: 405 GVEYSRPKEGQEKD 418
>SB_56343| Best HMM Match : RRM_1 (HMM E-Value=3.2e-14)
Length = 273
Score = 34.7 bits (76), Expect = 0.040
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERAC---- 223
++V N D + E + D F G + + K D +S+G GF+ +D +A
Sbjct: 76 LFVGNLPFDLTTEKVLDHFRCAGSSSFRLLTKKTDNSSKGCGFLEIDDSIGYTKALNLHH 135
Query: 224 IELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
L G+++ VE G + K+ E+ +E K+KF++ ++ +
Sbjct: 136 SYLGGRKINVEVTCGGGGSSDKRKEKLQEKKKKFKKKRAAK 176
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 34.7 bits (76), Expect = 0.040
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VY+ +++ ++ F YGR+ +D +GFV FED A+ A E N
Sbjct: 5 VYLGRLPYGTTEDDVRRFFRSYGRL-------RDINLKNNYGFVEFEDDRDADDAVYECN 57
Query: 236 GKELV 250
GKE++
Sbjct: 58 GKEML 62
>SB_35971| Best HMM Match : RRM_1 (HMM E-Value=0.013)
Length = 665
Score = 33.5 bits (73), Expect = 0.092
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 170 RGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 289
RGFGFV FE ++A++AC L+ K + V +AQ K
Sbjct: 12 RGFGFVTFESENSADKACD--TQYHLINNKKVEVKKAQPK 49
>SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 33.1 bits (72), Expect = 0.12
Identities = 21/64 (32%), Positives = 32/64 (50%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T VY+ + G++ S +++ F YG + V N GF F F+D AE A E
Sbjct: 32 TKVYIGSLGDNASKREIENEFGYYGPLKDVWVAR----NPPGFAFCIFDDRRDAEDAVRE 87
Query: 230 LNGK 241
L+G+
Sbjct: 88 LDGR 91
>SB_43406| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 32.7 bits (71), Expect = 0.16
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +2
Query: 20 KELGEK--AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAF 193
KE+ +K A V+V G ++E+LK+ F G + +V ++ +R GFV F
Sbjct: 98 KEIAKKLIASGGKTVFVSGIG--LTEEILKEEFNHLGHV--ERVNFE---KNRSQGFVTF 150
Query: 194 EDPDAAERACIELNG 238
+ +AA++A E+NG
Sbjct: 151 DTWEAADKAIDEMNG 165
>SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 435
Score = 32.3 bits (70), Expect = 0.21
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKP 262
++ +K+ F ++G I +V + + SRGFGFV F+ + A+ L+ ++G+
Sbjct: 127 TESEMKEYFTRFGEIDFCEVKLDPNTRRSRGFGFVRFKKDEDAKNV---LSTSHRIQGRL 183
Query: 263 LYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTI 442
V R + E K+ F E T + + + + D + K F FG +
Sbjct: 184 CEV-RLPRPKEELNVPKKLFVGRLPESTTEKTLMEYFAQ--FGEVTDVYIPKPFRHFGFV 240
Query: 443 TSAKV 457
T A V
Sbjct: 241 TFASV 245
>SB_12089| Best HMM Match : RRM_1 (HMM E-Value=7.4e-13)
Length = 260
Score = 32.3 bits (70), Expect = 0.21
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSR----------------GFGFV 187
++V N F D L+ MF +G I +++Y + G+ GFGFV
Sbjct: 70 LHVTNIPFRFRDNDLRQMFGSFGVIADVEIIYNERGSKHAVRFPTRPNPLNLRIEGFGFV 129
Query: 188 AFEDPDAAERACIELNGKELVEGKPLYVGRAQKKA 292
F A +A +LNG +V+G+ + V +++
Sbjct: 130 TFNTAAEANKAREKLNG-TIVDGRKVEVSLCMEQS 163
>SB_37668| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 31.9 bits (69), Expect = 0.28
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +2
Query: 92 EMLKDMFEKYGRITSHKV-MYKD-DGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
E +++M +K ++ K+ +YK DG+S+G V +EDP A A NGK+ + G+ +
Sbjct: 192 EEVEEMIDK--KLQKPKIWIYKHPDGSSKGECTVTYEDPPTASAAIEWFNGKDFM-GQSI 248
Query: 266 YVGRAQKKAER 298
V A+ + +
Sbjct: 249 KVELAEARTPK 259
>SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 618
Score = 31.5 bits (68), Expect = 0.37
Identities = 20/92 (21%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +2
Query: 62 VKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGK 241
VKN ++E+L+ F ++G + V+ G S+G G V F + A A +++
Sbjct: 130 VKNLDNLVTNELLEQAFSQFGDVERAVVVCDVRGRSKGHGIVEFSRKNNAHNAMQKISES 189
Query: 242 ELVEG---KPLYVGRAQKKAERQKELKRKFEQ 328
+ G +P+ V + +++ + +++ E+
Sbjct: 190 LFLLGRTPRPISVEQYEQEDDEDGLVEKSVER 221
Score = 29.9 bits (64), Expect = 1.1
Identities = 33/129 (25%), Positives = 55/129 (42%)
Frame = +2
Query: 80 DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 259
D +E +K+MF+KYG + + +GFGF+ + AE A L+
Sbjct: 62 DCDEEEMKEMFKKYGEVAEVFI-----NKEKGFGFIRLDTRLHAEAAKAGLD-------- 108
Query: 260 PLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGT 439
A +K + L+ +F L VKNLD+ + +E L + F+ FG
Sbjct: 109 -----MATRKG---RTLRVRFAT---------HAAALRVKNLDNLVTNELLEQAFSQFGD 151
Query: 440 ITSAKVMLE 466
+ A V+ +
Sbjct: 152 VERAVVVCD 160
>SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 31.1 bits (67), Expect = 0.49
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T VY D + L+ YGR+ ++ G+GFV F+D A+ +
Sbjct: 5 TRVYFGRLPRDCRERDLEKFVRGYGRV-------REISMKLGYGFVEFDDYRDADDCVYD 57
Query: 230 LNGKELV 250
LNG+ L+
Sbjct: 58 LNGRNLL 64
>SB_51317| Best HMM Match : E-MAP-115 (HMM E-Value=0.58)
Length = 696
Score = 31.1 bits (67), Expect = 0.49
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 10/145 (6%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVA-F 193
+KE A ++ VK+F + S KD EK R+T K +S A
Sbjct: 530 DKEANTVAIFDVSLRVKHFKKRLSLHQQKDFEEKIRRLTERDSQRKGQVDSLKRQLDAET 589
Query: 194 EDPDAAERACI----ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK----SERLT 349
D D ++ EL K LV+ + + + + AER +E +R+ +Q K R T
Sbjct: 590 RDKDKWQQQYYTVQEELMKKSLVDEQLSGLDKMARAAERMEEAERRNQQRKPSSQQARDT 649
Query: 350 RYQGVNLYVKNLDDTI-DDERLRKE 421
+NL +LD+ + DD + E
Sbjct: 650 ACSILNLTSNDLDEMMRDDNTMENE 674
>SB_39433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1291
Score = 30.7 bits (66), Expect = 0.65
Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDD--GNSRGFGFVAFEDPDAAERACIE 229
+++ +++ +K++ +G + + ++ KD G S+G+ F + D + A
Sbjct: 675 IFIGGLPNYLNEDQVKELLSSFGELRAFNLV-KDSATGLSKGYAFCEYVDLGITDVAIQG 733
Query: 230 LNGKELVEGKPLYVGRAQKKAER 298
LNG +L + K L V RA A++
Sbjct: 734 LNGMQLGD-KKLIVQRASVGAKQ 755
>SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 781
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +2
Query: 77 EDFSDEMLKDMFEKYGRITSHKVM--YKDDGNSRGFGFVAFEDPDAAERA 220
+DF+DE L+ FE +G I +++ +K N +G+G+V F A A
Sbjct: 62 KDFNDEDLRSKFESFGDIEYVQIVRDHKTREN-KGYGYVKFHKSSTAAMA 110
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 161 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQ 283
G S+GF +V + +A A +LNG E G L V A+
Sbjct: 240 GESKGFAYVTYNSVGSAIYAKEKLNGFEYPPGNKLVVKFAE 280
>SB_45079| Best HMM Match : RRM_1 (HMM E-Value=0.0027)
Length = 253
Score = 30.3 bits (65), Expect = 0.85
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
++V + + F +++ ++ EKYG I V + G +V F + AE+A +
Sbjct: 72 SDVEAQEHYDRFFEDVFLELEEKYGEIEEMNVCDNLGDHLVGNVYVKFRYEEDAEKAVND 131
Query: 230 LNGKELVEGKPLY 268
LN + G+P+Y
Sbjct: 132 LNNR-WYNGQPIY 143
>SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERA 220
T++ V N + E LK +F+KYG + + ++ SRGF FV F + AE A
Sbjct: 16 TSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDAEDA 73
>SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035)
Length = 258
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +2
Query: 167 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 286
SRGFGFV E+ + E + +G E EG+ L V A K
Sbjct: 82 SRGFGFVTLENQEDLEDVTRKFDGFE-YEGRRLKVAEASK 120
>SB_52510| Best HMM Match : RRM_1 (HMM E-Value=8.1e-21)
Length = 304
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDD--GNSRGFGFVAFEDPDAAERACIE 229
+ V N E+ + L+++F G I S + KD S+GF F+ F + A RA
Sbjct: 183 IRVTNLSEETRESDLQELFRPLGPI-SRIFLAKDKFTNQSKGFAFINFVHREDAARAIEV 241
Query: 230 LNG 238
L+G
Sbjct: 242 LSG 244
>SB_1157| Best HMM Match : RRM_1 (HMM E-Value=1.2e-11)
Length = 248
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/46 (26%), Positives = 21/46 (45%)
Frame = +2
Query: 59 YVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFE 196
Y+ N ++ L++ F + + ++ G RGFGFV E
Sbjct: 85 YIGNLSYSVDEQALEEKFHDCNVVDVRVITDRETGRPRGFGFVTLE 130
>SB_3721| Best HMM Match : RRM_1 (HMM E-Value=3.1)
Length = 51
Score = 29.5 bits (63), Expect = 1.5
Identities = 13/51 (25%), Positives = 30/51 (58%)
Frame = +2
Query: 161 GNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELK 313
G S+G+ +V F + ++ +A + ++ +E +EG+P+++ KA+ K
Sbjct: 3 GRSKGYAYVEFNN-ESTVQAALAMD-REKMEGRPMFISPCVDKAKNPTTFK 51
>SB_3226| Best HMM Match : RNA_pol_Rpb2_1 (HMM E-Value=0.021)
Length = 1217
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 239 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRK 418
K+ E K + + A+K+ + +KE K K E+ + ER R Y + + + +R R+
Sbjct: 747 KDRKERKKIEMEEAKKREQEEKERKEKEEKERIEREEREAKEREYAERIAKQNEIDRKRR 806
Query: 419 E 421
E
Sbjct: 807 E 807
>SB_33046| Best HMM Match : RRM_1 (HMM E-Value=3.6e-13)
Length = 1463
Score = 29.1 bits (62), Expect = 2.0
Identities = 22/91 (24%), Positives = 44/91 (48%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+ ++V + + + + L+ +FE++G ITS ++ RG ++ E + A RA +
Sbjct: 541 STIWVGHLAKIVTQDTLQGIFEEHGTITSIDLI-----PPRGCAYIQMEKREDAYRALDK 595
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKF 322
L +L G + + A K + +E K F
Sbjct: 596 LRNIKLY-GNSVKLAWAPAKGVKDREYKEFF 625
>SB_26185| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 29.1 bits (62), Expect = 2.0
Identities = 26/86 (30%), Positives = 38/86 (44%)
Frame = +2
Query: 164 NSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
N+ FGF + DP+A+ RA I L V K L V K E K K ++ +
Sbjct: 84 NAGSFGFCEYSDPEASLRA-IRLLHNLQVGDKSLVVKVDAKTKTLLDEYKAKKKEDRKGE 142
Query: 344 LTRYQGVNLYVKNLDDTIDDERLRKE 421
R G + DD +DD L+++
Sbjct: 143 KKREDG----EADDDDDLDDATLKED 164
>SB_13859| Best HMM Match : Exonuc_VII_S (HMM E-Value=5.7)
Length = 198
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 293 ERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
E ++ELK K E+LK E+L Q V + + DD DD+
Sbjct: 35 EEKEELKSKCEKLKEEKLKMEQVVWWWDEYGDDDDDDD 72
>SB_12122| Best HMM Match : DUF573 (HMM E-Value=0.74)
Length = 67
Score = 28.7 bits (61), Expect = 2.6
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 278 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTID 400
A++K K K K+ Q+K+ T++ YVKN+ D
Sbjct: 18 ARRKTSLIKNFKTKYRQIKNRLNTKFSRSIRYVKNIGKAFD 58
>SB_48651| Best HMM Match : ABC_tran (HMM E-Value=2.1e-24)
Length = 569
Score = 28.3 bits (60), Expect = 3.4
Identities = 21/73 (28%), Positives = 31/73 (42%)
Frame = -3
Query: 222 QALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSNISFNISSEKSSPKFFTYTLVNS 43
QAL A+ SS +T P P EL +Y+ + V+ + I + FF T+V S
Sbjct: 458 QALLASRNSSNSTGPPPQELNQDMYLAVYSVLA-----LGLIILAMTRIQLFFKLTMVGS 512
Query: 42 LAFSPSSFSRXLR 4
F +R
Sbjct: 513 RVLHSRMFDALIR 525
>SB_11300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1148
Score = 28.3 bits (60), Expect = 3.4
Identities = 22/111 (19%), Positives = 49/111 (44%), Gaps = 7/111 (6%)
Frame = +2
Query: 32 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAA 211
EK + V++ E ++ ++ ++F G ITS ++ N+R F + F ++
Sbjct: 345 EKPEGCRTVFIGGLPESINEHIINEIFYVCGEITSIRISKGKGENARKFCHLRFGAKESV 404
Query: 212 ERAC------IELNGKEL-VEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+ A + G+ + +E ++V A + ++Q + Q + ER
Sbjct: 405 DTAVLFSGYRLYTRGENMAIESSRIFVDYAASRDDQQDYERELRAQAREER 455
>SB_23536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 143 VMY-KDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRA 280
V+Y ++ SR FG+V F D A A ++ G E +GK ++ GRA
Sbjct: 7 VVYDRETRRSRNFGYVTFRDEQDAADAMKQMGG-ESGKGKEIF-GRA 51
>SB_40383| Best HMM Match : IQ (HMM E-Value=0.00047)
Length = 841
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 275 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 421
R +++AE K QL+ ERL + V + + +T RLR+E
Sbjct: 580 RDRERAESASSKSEKVAQLREERLQSRERVQAFKTDYQETTLRRRLREE 628
>SB_1431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1748
Score = 27.9 bits (59), Expect = 4.5
Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +2
Query: 281 QKKAERQKELKRKFEQLKSERLTRYQGVNLY-VKNLDDTIDDERLRKEFA 427
Q +E KEL +QL+ + +YQG +LY KN T+ + R A
Sbjct: 552 QDLSETNKELASYIDQLERSQNLQYQGKSLYKAKNKQRTLKEFLSRANLA 601
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 27.5 bits (58), Expect = 6.0
Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVE--GK 259
++E LK++ + I +++G F E CI+ GK++ G
Sbjct: 888 AEEKLKEIHKMLDDIGKLSPSSEEEGEEEKVEFGKTEKSKEDGEKCIDELGKDITSWLGT 947
Query: 260 PLY-VGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDD 391
V RA+K+ +R + + + +T + + YV+ +DD
Sbjct: 948 VFVDVHRAKKELKRTNSEQNRLKNRLDVVITEREALRKYVREVDD 992
>SB_51389| Best HMM Match : Lac_bphage_repr (HMM E-Value=1.7)
Length = 343
Score = 27.1 bits (57), Expect = 7.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 281 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEF 424
Q +E KEL +QL+ + +YQG K+L D + +R KEF
Sbjct: 16 QDLSETNKELASYIDQLERSQNLQYQG-----KSLHDAKNKQRTLKEF 58
>SB_20689| Best HMM Match : Gelsolin (HMM E-Value=0.00029)
Length = 1866
Score = 27.1 bits (57), Expect = 7.9
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQ-KELKRKFEQLKSERLTRYQGVNL 370
E D + E+ KE +E + R + K ER+ KE KR+ +QL+ E+ + + + +
Sbjct: 889 EKKDNEKARLKEMKDKEKIEKEK----REKDKREREEKERKRRQQQLEKEKKEKEKKLLI 944
Query: 371 YVKNLDDTIDDERLRKE 421
+ + ERLR++
Sbjct: 945 EKEKREKEKQKERLREK 961
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 27.1 bits (57), Expect = 7.9
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +2
Query: 275 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 454
R +KK +QK+ KRK + +K++ + + V+ D +++ K+ A G +K
Sbjct: 151 RQEKKIRKQKQEKRKRKTVKADFNSSEEEVSSQKTKASSRKDQKKMNKQMANKGKGAKSK 210
>SB_13434| Best HMM Match : C4dic_mal_tran (HMM E-Value=0.52)
Length = 835
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 62 VKNFGEDFSDEMLKDMFEKYGRIT 133
++ +D D+ LK F KYGRIT
Sbjct: 212 LRGIAQDTKDKQLKLTFTKYGRIT 235
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,742,991
Number of Sequences: 59808
Number of extensions: 207153
Number of successful extensions: 876
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 994359969
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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