Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31564
(473 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 175 1e-44
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 175 1e-44
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 175 1e-44
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 175 1e-44
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 171 2e-43
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 60 8e-10
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 60 1e-09
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 60 1e-09
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 56 1e-08
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 54 4e-08
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 54 4e-08
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 53 9e-08
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 53 9e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 53 9e-08
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 53 9e-08
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 53 9e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 52 2e-07
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 52 2e-07
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 52 2e-07
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 51 4e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 51 4e-07
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 51 5e-07
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 50 6e-07
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 9e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 5e-06
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 48 5e-06
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 48 5e-06
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 46 1e-05
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 46 1e-05
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 46 1e-05
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 46 1e-05
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 46 1e-05
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 46 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 45 2e-05
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 45 2e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 4e-05
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 44 4e-05
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 6e-05
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 44 6e-05
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 44 6e-05
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 44 6e-05
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 7e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 42 3e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 41 4e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 41 5e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 41 5e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 40 7e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 40 7e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 40 0.001
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 40 0.001
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 40 0.001
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 39 0.002
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 39 0.002
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 39 0.002
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 39 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 39 0.002
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 39 0.002
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 39 0.002
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 39 0.002
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 38 0.003
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.003
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.003
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 37 0.006
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 37 0.009
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 37 0.009
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 36 0.020
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 35 0.026
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.045
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 34 0.060
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 34 0.060
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 34 0.060
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 33 0.10
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 33 0.10
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 32 0.18
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 32 0.18
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 32 0.18
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 32 0.24
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 31 0.32
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ... 31 0.32
Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical pr... 31 0.42
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.56
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 31 0.56
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 30 0.98
Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 28 3.0
AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical ... 28 3.0
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical pr... 27 5.2
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 27 5.2
U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical p... 27 5.2
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 27 5.2
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 27 5.2
AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear recep... 27 5.2
AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical ... 27 5.2
AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine r... 27 5.2
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 27 5.2
Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical pr... 27 6.9
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 27 6.9
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 27 6.9
AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High inciden... 27 6.9
AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical ... 27 6.9
Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical pr... 27 9.1
U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine rece... 27 9.1
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 175 bits (427), Expect = 1e-44
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G ITS +VM + G S+GFG
Sbjct: 137 PRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFG 195
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 196 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 254
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM ++
Sbjct: 255 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE 292
Score = 95.5 bits (227), Expect = 2e-20
Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Frame = +2
Query: 5 RKXREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 178
+K E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 240 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 299
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 346
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 300 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 355
Score = 58.0 bits (134), Expect = 3e-09
Identities = 52/159 (32%), Positives = 81/159 (50%), Gaps = 19/159 (11%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERACI 226
++YV + D ++ +L + F G + S +V +D+ S G+ +V F+ P AERA
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVC-RDNATRLSLGYAYVNFQQPADAERAMD 91
Query: 227 ELNGKELVEGKPLYVGRAQKK-AERQ--------KELKRKFE---QLKSERL-----TRY 355
+N E + GKP+ + +Q+ A R+ K L + F Q +++R T
Sbjct: 92 TMNF-EALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAK 150
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLEDG 472
Q N+YVKN D + E L K FA FG ITS +VM +G
Sbjct: 151 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEG 189
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 175 bits (427), Expect = 1e-44
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G ITS +VM + G S+GFG
Sbjct: 134 PRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFG 192
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 193 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 251
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM ++
Sbjct: 252 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE 289
Score = 98.3 bits (234), Expect = 2e-21
Identities = 55/140 (39%), Positives = 81/140 (57%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 58 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 117
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 118 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 166
Query: 413 RKEFAPFGTITSAKVMLEDG 472
K FA FG ITS +VM +G
Sbjct: 167 EKLFAKFGNITSCEVMTVEG 186
Score = 95.5 bits (227), Expect = 2e-20
Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Frame = +2
Query: 5 RKXREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 178
+K E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 237 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 296
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 346
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 297 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 352
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 175 bits (427), Expect = 1e-44
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G ITS +VM + G S+GFG
Sbjct: 197 PRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFG 255
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 256 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 314
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM ++
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE 352
Score = 98.3 bits (234), Expect = 2e-21
Identities = 55/140 (39%), Positives = 81/140 (57%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 413 RKEFAPFGTITSAKVMLEDG 472
K FA FG ITS +VM +G
Sbjct: 230 EKLFAKFGNITSCEVMTVEG 249
Score = 95.5 bits (227), Expect = 2e-20
Identities = 51/117 (43%), Positives = 73/117 (62%), Gaps = 3/117 (2%)
Frame = +2
Query: 5 RKXREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 178
+K E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKF-EQLKSERL 346
GFV FE P+ A A E+N K +V KPLYV AQ+K +R+ +L ++ ++L S R+
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIAQRKEDRRAQLASQYMQRLASMRM 415
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 175 bits (426), Expect = 1e-44
Identities = 89/158 (56%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R +ELGE AK FTNVYVKNFG+ ++ E L+ +F K+G ITS +VM + G S+GFG
Sbjct: 197 PRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE-GKSKGFG 255
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPL--YVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF +P+ AE A L+ +EG L +V RAQKK+ER ELK+K EQ K+ER+ +Y
Sbjct: 256 FVAFANPEEAETAVQALHDST-IEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKY 314
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKNLD+T+DD+ L+K+F +G ITSAKVM ++
Sbjct: 315 QGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE 352
Score = 98.7 bits (235), Expect = 2e-21
Identities = 55/140 (39%), Positives = 81/140 (57%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+++KN + ++ + D F +G I S KV +DG S+G+GFV FE +AA+ A ++
Sbjct: 121 NIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKV 180
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
NG L+ GK ++VG+ Q +A+R +EL T Q N+YVKN D + E L
Sbjct: 181 NGM-LLAGKKVFVGKFQPRAQRNRELGE----------TAKQFTNVYVKNFGDHYNKETL 229
Query: 413 RKEFAPFGTITSAKVMLEDG 472
K FA FG ITS +VM +G
Sbjct: 230 EKVFAKFGNITSCEVMTVEG 249
Score = 93.5 bits (222), Expect = 7e-20
Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 2/110 (1%)
Frame = +2
Query: 5 RKXREKELGEKAKLF--TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGF 178
+K E+ E+ + + N+YVKN E D+ LK FE YG ITS KVM ++G S+GF
Sbjct: 300 KKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGF 359
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 328
GFV FE P+ A A E+N K +V KPLYV Q+K +R+ +L ++ Q
Sbjct: 360 GFVCFEKPEEATSAVTEMNSK-MVCSKPLYVAIGQRKEDRRAQLASQYMQ 408
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 171 bits (417), Expect = 2e-43
Identities = 89/158 (56%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R KELGE +TNV+VKNFGE E L MF K+G ITS VM G +GFG
Sbjct: 222 PRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFG 281
Query: 182 FVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RY
Sbjct: 282 FVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRY 340
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+++
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE 378
Score = 93.5 bits (222), Expect = 7e-20
Identities = 53/138 (38%), Positives = 80/138 (57%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 413 RKEFAPFGTITSAKVMLE 466
F+ FG ITSA VM +
Sbjct: 255 SAMFSKFGEITSAVVMTD 272
Score = 93.1 bits (221), Expect = 9e-20
Identities = 43/92 (46%), Positives = 62/92 (67%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+YVKN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 328
N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 404 NSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 53.2 bits (122), Expect = 9e-08
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
++Y+ + D S+ ML + F G + S +V + S G+ +V F+ P AERA
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
+N E++ G+P+ + +Q+ + R N+++KNLD ID++
Sbjct: 118 MNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNIFIKNLDRVIDNKS 160
Query: 410 LRKEFAPFGTITSAKVMLED 469
+ F+ FG I S KV +D
Sbjct: 161 VYDTFSLFGNILSCKVATDD 180
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 171 bits (417), Expect = 2e-43
Identities = 89/158 (56%), Positives = 110/158 (69%), Gaps = 2/158 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
PR R KELGE +TNV+VKNFGE E L MF K+G ITS VM G +GFG
Sbjct: 222 PRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFG 281
Query: 182 FVAFEDPDAAERACIELNGKELVEGKP--LYVGRAQKKAERQKELKRKFEQLKSERLTRY 355
FVAF D DAA +A +LN ++EG L V RAQKK+ER ELKRK+E LK ER+ RY
Sbjct: 282 FVAFADQDAAGQAVEKLNDS-ILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRY 340
Query: 356 QGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
QGVNLYVKN+++ ++D+ LR F+ FGTITSAKVM+++
Sbjct: 341 QGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE 378
Score = 93.5 bits (222), Expect = 7e-20
Identities = 53/138 (38%), Positives = 80/138 (57%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+++KN ++ + D F +G I S KV D+GNS+G+GFV FE +A+ A ++
Sbjct: 146 NIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKV 205
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
NG L+ K +YVG+ Q +A+R KEL E +Y N++VKN + +D E+L
Sbjct: 206 NGM-LLSDKKVYVGKFQPRAQRMKEL--------GESGLKY--TNVFVKNFGEHLDQEKL 254
Query: 413 RKEFAPFGTITSAKVMLE 466
F+ FG ITSA VM +
Sbjct: 255 SAMFSKFGEITSAVVMTD 272
Score = 93.1 bits (221), Expect = 9e-20
Identities = 43/92 (46%), Positives = 62/92 (67%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N+YVKN ED +D+ L+D F +G ITS KVM ++G S+GFGFV FE P+ A A ++
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 328
N K ++ KPLYV AQ+K +R+ +L ++ Q
Sbjct: 404 NSK-MIGAKPLYVALAQRKEDRRAQLASQYMQ 434
Score = 53.2 bits (122), Expect = 9e-08
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 1/140 (0%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
++Y+ + D S+ ML + F G + S +V + S G+ +V F+ P AERA
Sbjct: 58 SLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDT 117
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
+N E++ G+P+ + +Q+ + R N+++KNLD ID++
Sbjct: 118 MNF-EVIHGRPMRIMWSQRDPAAR----------------RAGNGNIFIKNLDRVIDNKS 160
Query: 410 LRKEFAPFGTITSAKVMLED 469
+ F+ FG I S KV +D
Sbjct: 161 VYDTFSLFGNILSCKVATDD 180
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 68.9 bits (161), Expect = 2e-12
Identities = 41/136 (30%), Positives = 72/136 (52%), Gaps = 1/136 (0%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYK-DDGNSRGFGFVAFEDPDAAERACIE 229
+V+V + +D S+E+LK F K+G ++ KV+ S+G+GFV+F + AE A
Sbjct: 136 HVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAG 195
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
+NGK + + A+K +E ++ K FEQ+ + T+ ++YV N+ D
Sbjct: 196 MNGKWIGKRAVRTNWAARKNSEENRD-KLTFEQVFNS--TKADNTSVYVGNISQQTTDAD 252
Query: 410 LRKEFAPFGTITSAKV 457
LR F+ +G I ++
Sbjct: 253 LRDLFSTYGDIAEVRI 268
Score = 46.4 bits (105), Expect = 1e-05
Identities = 22/66 (33%), Positives = 38/66 (57%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T+VYV N + +D L+D+F YG I ++ ++ + FV +E + A +A +E
Sbjct: 237 TSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF-----KTQRYAFVRYEKKECATKAIME 291
Query: 230 LNGKEL 247
+NGKE+
Sbjct: 292 MNGKEM 297
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 60.1 bits (139), Expect = 8e-10
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 23 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 82
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 403
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 83 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 141
Query: 404 ERLRKEFAPFGTITSAKVMLEDG 472
E +R+ FA FG IT ++ G
Sbjct: 142 E-IRQGFASFGRITEVRIFKMQG 163
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 60.1 bits (139), Expect = 8e-10
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 33 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 92
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 403
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 93 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 151
Query: 404 ERLRKEFAPFGTITSAKVMLEDG 472
E +R+ FA FG IT ++ G
Sbjct: 152 E-IRQGFASFGRITEVRIFKMQG 173
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 60.1 bits (139), Expect = 8e-10
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 136 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 403
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 196 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 254
Query: 404 ERLRKEFAPFGTITSAKVMLEDG 472
E +R+ FA FG IT ++ G
Sbjct: 255 E-IRQGFASFGRITEVRIFKMQG 276
Score = 56.8 bits (131), Expect = 7e-09
Identities = 36/135 (26%), Positives = 72/135 (53%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+YV N +++ + +F + G +T KV++ DG++ + FV F D A +A +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIF--DGSNDPYAFVEFSDHGQASQALQTMN 105
Query: 236 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 415
K L+ + + V A + ++Q ++ TR+ +++V +L +D+++LR
Sbjct: 106 -KRLLLDREMKVNWAVEPGQQQSKIDT----------TRH--FHVFVGDLSSEVDNQKLR 152
Query: 416 KEFAPFGTITSAKVM 460
+ F PFG ++ AKV+
Sbjct: 153 EAFQPFGDVSDAKVI 167
Score = 29.9 bits (64), Expect = 0.98
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
LYV NLD T+ ++ + F G++T KV+ +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD 80
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 60.1 bits (139), Expect = 8e-10
Identities = 39/143 (27%), Positives = 75/143 (52%), Gaps = 3/143 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
+V+V + + ++ L++ F+ +G ++ KV+ + S+G+GFV++ + AERA +
Sbjct: 104 HVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 163
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVN--LYVKNLDDTIDD 403
+NG+ L + + A +K Q++ E+ E + G N +YV N+ +D
Sbjct: 164 MNGQWLGR-RTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIASLTED 222
Query: 404 ERLRKEFAPFGTITSAKVMLEDG 472
E +R+ FA FG IT ++ G
Sbjct: 223 E-IRQGFASFGRITEVRIFKMQG 244
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 236 GKELVEGKPLYVGRAQKKAERQK 304
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 59.7 bits (138), Expect = 1e-09
Identities = 32/83 (38%), Positives = 50/83 (60%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N F D LK MFEK+G ++ ++++ + G S+GFGFV E P AERA EL+
Sbjct: 155 LHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG-SKGFGFVTMERPQDAERARQELH 213
Query: 236 GKELVEGKPLYVGRAQKKAERQK 304
G ++EG+ + V A + +K
Sbjct: 214 G-SMIEGRKIEVNCATARVHSKK 235
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 226
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 107 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 166
Query: 227 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
LN EG + + Q++ + NLY+ NL ++
Sbjct: 167 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 202
Query: 407 RLRKEFAPFGTITSAKVM 460
L E FG + S +++
Sbjct: 203 MLETELNKFGMVISTRIL 220
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
TN+Y+ N DF+++ML+ K+G + S +++ D SRG GF + + E
Sbjct: 188 TNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISA 247
Query: 230 LNG 238
LNG
Sbjct: 248 LNG 250
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/138 (28%), Positives = 64/138 (46%), Gaps = 1/138 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK-VMYKDDGNSRGFGFVAFEDPDAAERACI 226
TN+Y++ + +D++L++M KYG I S K +M K N +G+GFV FE P AA A
Sbjct: 81 TNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAAAAVD 140
Query: 227 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
LN EG + + Q++ + NLY+ NL ++
Sbjct: 141 GLN----TEGVQAQMAKLQQQEQ--------------------DPTNLYIANLPLDFTEQ 176
Query: 407 RLRKEFAPFGTITSAKVM 460
L E FG + S +++
Sbjct: 177 MLETELNKFGMVISTRIL 194
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
TN+Y+ N DF+++ML+ K+G + S +++ D SRG GF + + E
Sbjct: 162 TNLYIANLPLDFTEQMLETELNKFGMVISTRILRTPDNQSRGVGFARMDSKEKCEVIISA 221
Query: 230 LNG 238
LNG
Sbjct: 222 LNG 224
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 236 GKELVEGKPLYVGRAQKKAERQK 304
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 54.4 bits (125), Expect = 4e-08
Identities = 28/83 (33%), Positives = 48/83 (57%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N + + L MFEK G + ++++ + G S+GFGFV ++PD A+RA E N
Sbjct: 102 LHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFN 160
Query: 236 GKELVEGKPLYVGRAQKKAERQK 304
G +EG+ + V A ++ +K
Sbjct: 161 G-TTIEGRRVEVNLATQRVHNKK 182
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGNSRGFGFVAF 193
+K E +YV ED +++ML + F KYG +T S ++ K RGFGFV F
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 163 DDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
Score = 44.4 bits (100), Expect = 4e-05
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 232
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 413 RKEFAPFGTITSAKVMLE 466
+ F +GT+T ++++L+
Sbjct: 131 TEYFTKYGTVTKSEIILD 148
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGNSRGFGFVAF 193
+K E +YV ED +++ML + F KYG +T S ++ K RGFGFV F
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 125 DDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 172
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 98 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 274
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 275 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 454
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 455 VMLE 466
++L+
Sbjct: 107 IILD 110
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGNSRGFGFVAF 193
+K E +YV ED +++ML + F KYG +T S ++ K RGFGFV F
Sbjct: 65 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 125 DDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 172
Score = 37.9 bits (84), Expect = 0.004
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Frame = +2
Query: 98 LKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVG 274
+++ + ++G IT VM SRGFGFV F + A + +++GK +
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR--PHIIDGKTV--- 55
Query: 275 RAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 454
K+A + + R + ++RL YV + + ++ L + F +GT+T ++
Sbjct: 56 -DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDMLTEYFTKYGTVTKSE 106
Query: 455 VMLE 466
++L+
Sbjct: 107 IILD 110
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGNSRGFGFVAF 193
+K E +YV ED +++ML + F KYG +T S ++ K RGFGFV F
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 163 DDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
Score = 44.4 bits (100), Expect = 4e-05
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 232
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 413 RKEFAPFGTITSAKVMLE 466
+ F +GT+T ++++L+
Sbjct: 131 TEYFTKYGTVTKSEIILD 148
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 53.2 bits (122), Expect = 9e-08
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRIT-SHKVMYKDDGNSRGFGFVAF 193
+K E +YV ED +++ML + F KYG +T S ++ K RGFGFV F
Sbjct: 103 DKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSER 343
+D D+ ++ C+ L +V G V + K E K + + + R
Sbjct: 163 DDHDSVDQ-CV-LQKSHMVNGHRCDVRKGLSKDEMSKAQMNRDRETRGGR 210
Score = 44.4 bits (100), Expect = 4e-05
Identities = 31/138 (22%), Positives = 67/138 (48%), Gaps = 1/138 (0%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 232
++V + +D+++++ + ++G IT VM SRGFGFV F + A +
Sbjct: 25 IFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQR 84
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 412
+++GK + K+A + + R + ++RL YV + + ++ L
Sbjct: 85 --PHIIDGKTV----DPKRAVPRDDKNRSESNVSTKRL--------YVSGVREDHTEDML 130
Query: 413 RKEFAPFGTITSAKVMLE 466
+ F +GT+T ++++L+
Sbjct: 131 TEYFTKYGTVTKSEIILD 148
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 52.0 bits (119), Expect = 2e-07
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
+V+V N D S++ ++ +F K G + S K+++ ++ G +G+GF+ F D AE A
Sbjct: 19 SVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRN 78
Query: 230 LNGKELVEGKPLYVGRA 280
LNG EL G+ L V A
Sbjct: 79 LNGYEL-SGRILRVDSA 94
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 127 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 186
Query: 230 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 370
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 187 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 233
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 52.0 bits (119), Expect = 2e-07
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 1/108 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T+V V+N ++M++D+FE +GRI + + +RGF + F + D A+++C +
Sbjct: 272 THVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNRENRGFATITFRNADDAQKSCEQ 331
Query: 230 LNGKELVEGKPLYVG-RAQKKAERQKELKRKFEQLKSERLTRYQGVNL 370
LN EL G+ + + + + +A K+ + Q + + QG +L
Sbjct: 332 LNNFELA-GRCIRLSIKQESQAPAVKKEEASIHQRSLDDVGDRQGFSL 378
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 52.0 bits (119), Expect = 2e-07
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIEL 232
V+ + G + SDE+L F KY KV+ + N S+G+GFV+F D + RA E+
Sbjct: 205 VFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREM 264
Query: 233 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 334
+GK V +P+ + ++ K +K+K +Q K
Sbjct: 265 DGK-YVGNRPIKLRKSAWKERNIDVIKQKRKQKK 297
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 51.2 bits (117), Expect = 4e-07
Identities = 25/66 (37%), Positives = 41/66 (62%)
Frame = +2
Query: 107 MFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQK 286
MFEK G + ++++ + G S+GFGFV ++PD A+RA E NG +EG+ + V A +
Sbjct: 1 MFEKVGPVVDVEIIFNERG-SKGFGFVTMQNPDDADRARAEFNG-TTIEGRRVEVNLATQ 58
Query: 287 KAERQK 304
+ +K
Sbjct: 59 RVHNKK 64
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 51.2 bits (117), Expect = 4e-07
Identities = 37/138 (26%), Positives = 69/138 (50%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N +DE L +F + G + K+++ +G + + FV F D + A A N
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIF--EGLNDPYAFVEFSDHNQATLALQSHN 99
Query: 236 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 415
G+EL+E K ++V A E + E +R+ +++V +L ID +LR
Sbjct: 100 GRELLE-KEMHVTWA-------FEPREPGENRSKPETSRH--FHVFVGDLCSEIDSTKLR 149
Query: 416 KEFAPFGTITSAKVMLED 469
+ F FG ++ AK++ ++
Sbjct: 150 EAFVKFGEVSEAKIIRDN 167
Score = 44.8 bits (101), Expect = 3e-05
Identities = 22/80 (27%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 2 PRKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGF 178
PR+ E + +V+V + + L++ F K+G ++ K++ ++ N +G+
Sbjct: 116 PREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGY 175
Query: 179 GFVAFEDPDAAERACIELNG 238
GFV++ + AERA E+NG
Sbjct: 176 GFVSYPRREDAERAIDEMNG 195
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 50.8 bits (116), Expect = 5e-07
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +2
Query: 17 EKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF 193
E +G + +FT ++V SD+ L + FE++G I V+ ++ SRG+GFV
Sbjct: 24 EPVVGSRDTMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTM 83
Query: 194 EDPDAAERACIELNGKELVEGKPLYVGRA 280
+D +AERAC + N +++G+ V A
Sbjct: 84 KDRASAERACKDPN--PIIDGRKANVNLA 110
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 50.4 bits (115), Expect = 6e-07
Identities = 23/62 (37%), Positives = 34/62 (54%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
T + VKN +++ L+ FEKYG+I+ + Y +G RGF FV F D +A A +
Sbjct: 3 TRLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKEGKFRGFAFVGFLDEGSASNALAK 62
Query: 230 LN 235
N
Sbjct: 63 SN 64
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = +2
Query: 5 RKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFG 181
R E+ + EK ++++N ++ L+ +F+KYG ++ +V+ K G +GF
Sbjct: 264 RDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFA 323
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKE 307
V F P+AA A L+G + +G+ +++ +K ++ E
Sbjct: 324 IVEFVFPEAAVAAYSALDG-YVFKGRMMHILPGDEKRTKEGE 364
Score = 40.3 bits (90), Expect = 7e-04
Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Frame = +2
Query: 5 RKXREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS--RGF 178
++ ++KE GE KL V+N + S + ++ +FE +G + + ++ K RGF
Sbjct: 737 KEVKQKEQGECTKLL----VRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGF 792
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRK 319
GFV F D A RA L + G+ L + A K E +EL+ K
Sbjct: 793 GFVDFISADEAHRAFDSLVHSTHLYGRRLVLEWA-KDDETVEELREK 838
Score = 29.1 bits (62), Expect = 1.7
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
L VKNL T +++LRK F +G I+ A +
Sbjct: 5 LIVKNLPSTCTEQQLRKFFEKYGQISDASL 34
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 50.0 bits (114), Expect = 9e-07
Identities = 27/79 (34%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
+VYV N ++E L + F G+I + +++ ++ G RGF F+ F + +A+RA +
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 230 LNGKELVEGKPLYVGRAQK 286
+NG E G+PL V A K
Sbjct: 66 MNGAEF-NGRPLRVNLANK 83
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 47.6 bits (108), Expect = 5e-06
Identities = 24/85 (28%), Positives = 45/85 (52%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+ V+V+N +D+ LK +F K+G +TS + + DG +G FV F D +A+ + C+
Sbjct: 683 SKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHKDGKPKGIAFVDF-DTEASAQKCVA 741
Query: 230 LNGKELVEGKPLYVGRAQKKAERQK 304
K ++ + L V + ++ K
Sbjct: 742 SGDKLMLRERELEVALSNPPVKKDK 766
Score = 38.3 bits (85), Expect = 0.003
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 1/140 (0%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V N +++ ++ E I + D + RGF +V E+ A++A L
Sbjct: 595 IFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVH-RGFAYVVMENDQKAQQAL--LK 651
Query: 236 GKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLR 415
+ V+G+P+++ + +K + KF T + ++V+N+ D+ L+
Sbjct: 652 DRVPVKGRPMFISAN----DPEKRVGFKFS-------TTLEKSKVFVRNVHFQATDDELK 700
Query: 416 KEFAPFGTITSA-KVMLEDG 472
F+ FGT+TS +V +DG
Sbjct: 701 ALFSKFGTVTSVRRVTHKDG 720
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 236 GKELVEGKPLYVGRA 280
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 47.6 bits (108), Expect = 5e-06
Identities = 27/75 (36%), Positives = 44/75 (58%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+YV N F ++ L MF YGR+ S +++ D G S+GFGFV + ++ E+A L+
Sbjct: 53 IYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG-SKGFGFVTLDSIESCEKARAALH 111
Query: 236 GKELVEGKPLYVGRA 280
+ V+G+ + V RA
Sbjct: 112 -ESHVQGRIIEVRRA 125
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 46.4 bits (105), Expect = 1e-05
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 229
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 74 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 115
Query: 410 LRKEFAPFGTITSAKVMLED 469
L F+ FG I ++ D
Sbjct: 116 LYDTFSAFGVILQVPKIMRD 135
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACI 226
N++V N + +++L D F +G I K+M D G S+GF F+ F +A++ A
Sbjct: 101 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Query: 227 ELNGKEL 247
+NG+ L
Sbjct: 161 AMNGQFL 167
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVEG--KPLYVGRAQKKAERQKELKRK 319
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 230 LNGKEL 247
+NG ++
Sbjct: 560 MNGFQI 565
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVEG--KPLYVGRAQKKAERQKELKRK 319
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 230 LNGKEL 247
+NG ++
Sbjct: 560 MNGFQI 565
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 46.4 bits (105), Expect = 1e-05
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 2/140 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 229
+YV E S+ +L ++ + G + S M KD N +GFGFV F + A+ A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVN-MPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
LN +L GKP+ V +A E+ ++ G N++V NLD +D++
Sbjct: 84 LNMIKLY-GKPIKVNKASAH-EKNMDV----------------GANIFVGNLDPEVDEKL 125
Query: 410 LRKEFAPFGTITSAKVMLED 469
L F+ FG I ++ D
Sbjct: 126 LYDTFSAFGVILQVPKIMRD 145
Score = 41.1 bits (92), Expect = 4e-04
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYK-DDGNSRGFGFVAFEDPDAAERACI 226
N++V N + +++L D F +G I K+M D G S+GF F+ F +A++ A
Sbjct: 111 NIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Query: 227 ELNGKEL 247
+NG+ L
Sbjct: 171 AMNGQFL 177
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVEG--KPLYVGRAQKKAERQKELKRK 319
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 429 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 488
Query: 230 LNGKEL 247
+NG ++
Sbjct: 489 MNGFQI 494
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 462
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVEG--KPLYVGRAQKKAERQKELKRK 319
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVEG--KPLYVGRAQKKAERQKELKRK 319
+ +EG PL V A ++ K++K K
Sbjct: 204 HSQTMEGCSAPLVVKFAD--TQKDKDVKTK 231
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 500 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 559
Query: 230 LNGKEL 247
+NG ++
Sbjct: 560 MNGFQI 565
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 533
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
+VYV N ++E + + F G + + +++Y ++ G RGF FV F + A+RA +
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 230 LNGKELVEGKPLYVGRAQK 286
LNG G+ L V A K
Sbjct: 67 LNGVAF-NGRNLRVNYANK 84
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 35 KAKLFTN---VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDP 202
+AKL T V++ + E +K FE YG++ +M+ K RGFGFV F+
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSD 185
Query: 203 DAAERACIELNGKELVEGKPLYVGRAQKK 289
+ A++ C E++ E + GK + +AQ K
Sbjct: 186 EVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = +2
Query: 92 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERAC----IELNGKELVE 253
E L+D F ++G + VM +D +RGFGF+ F DP + ++ EL+GK+ ++
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK-ID 116
Query: 254 GKPLYVGRAQKK 289
K + R Q K
Sbjct: 117 PKVAFPKRTQAK 128
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 45.2 bits (102), Expect = 2e-05
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Frame = +2
Query: 35 KAKLFTN---VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDP 202
+AKL T V++ + E +K FE YG++ +M+ K RGFGFV F+
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSD 185
Query: 203 DAAERACIELNGKELVEGKPLYVGRAQKK 289
+ A++ C E++ E + GK + +AQ K
Sbjct: 186 EVADKVC-EIHFHE-INGKMVECKKAQPK 212
Score = 37.5 bits (83), Expect = 0.005
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Frame = +2
Query: 92 EMLKDMFEKYGRITSHKVMYKDDGN--SRGFGFVAFEDPDAAERAC----IELNGKELVE 253
E L+D F ++G + VM +D +RGFGF+ F DP + ++ EL+GK+ ++
Sbjct: 59 ENLRDYFGRFGEVNECMVM-RDPATKRARGFGFITFVDPSSVDKVLNNREHELDGKK-ID 116
Query: 254 GKPLYVGRAQKK 289
K + R Q K
Sbjct: 117 PKVAFPKRTQAK 128
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.4 bits (100), Expect = 4e-05
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACIEL 232
+YV + D ++ L +FEK G+I ++M G SRG+ FV + + + A A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 233 NGKELVEGKPLYV 271
+G E+ GKPL V
Sbjct: 262 DGHEISTGKPLKV 274
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 44.4 bits (100), Expect = 4e-05
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKV-MYKDDGNSRGFGFVAFEDPDAAERACIEL 232
+YV F ED ++++L F +G + + + M + G RGFGFV F+ + A A +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 233 NGKELVEGKPLYV--GRAQKKAER-QKELKRKFEQLK 334
N EL GK + V R K ER QK + E LK
Sbjct: 73 NESELF-GKTIRVNFARPPKATERSQKPVWADDEWLK 108
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 44.0 bits (99), Expect = 6e-05
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVM-YKDDGNSRGFGFVAFEDPDAAERACIE 229
V+++N D +E++K+ K+G+I + YKD G+S+G FV F P A CIE
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASN-CIE 322
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.0 bits (99), Expect = 6e-05
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIE 229
+VYV N +++ L + F + G +++ +++ ++ G RGF FV F + AA+RA +
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 230 LNGKELVEGKPLYVGRAQKK 289
NG + G+ L V AQ +
Sbjct: 65 FNGVDF-NGRALRVNLAQNR 83
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 44.0 bits (99), Expect = 6e-05
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVA 190
R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F FV
Sbjct: 90 RQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVE 149
Query: 191 FEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQGVN 367
+E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 150 YEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFR 208
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
+YV ++ + + L+ F FG I ++
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 38 AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAE 214
AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 203 AKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQS 262
Query: 215 RACIELN 235
A +N
Sbjct: 263 EAIAGMN 269
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 287 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 448
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 44.0 bits (99), Expect = 6e-05
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVA 190
R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F FV
Sbjct: 90 RQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVE 149
Query: 191 FEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQGVN 367
+E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 150 YEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFR 208
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
+YV ++ + + L+ F FG I ++
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 38 AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAE 214
AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 203 AKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQS 262
Query: 215 RACIELNGKELVEGKPLYVGR 277
A +N +L G+ L VG+
Sbjct: 263 EAIAGMNMFDL-GGQYLRVGK 282
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 287 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 448
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 44.0 bits (99), Expect = 6e-05
Identities = 31/150 (20%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVA 190
R++ + + + +YV + + ++ML+ F+ +G I S + + G+ + F FV
Sbjct: 90 RQQMYSQALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVE 149
Query: 191 FEDPDAAERACIELNGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSERLTRYQGVN 367
+E P+AA A +NG +++ G+ L V + R + + + + + +
Sbjct: 150 YEVPEAALLAQESMNG-QMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFR 208
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
+YV ++ + + L+ F FG I ++
Sbjct: 209 VYVSSVHPDLSETDLKSVFEAFGEIVKCQL 238
Score = 40.7 bits (91), Expect = 5e-04
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +2
Query: 38 AKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS-RGFGFVAFEDPDAAE 214
AK + VYV + D S+ LK +FE +G I ++ G RGFG++ F + +
Sbjct: 203 AKKYFRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQS 262
Query: 215 RACIELNGKELVEGKPLYVGR 277
A +N +L G+ L VG+
Sbjct: 263 EAIAGMNMFDL-GGQYLRVGK 282
Score = 29.5 bits (63), Expect = 1.3
Identities = 15/54 (27%), Positives = 32/54 (59%)
Frame = +2
Query: 287 KAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITS 448
+ ++Q++ ++ +Q+ S+ L+ +YV ++ I ++ LR+ F PFG I S
Sbjct: 79 RQQKQQQENQQRQQMYSQALSIMS--RIYVGSISFEIREDMLRRAFDPFGPIKS 130
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 43.6 bits (98), Expect = 7e-05
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 1/98 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
N++V + +D +D L +F+KY K+ DG+S+G GFV F + + A +E+
Sbjct: 157 NLHVSSVPDDMADAELYRIFDKYQSCRGAKMFRFVDGSSKGSGFVRFGNQTDQQMALVEM 216
Query: 233 NGKELVEGKPLYVGRAQKKAER-QKELKRKFEQLKSER 343
+ + V G + + A + ER + R+F+ +++R
Sbjct: 217 H-RTKVGGCRIILKLAGSRGERLDRGESRQFKSQRNDR 253
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 43.6 bits (98), Expect = 7e-05
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 1/141 (0%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACI 226
TN+ + + + E ++ +F G I S K++ K G S G+GFV + + A RA
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 227 ELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
NG L + K +K + + ++++ +G NLYV + ++
Sbjct: 102 SFNGLRL----------------QNKTIKVSYARPSNDQI---KGSNLYVSGIPKSMTLH 142
Query: 407 RLRKEFAPFGTITSAKVMLED 469
L F PFG I +++++ ++
Sbjct: 143 ELESIFRPFGQIITSRILSDN 163
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD-DGNSRGFGFVAFEDPDAAERACI 226
+N+YV + + L+ +F +G+I + +++ + G S+G GFV F+ D A+ A
Sbjct: 128 SNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIK 187
Query: 227 ELNG 238
LNG
Sbjct: 188 TLNG 191
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 43.6 bits (98), Expect = 7e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 126
Query: 236 GKEL-VEGKPLYVGRAQKK 289
K+L + L +G A +K
Sbjct: 127 PKQLEFRSRKLNLGPAIRK 145
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 43.6 bits (98), Expect = 7e-05
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
++V F ++ L++ FEK+ + K++ DG S+G+GF+ FE D AE +L
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE-IRKLT 127
Query: 236 GKEL-VEGKPLYVGRAQKK 289
K+L + L +G A +K
Sbjct: 128 PKQLEFRSRKLNLGPAIRK 146
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 1e-04
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 62 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIELN 235
V N ++ +++ L+D+F K GR+ + K G +GF FV FE D A RA ELN
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIAELN 238
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + +DF D L + F +G I S KV N S+ FGFV++E+ +A A
Sbjct: 336 NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISA 395
Query: 230 LNGKEL 247
+NG ++
Sbjct: 396 MNGFQI 401
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 369
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 41.1 bits (92), Expect = 4e-04
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ + ++E L+++F K+G I V+ DG SRG FV F + A A E++
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRGCAFVTFTNRSCAVVATKEMH 203
Query: 236 GKELVE 253
+ +E
Sbjct: 204 HSQTME 209
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 230 LNGKEL 247
+NG ++
Sbjct: 490 MNGFQI 495
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 278 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 458 MLE 466
++
Sbjct: 461 FVD 463
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 40.7 bits (91), Expect = 5e-04
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Frame = +2
Query: 53 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN-SRGFGFVAFEDPDAAERACIE 229
N+++ + ++F D L MF +G I S KV N S+ FGFV++++ +++ A
Sbjct: 430 NLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQAAITA 489
Query: 230 LNGKEL 247
+NG ++
Sbjct: 490 MNGFQI 495
Score = 35.5 bits (78), Expect = 0.020
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 278 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
A + A+ Q++ + + G NL++ +L D L + FAPFG I SAKV
Sbjct: 401 ALQLAQIQQQAAAALPMVTPREVLGPDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKV 460
Query: 458 MLE 466
++
Sbjct: 461 FVD 463
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 40.3 bits (90), Expect = 7e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 236 GKELVEGKPLYV 271
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 40.3 bits (90), Expect = 7e-04
Identities = 27/72 (37%), Positives = 37/72 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV N D ++ ++D+F KYGRI K + G F FV FED AE A +
Sbjct: 11 VYVGNLPGDVREKEVEDIFHKYGRI---KYVDIKSGRGPAFAFVEFEDHRDAEDAVRARD 67
Query: 236 GKELVEGKPLYV 271
G E +G+ + V
Sbjct: 68 GYEF-DGRRIRV 78
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 226
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 227 ELNGKELVEGKPLYVGRAQ 283
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 39.9 bits (89), Expect = 0.001
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACI 226
T++ + N + L+ FE+YG I H K S+GFGFV F + AE A
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALD 78
Query: 227 ELNGKELVEGKPLYVGRAQ 283
+GK LV+G+ L V A+
Sbjct: 79 RTDGK-LVDGRELRVTLAK 96
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Frame = +2
Query: 47 FTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACI 226
+ ++V + S+ L+ FE YG+I +++ + G RG+ F+ + D A
Sbjct: 103 YRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYK 162
Query: 227 ELNGKELVEGKPLYV----GRAQK 286
+ +G + V+GK L V GR QK
Sbjct: 163 KADGIK-VDGKRLVVDYERGRTQK 185
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
V+V N + SDE ++ + + G + S K + +G +GFGF F D + RA L+
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
Query: 236 GKELVEGKPLYVGRAQKKAE--RQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
L + K L V +K + R+ ++ + Q K E ++ + + DD DE
Sbjct: 109 EFHLGD-KKLTVKPDEKVRDDLRKNAIENRKRQGKKELKLKHDEL---PADEDDLKKDEE 164
Query: 410 LR 415
+R
Sbjct: 165 IR 166
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 39.5 bits (88), Expect = 0.001
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 2/122 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
V+V N + SDE ++ + + G + S K + +G +GFGF F D + RA L+
Sbjct: 49 VFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQGFGFCHFTDLEGTLRALRILH 108
Query: 236 GKELVEGKPLYVGRAQKKAE--RQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDER 409
L + K L V +K + R+ ++ + Q K E ++ + + DD DE
Sbjct: 109 EFHLGD-KKLTVKPDEKVRDDLRKNAIENRKRQGKKELKLKHDEL---PADEDDLKKDEE 164
Query: 410 LR 415
+R
Sbjct: 165 IR 166
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Frame = +2
Query: 62 VKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAF---EDPDAA-ERAC- 223
V N +++ L+D+F ++G I ++Y + GNSRGFGF+ F ED AA ++ C
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
Query: 224 IELNGKEL 247
+L+G ++
Sbjct: 140 TDLDGHKI 147
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 236 GKEL 247
GKEL
Sbjct: 58 GKEL 61
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 236 GKEL 247
GKEL
Sbjct: 58 GKEL 61
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+ S++ ++ F YG+I V+ K+ GFGFV F+D AE A +LN
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRD--VLLKN-----GFGFVEFDDKRDAEDAVHDLN 57
Query: 236 GKEL 247
GKEL
Sbjct: 58 GKEL 61
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 160 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 215
Query: 266 YVGRAQKKAERQKELKRKFEQLKSER 343
V K KR Q S+R
Sbjct: 216 EVRVFTKHPNGSTYWKRPQSQSHSQR 241
Score = 35.9 bits (79), Expect = 0.015
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 229
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 51 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 406
K + GK + RA + + + F + G L + + + + +
Sbjct: 110 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 162
Query: 407 RLRKEFAPFGTITSAKVM 460
LR F FGT+ +++
Sbjct: 163 SLRVYFETFGTLDQVEIL 180
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 180 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 235
Query: 266 YVGRAQKKAERQKELKRKFEQLKSER 343
V K KR Q S+R
Sbjct: 236 EVRVFTKHPNGSTYWKRPQSQSHSQR 261
Score = 35.9 bits (79), Expect = 0.015
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 229
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 71 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 406
K + GK + RA + + + F + G L + + + + +
Sbjct: 130 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 182
Query: 407 RLRKEFAPFGTITSAKVM 460
LR F FGT+ +++
Sbjct: 183 SLRVYFETFGTLDQVEIL 200
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 39.1 bits (87), Expect = 0.002
Identities = 24/86 (27%), Positives = 41/86 (47%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
S + L+ FE +G + +++ G RG GFV +ED ++A+R +G+ +V + +
Sbjct: 181 SVDSLRVYFETFGTLDQVEIL----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKI 236
Query: 266 YVGRAQKKAERQKELKRKFEQLKSER 343
V K KR Q S+R
Sbjct: 237 EVRVFTKHPNGSTYWKRPQSQSHSQR 262
Score = 35.9 bits (79), Expect = 0.015
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG--NSRGFGFVAFEDPDAAERACIE 229
+++ D +DE L + F ++G + ++ +D +SRGFGFV F +AE A +
Sbjct: 72 LFIGGLSHDTTDEQLGNYFSQWGPVVD-AIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD-E 406
K + GK + RA + + + F + G L + + + + +
Sbjct: 131 RPHK--LGGKTVDSKRAIPREQMSSMIPPPFFETDPA-----PGCKLLLNGITNGVHSVD 183
Query: 407 RLRKEFAPFGTITSAKVM 460
LR F FGT+ +++
Sbjct: 184 SLRVYFETFGTLDQVEIL 201
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 38.7 bits (86), Expect = 0.002
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +2
Query: 50 TNVYVKNFG----EDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAER 217
T +Y+ N G + +++ L D F +YG I +V+ +G F+ F +AAER
Sbjct: 235 TTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVL-----TEKGCAFIEFTTREAAER 289
Query: 218 ACIELNGKELVEGKPLYVGRAQKKAER 298
A K ++GK L + + +A+R
Sbjct: 290 AAERSFNKTFIKGKRLTIRWGEPQAKR 316
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 236 GKELVEGKPLYVGRAQKKAER 298
G +L + K L V A +R
Sbjct: 353 GMQLGD-KQLVVQLACANQQR 372
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 293 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 352
Query: 236 GKELVEGKPLYVGRAQKKAER 298
G +L + K L V A +R
Sbjct: 353 GMQLGD-KQLVVQLACANQQR 372
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 268 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 327
Query: 236 GKELVEGKPLYVGRAQKKAER 298
G +L + K L V A +R
Sbjct: 328 GMQLGD-KQLVVQLACANQQR 347
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/81 (23%), Positives = 40/81 (49%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+++ +++ +K++ +G + + + GNS+G+ F + DP ++A LN
Sbjct: 271 IFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAGLN 330
Query: 236 GKELVEGKPLYVGRAQKKAER 298
G +L + K L V A +R
Sbjct: 331 GMQLGD-KQLVVQLACANQQR 350
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VY+ SD ++ F YG+++ V+ K+ GFGFV F+D A+ A +LN
Sbjct: 4 VYIGRLPNRASDRDVEHFFRGYGKLSD--VIMKN-----GFGFVDFQDQRDADDAVHDLN 56
Query: 236 GKEL 247
GKEL
Sbjct: 57 GKEL 60
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 232
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 233 NGKELVEGKPLYVGRAQKKAERQ 301
++ ++GK + V A+ + ++
Sbjct: 90 -REQTIKGKSVEVKPAKSRENKK 111
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 35 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 211
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 212 ERA 220
++A
Sbjct: 165 DKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 38.3 bits (85), Expect = 0.003
Identities = 21/83 (25%), Positives = 42/83 (50%), Gaps = 1/83 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAAERACIEL 232
++V + ++E L F +YG + +V Y + +G SRGF FV F + + A
Sbjct: 31 IFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA- 89
Query: 233 NGKELVEGKPLYVGRAQKKAERQ 301
++ ++GK + V A+ + ++
Sbjct: 90 -REQTIKGKSVEVKPAKSRENKK 111
Score = 37.1 bits (82), Expect = 0.006
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 35 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY-KDDGNSRGFGFVAFEDPDAA 211
K++ V+V D+S++ L+ FE++G++ + + K R F F+ FE+ ++A
Sbjct: 105 KSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESA 164
Query: 212 ERA 220
++A
Sbjct: 165 DKA 167
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 37.5 bits (83), Expect = 0.005
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 74 GEDF--SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFV 187
G DF +DE + FE G + ++ K DGNS+GFGFV
Sbjct: 179 GVDFKTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFV 218
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 37.1 bits (82), Expect = 0.006
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKD--DGNSRGFGFVAFEDPDAAERACIE 229
+YV NF E+ +E+L+++F + G + KV+ +D D N++ F V FED + A
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVV--KVILRDVRDSNAK-FALVEFEDELSVLFAIEL 71
Query: 230 LNGKEL 247
+NG L
Sbjct: 72 MNGVRL 77
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 36.7 bits (81), Expect = 0.009
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
+Y+KN + E + ++F K+G + +V + +RG FV +ED A+ AC L+
Sbjct: 21 LYIKNLPYKITTEEMYEIFGKFGAVRQIRV--GNTAETRGTAFVVYEDIFDAKTACEHLS 78
Query: 236 G 238
G
Sbjct: 79 G 79
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 36.7 bits (81), Expect = 0.009
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 8/119 (6%)
Frame = +2
Query: 23 ELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSH--------KVMYKDDGNSRGF 178
+LG+K VYV N ED +DE + K G I K+ +++G +G
Sbjct: 173 DLGDKVHA---VYVSNLPEDITDEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGD 229
Query: 179 GFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRY 355
G + ++ E AC L+G L G+ + V A+ + + + RK +L + + RY
Sbjct: 230 GRCCYIKKESVELACNILDGANL-NGREVKVEEARFEMKGDFDPARKRRKLTAAQKKRY 287
Score = 27.9 bits (59), Expect = 3.9
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +2
Query: 275 RAQKKAERQKELKRK-------FEQLKSERLTRYQGVN-LYVKNLDDTIDDERLRKEFAP 430
+AQK+ E +KE KRK E K L V+ +YV NL + I DE +K +
Sbjct: 142 KAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHAVYVSNLPEDITDEEFQKFMSK 201
Query: 431 FGTI 442
G I
Sbjct: 202 CGVI 205
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.5 bits (78), Expect = 0.020
Identities = 25/93 (26%), Positives = 46/93 (49%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIE 229
+NV+V+ D D ++++ +G IT V + G+GFV F+ A++ +E
Sbjct: 96 SNVFVRGISRDMPDT---ELYQAFGGITDGVVQCHV---ADGYGFVLFDTRANAQKKIVE 149
Query: 230 LNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 328
++GK L GK + V A+ +K + E+
Sbjct: 150 MDGKTL-NGKLISVSWARPDTVGRKRKRPMSEE 181
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 35.1 bits (77), Expect = 0.026
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKVMLE 466
G NL++ +L D L FAPFG I SAKV ++
Sbjct: 75 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFID 110
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.045
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 113 EKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKK 289
E+ + H V +D G+ +GF +V FE+ A LNG + + L V RAQ++
Sbjct: 34 EELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADF-GNRVLKVNRAQQR 91
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.9 bits (74), Expect = 0.060
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 236 GKEL 247
G +
Sbjct: 61 GSRI 64
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.9 bits (74), Expect = 0.060
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 236 GKEL 247
G +
Sbjct: 61 GSRI 64
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.9 bits (74), Expect = 0.060
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
VYV D + + L+++F+++GRI V + GF FV ++D AE A L+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPP----GFAFVEYDDVRDAEDAVRALD 60
Query: 236 GKEL 247
G +
Sbjct: 61 GSRI 64
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 33.1 bits (72), Expect = 0.10
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITS-HKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 232
+Y+ S+ + +F +YG + + + + KD G S+GF F+ ++D + A
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 233 NGKEL 247
NG L
Sbjct: 100 NGISL 104
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 33.1 bits (72), Expect = 0.10
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +2
Query: 65 KNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKE 244
+ + +DF +E+ +M KYG + V + G +V F + AE+A +LN +
Sbjct: 84 QRYFDDFYEEVFVEMERKYGEVEEINVCENIGEHMVGNVYVKFMKEEDAEKAKNDLNNR- 142
Query: 245 LVEGKPLY 268
G+P+Y
Sbjct: 143 WFNGQPIY 150
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 119 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 119 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 32.3 bits (70), Expect = 0.18
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 119 YGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGKPL 265
YG+I + + Y GF FV FED AE AC +L+GK + EG +
Sbjct: 25 YGKINNISMKY-------GFAFVDFEDSRDAEDACHDLDGKTM-EGSSM 65
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.24
Identities = 17/70 (24%), Positives = 32/70 (45%)
Frame = +2
Query: 44 LFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERAC 223
L +++ N + + L ++F G+IT +G S+G + + P A +A
Sbjct: 186 LCERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKEGKSKGVCVIQYTHPIEAVQAV 245
Query: 224 IELNGKELVE 253
LNG+ L +
Sbjct: 246 SMLNGQRLFD 255
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 31.5 bits (68), Expect = 0.32
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 56 VYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRG 175
+++ + ++E L+++F K+G I V+ DG SRG
Sbjct: 144 LFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGKSRG 183
>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 8, isoform a protein.
Length = 1219
Score = 31.5 bits (68), Expect = 0.32
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 212 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQ 328
E A IE +E E + L + A+K+AERQ+E+KRK E+
Sbjct: 945 ELAEIERKRRESEEKERLEI-EAKKEAERQREIKRKLEE 982
>Z49910-7|CAA90124.4| 384|Caenorhabditis elegans Hypothetical
protein F44G4.1 protein.
Length = 384
Score = 31.1 bits (67), Expect = 0.42
Identities = 31/129 (24%), Positives = 53/129 (41%), Gaps = 1/129 (0%)
Frame = +2
Query: 80 DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELNGKELVEGK 259
+ +DE L+++ EKY + KDD F + A + + K +G+
Sbjct: 66 ELTDEKLQELLEKYEASKATATKTKDD-----FKHLPKSQRGKALKRALR-KDKRARQGE 119
Query: 260 PLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKEFAP-FG 436
+ ++ QKE+ + E ++ T V DD ++ + EFAP F
Sbjct: 120 RAQIRDELGESAPQKEVPKTIESMREYDAT-------MVNEEDDEVEHDEANDEFAPYFN 172
Query: 437 TITSAKVML 463
TS KVM+
Sbjct: 173 RETSPKVMI 181
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 368 LYVKNLDDTIDDERLRKEFAPFGTITSAKVMLED 469
LYV NLD T+ ++ + F G++T KV+ ++
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 30.7 bits (66), Expect = 0.56
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 14 REKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNS--RGFGFV 187
R A V +KN + L+++F YG I + + N RG+G+V
Sbjct: 121 RRSPAARSASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYV 180
Query: 188 AFEDPDAAERACIELNGKELVEGKPLYV 271
+++ + AE++ ++G + ++G ++V
Sbjct: 181 EYDNLEDAEKSIKHMDGGQ-IDGMAVHV 207
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 29.9 bits (64), Expect = 0.98
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 170 RGFGFVAFEDPDAAERACIELNG 238
+GFGFV F + +A+ +C LNG
Sbjct: 119 QGFGFVQFNEAGSADESCRSLNG 141
>Z35637-3|CAA84689.1| 244|Caenorhabditis elegans Hypothetical
protein C03C10.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 2.3
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Frame = +2
Query: 203 DAAERACIELNGKELVEGKPLYVGR--AQKKAERQKELKRKFEQLKSERLTRYQGVNLYV 376
+ A R C+E NG + + +P Y + + Q EL E ER Y +
Sbjct: 157 EMALRKCLEENGSAIKKSRPYYERKEVLTRTMNSQLELMSILEHEVQERKDSYSDSMRAL 216
Query: 377 KNLDDTIDDER 409
+ + D I ER
Sbjct: 217 EQISDQIHQER 227
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 28.3 bits (60), Expect = 3.0
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 80 DFS---DEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIELN 235
DFS DE + + + G+ +H V+Y+D + F FE+ E C++++
Sbjct: 902 DFSKEIDERIGEFIDHTGKRPAHIVVYRDGLSEGDFQKYLFEERVCIEERCLKID 956
>AF016422-6|AAY86271.1| 128|Caenorhabditis elegans Hypothetical
protein R09E12.9 protein.
Length = 128
Score = 28.3 bits (60), Expect = 3.0
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 86 SDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDA 208
++ +LK FEKYG++ +V + +G G + +D +A
Sbjct: 9 AEALLKPQFEKYGKLVDDEVWAEVEGYYHPNGVLVHKDKEA 49
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical protein
T13H2.5a protein.
Length = 2471
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 275 RAQKKAERQKEL-KRKFEQLKSERLTR 352
RAQ+KA+ QKEL R+ EQ + E L R
Sbjct: 1257 RAQQKAQTQKELAARQAEQARVEELAR 1283
>Z77132-4|CAB00862.3| 536|Caenorhabditis elegans Hypothetical
protein F54D1.4 protein.
Length = 536
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 258 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 151
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>Z73906-2|CAA98115.1| 586|Caenorhabditis elegans Hypothetical
protein D2030.2a protein.
Length = 586
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 249 TSSLPFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSN 109
T++ P ++Q+ SK KP P PS+ YI + YF+N
Sbjct: 61 TNAPPNKAVQSFGQCRHCSKPLKPLPTLTPSNRYIHCDSCNKLYFAN 107
>Z70750-1|CAA94736.2| 362|Caenorhabditis elegans Hypothetical
protein C50F4.1 protein.
Length = 362
Score = 27.5 bits (58), Expect = 5.2
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +2
Query: 32 EKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN 166
EK + T+ Y++++ ++ +DE K +GR+T+ + +DGN
Sbjct: 190 EKVGILTH-YLEDWKDEDADEKEKHNVIAHGRLTAEICRFDEDGN 233
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 27.5 bits (58), Expect = 5.2
Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 1/111 (0%)
Frame = +2
Query: 5 RKXREKELGEKAKLFTNVYVKN-FGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFG 181
RK RE EL + F N + D + + ++ + ++K+ +K++ R
Sbjct: 86 RKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQDEQFRNNKIRFKNEEMDRTLK 145
Query: 182 FVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLK 334
+ ++ R I+ E E K + ++ +RQ+E+ R+FE++K
Sbjct: 146 YQQAQEEHTLRRQKID----EEFEEKCQKLN--EEAQQRQREMNRQFEEIK 190
>U32305-18|AAK18852.2| 719|Caenorhabditis elegans Hypothetical
protein B0336.3 protein.
Length = 719
Score = 27.5 bits (58), Expect = 5.2
Identities = 30/124 (24%), Positives = 53/124 (42%), Gaps = 1/124 (0%)
Frame = +2
Query: 35 KAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDG-NSRGFGFVAFEDPDAA 211
++K+ + V V+ ++ +++ M EK+G + H V DDG + F F D A
Sbjct: 606 QSKMSSVVIVRGVTDELVTDLMAHM-EKFGEVFDHSVKADDDGLITAVFPFRKTGDALKA 664
Query: 212 ERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDD 391
LNG +L + K ER +E+ + +++L NL DD
Sbjct: 665 MADGKVLNGVDL---------EMELKTERIEEIPSTDTNMSADQLLAAIPSNLESDEEDD 715
Query: 392 TIDD 403
++D
Sbjct: 716 LLND 719
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 27.5 bits (58), Expect = 5.2
Identities = 27/74 (36%), Positives = 36/74 (48%)
Frame = -3
Query: 237 PFNSMQALSAASGSSKATKPKPLELPSSLYITL*LVMRPYFSNISFNISSEKSSPKFFTY 58
P NS SAA+ S+ T P P E P+S TL V+ P+ +S +S K T
Sbjct: 216 PPNSPGTSSAATTSAPVTSPAPTE-PAS---TLGPVVIPW--------NSPGTSSKATTS 263
Query: 57 TLVNSLAFSPSSFS 16
V SL P++FS
Sbjct: 264 ATVTSLVLGPTTFS 277
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 27.5 bits (58), Expect = 5.2
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +2
Query: 38 AKLFTNVYVKNFGE---DFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDA 208
A+ N VK F E D+S E L++ +++ +++Y GN+ V + PDA
Sbjct: 361 AEKHKNSEVKLFVEKLPDWSTEQLEEKLRNEFKLSDFQLLYDYKGNNLRSAIVLLKYPDA 420
Query: 209 AERACIELNGKELVEGK 259
C + V GK
Sbjct: 421 I-NLCNSIRSNPTVFGK 436
>AF083225-1|AAD03683.1| 536|Caenorhabditis elegans nuclear receptor
NHR-7 protein.
Length = 536
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 258 LPSTSSLPFNSMQALSAASGSSKATKPK-PLELPSSL 151
+PSTSS P NS S +S ++ PK PLE+ S+
Sbjct: 447 MPSTSSYPANSSPFQSPYRPNSLSSFPKIPLEMTKSI 483
>AF040657-1|AAB95054.1| 758|Caenorhabditis elegans Hypothetical
protein T20H9.6 protein.
Length = 758
Score = 27.5 bits (58), Expect = 5.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 359 GVNLYVKNLDDTIDDERLRKEFAPFGTITSAKV 457
G++L TID E L EF FGT T A++
Sbjct: 81 GIHLRHGITKGTIDSEELISEFLNFGTTTPAQI 113
>AF016449-13|AAG24003.1| 350|Caenorhabditis elegans Serpentine
receptor, class t protein8 protein.
Length = 350
Score = 27.5 bits (58), Expect = 5.2
Identities = 11/60 (18%), Positives = 31/60 (51%)
Frame = -2
Query: 241 FAIQFNASSFSSIWVFKSNKTKASRIAIIFVHNFVTCNATIFLKHIF*HFIRKVFSKVLY 62
+ + F +SIW++K+ + + ++ V + + C F+K+++ + S++L+
Sbjct: 219 YHLLFKFGYSTSIWLYKTRRQIIFQALMLCVFHGIVCGIYEFMKYVYFSHTLVILSQLLW 278
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 281 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERLRKE 421
Q+ ER+K++ FE+ K E+L R + L+ KN + E+ +E
Sbjct: 256 QQNQEREKQINDDFEKRKLEKLQREK---LFEKNKQAKLQREKAHQE 299
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 281 QKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDE 406
Q+ ER+K++ FE+ E+L R + + + + I+D+
Sbjct: 227 QQNQEREKQINEDFEKRNQEKLKREEEIKQQNQEREKQINDD 268
>Z73103-5|CAA97422.1| 380|Caenorhabditis elegans Hypothetical
protein C08F8.6 protein.
Length = 380
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 239 KELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 346
KE+VE K + +KK E+++E K K+E K E L
Sbjct: 349 KEIVEEK-----KEEKKEEKKEEKKEKYEDDKKEEL 379
>Z49073-4|CAA88889.1| 1143|Caenorhabditis elegans Hypothetical protein
ZK970.5 protein.
Length = 1143
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +2
Query: 314 RKFEQLKSERLTRY--QGVNLYVKNLDDTIDDERLRK 418
RK LT Y + V+ YV+NL D DDE +R+
Sbjct: 1097 RKIASFTDSELTNYSFRSVSPYVENLSDN-DDEEIRR 1132
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore
complex protein protein7 protein.
Length = 1217
Score = 27.1 bits (57), Expect = 6.9
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = -3
Query: 252 STSSLPFNSMQALSAASGSSKATKPKPLELPSSL 151
+++++PF S +++ G+ K T P P +P+++
Sbjct: 615 TSNTIPFGSGSSVAPLFGAPKTTAPPPTTVPATI 648
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 27.1 bits (57), Expect = 6.9
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +2
Query: 203 DAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKN 382
++ E+A I+ +E V+G+P GR AER +E+ +K ++ + R + KN
Sbjct: 172 NSEEKALIQ---QEAVKGEPKNRGRPCGAAERSREVVKKLQKQPPRKRGRPLKI---AKN 225
Query: 383 LDDTIDDERLRKE--FAPFGTITS 448
++ I+ ++ K+ P T+ S
Sbjct: 226 MEPEINQKKDTKQVHVCPICTLAS 249
>AF003136-10|AAK21378.2| 1281|Caenorhabditis elegans High incidence of
males (increasedx chromosome loss) protein 1, isoform a
protein.
Length = 1281
Score = 27.1 bits (57), Expect = 6.9
Identities = 15/42 (35%), Positives = 29/42 (69%)
Frame = +2
Query: 278 AQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDD 403
A+KKA+R ++++FE++K++R R+Q + + +TIDD
Sbjct: 1087 ARKKAKR---IRQQFEKVKTDRYRRFQD---FFDPVANTIDD 1122
>AC006605-3|AAK85442.1| 933|Caenorhabditis elegans Hypothetical
protein C07H6.4 protein.
Length = 933
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 50 TNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMY 151
TNVYV N +++ L F +G + + K++Y
Sbjct: 200 TNVYVSNIPHSVTEDDLLFTFGSFGPLAALKILY 233
>Z36752-3|CAA85325.1| 422|Caenorhabditis elegans Hypothetical
protein F35H8.3 protein.
Length = 422
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 266 YVGRAQKKAERQKELKRKFEQLKSER 343
Y + QK+ +RQ+E +RK E L +ER
Sbjct: 392 YSNQVQKQMQRQRENRRKQELLIAER 417
>U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 7 protein.
Length = 348
Score = 26.6 bits (56), Expect = 9.1
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -1
Query: 356 DNELGVQISVVQTYASTPFDVQLSFVHVQHREAYPQLAL 240
++ L + + + Y+ST F + + FVHV +Y + +
Sbjct: 221 NSTLAAKFQLEEVYSSTKFSISVIFVHVTFFGSYTTITI 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,897,604
Number of Sequences: 27780
Number of extensions: 160993
Number of successful extensions: 997
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 828
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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