Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31562
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 2e-21
SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 9e-19
SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10) 75 5e-14
SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05) 71 6e-13
SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.) 68 5e-12
SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 1e-07
SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8) 49 3e-06
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_36121| Best HMM Match : CH (HMM E-Value=0.0017) 42 4e-04
SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09) 38 0.006
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 36 0.020
SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05) 36 0.026
SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.24
SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.43
SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022) 29 1.7
SB_55420| Best HMM Match : fn3 (HMM E-Value=0) 29 1.7
SB_15403| Best HMM Match : CH (HMM E-Value=0) 29 1.7
SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_54206| Best HMM Match : SET (HMM E-Value=0.029) 28 4.0
SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 4.0
SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 5.3
SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012) 28 5.3
SB_42674| Best HMM Match : DUF26 (HMM E-Value=1) 28 5.3
SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 27 9.2
>SB_40412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 99.1 bits (236), Expect = 2e-21
Identities = 58/133 (43%), Positives = 81/133 (60%), Gaps = 4/133 (3%)
Frame = +2
Query: 116 WIEGVLGAKFPPGELFED----VLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITN 283
WIEG+LG + G+ D VLKDG VLC++ NKL G KIN++ FKMMEN
Sbjct: 75 WIEGILGERVFGGKTGADDVHEVLKDGQVLCRVANKL--GGNIKINSSKMAFKMMENTGK 132
Query: 284 FQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCLGPKPADEC 463
F GVP D+FQTVDL+EK+++ V++ + ALGR+ + + + LGPK A
Sbjct: 133 FLEFCDTIGVPKTDMFQTVDLYEKQNMPGVINGIHALGRKAHSTGK-TCLALGPKEASAN 191
Query: 464 KRDFSDEVLKAGQ 502
R+F++E +AGQ
Sbjct: 192 PREFTEEQRRAGQ 204
>SB_40413| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 603
Score = 90.2 bits (214), Expect = 9e-19
Identities = 62/161 (38%), Positives = 86/161 (53%), Gaps = 5/161 (3%)
Frame = +2
Query: 44 LWNVKFALRSLPSATLRRRRKPKXWIEGVLGAKF--PPG--ELFEDVLKDGTVLCQLINK 211
+W VK + S T + + + WI+ VLG G + LKDG VLC+L N+
Sbjct: 417 VWVVKAGIDSKYDPT--KEEEARKWIDTVLGESIFGENGGVDTVHQTLKDGQVLCRLANR 474
Query: 212 LKPGSVPKINTTGGQFKMMENITNFQSAIKA-YGVPDIDVFQTVDLWEKKDIAQVVSTLF 388
L G KIN FK MENI NF S I+ GV D+FQTVDL+EK ++ V+ +
Sbjct: 475 L--GGDLKINQQKMPFKQMENIGNFLSFIENNLGVAKNDLFQTVDLYEKSNMWNVICCIH 532
Query: 389 ALGRETYRHAEWSGPCLGPKPADECKRDFSDEVLKAGQTVI 511
A+GR Y + P LGPK + + R F++ L G+T+I
Sbjct: 533 AVGRRAYSLGK-DVPQLGPKESTKNPRQFTERQLNEGKTII 572
>SB_7905| Best HMM Match : CH (HMM E-Value=1.3e-10)
Length = 172
Score = 74.5 bits (175), Expect = 5e-14
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
Frame = +2
Query: 56 KFALRSLPSATLRRRRKPKXWIEGVLGAKF--PPGELFEDVLKDGTVLCQLINKLKPGSV 229
KF + P + R + + WIEG F + F++ LK G VLC+L N ++PG++
Sbjct: 54 KFIMSKKPWP-MDRAKVVRMWIEGKTSCNFGGDTADDFQNTLKSGVVLCKLANAIQPGAI 112
Query: 230 PKINTTGGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 373
KIN F MMENI NF + ++ GV F T+DL+E K++ QV
Sbjct: 113 KKINNAKMNFMMMENIENFCNFVQTKGVASQYQFVTIDLFEGKNMHQV 160
>SB_18673| Best HMM Match : CH (HMM E-Value=2.5e-05)
Length = 195
Score = 70.9 bits (166), Expect = 6e-13
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Frame = +2
Query: 92 RRRRKPKXWIEGVLGAK-FPPGELFEDV---LKDGTVLCQLINKLKPGSVPKINTTGGQF 259
++ + + WIE VLG K F E +DV LKDG +L +L KL G+ K+N F
Sbjct: 25 QQEEEARIWIEAVLGEKVFGGAEGPDDVQKVLKDGKILARLAIKL--GAKIKVNEQNMPF 82
Query: 260 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCL 439
K MENI NF S GV D FQT DL+ D A + S + P L
Sbjct: 83 KQMENIGNFLSHCGHLGVASGDQFQTADLY---DNANMTSCQLIKDLDI--------PTL 131
Query: 440 GPKPADECKRDFSDEVLKAGQTVI 511
GPK A+ R+F++E L+AG++++
Sbjct: 132 GPKEAEANVREFTEEQLRAGESIL 155
>SB_39070| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 539
Score = 67.7 bits (158), Expect = 5e-12
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Frame = +2
Query: 149 PGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNF-QSAIKAYGVPDID 325
PGE F + L+ G +LC++ NK+K ++PKI + F M ENI+ F + G+ ++
Sbjct: 301 PGETFAEPLRSGVILCKIANKIKSNAIPKIGESNKSFVMQENISKFLDFCERVLGLDRLN 360
Query: 326 VFQTVDLWEKKDIAQV 373
+FQTVDL+E++++ V
Sbjct: 361 LFQTVDLFERQNVGMV 376
Score = 37.1 bits (82), Expect = 0.009
Identities = 21/64 (32%), Positives = 39/64 (60%), Gaps = 6/64 (9%)
Frame = +2
Query: 200 LINKLKPGSVPKIN-TTGGQF---KMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKD 361
++N++ PG++ KI+ GG+F +++ENI F A + + +D+F DL+EK +
Sbjct: 203 VMNEVFPGAISKIHGINGGRFHGFQILENIEKFLKACQGEPFNCNVVDLFSPGDLYEKNN 262
Query: 362 IAQV 373
+ QV
Sbjct: 263 VGQV 266
>SB_20280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 263
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Frame = +2
Query: 161 FEDVLKDGTVLCQLINKLKPGSVPKINTTG--GQFKMMENITNFQSA-IKAYGVPDIDVF 331
F L+DG +LCQ+ N L PG+V + QF ++NI NF +A + + + D D+F
Sbjct: 51 FAQSLRDGVLLCQVANVLHPGAVVDVGMKPQMSQFMCLKNIRNFLTACTRLFNLADGDLF 110
Query: 332 QTVDLWEKKDIAQVVSTLFAL 394
+L++ D +VV+TL L
Sbjct: 111 DANELYDVSDFGKVVNTLSKL 131
>SB_23839| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Frame = +2
Query: 206 NKLKPGSVPKINTTGGQ--FKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDI 364
N ++PG + K + G+ FKMMENI F + IK+YGV + +F TVDL+EK+++
Sbjct: 189 NAIQPGVIKKPHLNPGKMGFKMMENIGWFVNFIKSYGVQEEYIFVTVDLYEKRNV 243
>SB_18675| Best HMM Match : NUMOD3 (HMM E-Value=8)
Length = 89
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/83 (36%), Positives = 46/83 (55%)
Frame = +2
Query: 260 KMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETYRHAEWSGPCL 439
+ MENI NF ++ GV +D+FQTVDL+EK+++A R + P L
Sbjct: 16 RKMENIGNFLLFCESLGVSKVDLFQTVDLYEKQNMAAA------------RAKGLNCPQL 63
Query: 440 GPKPADECKRDFSDEVLKAGQTV 508
GPK A+ R F ++ L+AG+ +
Sbjct: 64 GPKEAEANPRSFDEDKLRAGKGI 86
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Frame = +2
Query: 224 SVPKINTTGGQFKMMENITNFQSAIKA--YGVPDIDVFQTVDLWEKKDIAQVVSTLFALG 397
+ P N M ENI NF +A + + D+FQTV L+E++++ QV+S + A
Sbjct: 884 NTPSTNRKSTSLGMQENIANFLNACQEEPFNCNPQDLFQTVYLFERQNLGQVISGIQAFA 943
Query: 398 RETYRH 415
R+ +H
Sbjct: 944 RKVRKH 949
>SB_36121| Best HMM Match : CH (HMM E-Value=0.0017)
Length = 209
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/81 (32%), Positives = 40/81 (49%)
Frame = +2
Query: 110 KXWIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQ 289
+ WIE F + F + L DG +LC+LI + SV +IN G +N++ F
Sbjct: 34 RRWIERATFTPFKNDD-FRESLADGVLLCELIVNVANISVGRINKQGTAHAGRDNLSVFF 92
Query: 290 SAIKAYGVPDIDVFQTVDLWE 352
A +A G+ +F+ DL E
Sbjct: 93 RACEALGLDKYQLFEHEDLDE 113
>SB_28994| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 422
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Frame = +2
Query: 173 LKDGTVLCQLINKLKPGSVPKINTTGG------QFKMMENITNFQSAIKAYGVPDIDVFQ 334
L DG VLC L+N G++P I+ K M+N+ F A K GV +
Sbjct: 336 LADGVVLCHLVNSAYKGTIPSIHIPSAGVPKLTMTKCMKNVDYFLEACKKLGVDRELLCS 395
Query: 335 TVDLWEKKDIAQVVSTLFAL 394
+ D+ ++K +V +T+ AL
Sbjct: 396 SADILQEKSPQRVCATVQAL 415
>SB_17658| Best HMM Match : GAS2 (HMM E-Value=6.9e-09)
Length = 959
Score = 37.5 bits (83), Expect = 0.006
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 22/121 (18%)
Frame = +2
Query: 116 WIEGVLGAKFPPGELFEDVLKDGTVLCQLINKLKP---------------GSVPKINTT- 247
WI +LG + + F +L G VLC+L N ++ G P T
Sbjct: 35 WISRLLGEEELNTDTFTSMLDTGVVLCRLANFIQTVGEEFFVRNPKFPRRGLFPACGVTY 94
Query: 248 ------GGQFKMMENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQVVSTLFALGRETY 409
G F +N++NF + VPD+ +F+T DL K+ V+ TL + R+ +
Sbjct: 95 KQRGATHGSFVARDNVSNFIRWCRELRVPDVIMFETEDLVLNKNEKTVLLTLLEVARKAF 154
Query: 410 R 412
+
Sbjct: 155 K 155
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 35.9 bits (79), Expect = 0.020
Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 2/95 (2%)
Frame = +2
Query: 38 TCLWNVKFALRSLPSATLRRRRKPKXWIEGVLGAKFPPGEL--FEDVLKDGTVLCQLINK 211
T +WN+ L +A +R+ G+ P ++ F+ +DG +C+L+N
Sbjct: 406 TLVWNLIEHFLLLQAAKCSGKRRAPRNASYSTGSVLPHRDINNFDTDWRDGMAICELVNA 465
Query: 212 LKPGSVPKINTTGGQFKMMENITNFQSAIKAYGVP 316
L+PG +P Q+A A+G+P
Sbjct: 466 LQPGLIPDSKYKEKTNSEATAKIGIQTAHDAFGIP 500
>SB_4896| Best HMM Match : TFIID_20kDa (HMM E-Value=2.3e-05)
Length = 819
Score = 35.5 bits (78), Expect = 0.026
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +2
Query: 266 MENITNFQSAIKAYGVPDIDVFQTVDLWEKKDIAQV 373
M I F +GV D+FQTVDL+EK++I QV
Sbjct: 700 MVTIAKFLDFCGTFGVAKSDLFQTVDLYEKQNIQQV 735
>SB_2620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 37
Score = 32.3 bits (70), Expect = 0.24
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2
Query: 431 PCLGPKPADECKRDFSDEVLKAGQTVI 511
P LGPK A+ R+F++E L+AG++++
Sbjct: 10 PTLGPKEAEANVREFTEEQLRAGESIL 36
>SB_53975| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 31.5 bits (68), Expect = 0.43
Identities = 16/27 (59%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +2
Query: 116 WIEGVLGAKFPPGE-LFEDVLKDGTVL 193
WIE VLG K G+ + EDVLKDG +L
Sbjct: 16 WIEKVLGEKVCQGKSINEDVLKDGQIL 42
>SB_58465| Best HMM Match : zf-B_box (HMM E-Value=0.00022)
Length = 476
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 166 GCPQGRHCSLPAHQQAEAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCTRHRCVPNRRS 345
G QG C L + +++ + TVQ + EH K+ + ++I + + +
Sbjct: 267 GKHQGHRCDLASRLATNV----REELSKITVQIEEEHEKIVMARRAIEARKEAITQKKEA 322
Query: 346 MGEK-RHRPSSQHTV 387
+G+K H+ S TV
Sbjct: 323 LGQKIAHQASGIRTV 337
>SB_55420| Best HMM Match : fn3 (HMM E-Value=0)
Length = 789
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 59 FALRSLPSA-TLRRRRKPKXWIEGVLGAKFPPGEL---FEDVLKDGTVLCQLINKLKPGS 226
+ +R P+ T RRRR+ + +GV+ K G F+D+ KD +L+ G+
Sbjct: 609 YIIRLTPTEETRRRRRRSVEYSDGVISVKVSKGTTSYEFKDLEKDTVYCAELLAFTAAGT 668
Query: 227 VPKINTTGGQFKMMENI 277
+ G + +ENI
Sbjct: 669 GNGTSCVMGHTQSLENI 685
>SB_15403| Best HMM Match : CH (HMM E-Value=0)
Length = 1907
Score = 29.5 bits (63), Expect = 1.7
Identities = 23/76 (30%), Positives = 38/76 (50%)
Frame = +2
Query: 2 STLGKKHSHNHTTCLWNVKFALRSLPSATLRRRRKPKXWIEGVLGAKFPPGELFEDVLKD 181
S G KHSH+ V FA +++L+ ++ + A +L+E V KD
Sbjct: 34 SAEGTKHSHSKEE---QVAFA--DWINSSLKEDESVHKYLP--IDASEDSSDLYEKV-KD 85
Query: 182 GTVLCQLINKLKPGSV 229
G +LC++IN PG++
Sbjct: 86 GILLCKMINLSAPGTI 101
>SB_58953| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 377
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 437 LGPKPADECKRDFSDEVLKAGQTVIG 514
LGP P+D+ RDF L++GQ V G
Sbjct: 233 LGPDPSDKKVRDFIWNTLQSGQVVPG 258
>SB_54206| Best HMM Match : SET (HMM E-Value=0.029)
Length = 160
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/37 (43%), Positives = 19/37 (51%)
Frame = +1
Query: 253 TVQNDGEHHKLPVCNQSIRCTRHRCVPNRRSMGEKRH 363
TVQ D E H LP N S T H C PN + + R+
Sbjct: 44 TVQVDKEKHILPASNLSY--TNHSCDPNAEFVFKPRN 78
>SB_28876| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 356
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -1
Query: 429 PLHSACL*VSRPRANSVLTTWAMSFFSHRSTVWNTSMSGTPYALIADW 286
PLH+ L SR R + TW ++FF+ ++ ++ + DW
Sbjct: 134 PLHAGTLITSRRRYFLIAATWVIAFFNASPLLYTMTLDNNNLCQL-DW 180
>SB_31112| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 2532
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +2
Query: 116 WIEGVLGAKF--PPGELFEDVLKDGTVLCQLINKLKPGSVP 232
++ G +G K+ PP FE +L+ T +I L PGS P
Sbjct: 1904 FVTGRMGEKYVTPPVLSFESILEQSTPFSPIIFILSPGSDP 1944
>SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5222
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = +1
Query: 169 CPQGRHCSLPAHQQA--EAWLCPQDQHHRWTVQNDGEHHKLPVCNQSIRCT 315
CP G +C H + W CP+ H W G + + +CT
Sbjct: 917 CPAGHYCIDGKHPEPCPAGWYCPEGTGHDWQPCPRGTYSPAQYLSHLGQCT 967
>SB_29928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 122 EGVLGAKFPPGELFEDVLKDGTVLCQLINKLKPGSVPKINTTG 250
+G LGA F P +LF + + + ++N G V + TG
Sbjct: 73 QGSLGANFDPSKLFYGYMANLNIWANVLNDFNRGKVYEQGCTG 115
>SB_47464| Best HMM Match : RVT_1 (HMM E-Value=0.012)
Length = 558
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 390 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 503
PS +R+ D + P + P+T V + S +PGK
Sbjct: 20 PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 57
Score = 27.9 bits (59), Expect = 5.3
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +3
Query: 390 PSVVRLTDTRNGAAPASDPSPLTNANVTFLMKS*RPGK 503
PS +R+ D + P + P+T V + S +PGK
Sbjct: 467 PSTIRILDVCSNTTPCRELRPVTEGQVLKELHSLKPGK 504
>SB_42674| Best HMM Match : DUF26 (HMM E-Value=1)
Length = 493
Score = 27.9 bits (59), Expect = 5.3
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 131 LGAKFPPGELFEDV--LKDGTVLCQLINKLKPGSVPKINTTGGQFKMMENITNFQSAIKA 304
L A PP DV L GT L LKP PK+ G + + +I F S++ A
Sbjct: 89 LMATLPPTSTAHDVERLSTGTKFA-LRQWLKPIVAPKVCNNTGLHRPVAHIPPFTSSVAA 147
Query: 305 YGVPDIDVFQTVDLWEKKDIAQVVST 382
G I + W D ++++ +
Sbjct: 148 QGKAPIKSVSALS-WPGTDQSEIMDS 172
>SB_59669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3511
Score = 27.1 bits (57), Expect = 9.2
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +1
Query: 214 EAWLCPQDQHHRWTVQNDGEHHKL 285
EAWLC ++ RWT++ +H +L
Sbjct: 952 EAWLCDVERSMRWTLKELLKHCRL 975
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 27.1 bits (57), Expect = 9.2
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 1 LNTRXKALTQSHNMSLERQVRAKIASKRNPEKEKE 105
LNT+ A+ SH LE +V+ K S RN E E E
Sbjct: 799 LNTKLDAVEDSHRRELELRVQQK--SVRNTELELE 831
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +1
Query: 169 CPQGRHCSLPAHQQAEAWLCP 231
CP G C + +Q E+W CP
Sbjct: 124 CPPGFWCKRSSQEQDESWGCP 144
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,085,114
Number of Sequences: 59808
Number of extensions: 415737
Number of successful extensions: 1156
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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