Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31564
         (473 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   5.4  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   5.4  
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    23   7.2  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           22   9.5  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 16/60 (26%), Positives = 29/60 (48%)
 Frame = -3

Query: 270 T*RGLPSTSSLPFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSNISFNIS 91
           T   L + S +  +S   +    G  ++  P P  +P+S+ I    V+ P+ + I FN+S
Sbjct: 458 TPENLINLSDISVSSETVVQVLFGLKRSFTPGPDGIPASVLINCKDVLAPHLAKI-FNLS 516


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +2

Query: 206  AAERACI-ELNGKELVEGKPLYVGRAQKKAERQK 304
            A +RA + ELN K++++ K  Y G+  K   +Q+
Sbjct: 1156 ARDRANMPELNMKQILDYKAAYFGKLPKHQHQQQ 1189


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 239 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSE 340
           KEL + +P Y    +K+ E  +EL  K EQ + E
Sbjct: 342 KELEQVRPRYEAMRRKEEECSRELNLK-EQKRKE 374


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 14/54 (25%), Positives = 23/54 (42%)
 Frame = +2

Query: 86  SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKEL 247
           +D  L+ + +   R  S+     D     G  +V++EDPD A      +  K L
Sbjct: 355 ADAPLRKVGDPTKRFGSYAFRLPDSNGEHGV-WVSYEDPDTAGNKAGYVKAKNL 407


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = -3

Query: 255 PSTSSLPFNSMQALSAASGSSKATKPKPLELPSSLYIT 142
           PS  + P   M   ++ SGS  AT P    L  + Y++
Sbjct: 346 PSMGNDPQTGMGGPASMSGSLSATSPVSPHLQQNGYVS 383


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 400,799
Number of Sequences: 2352
Number of extensions: 7249
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)