Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31561
(516 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 125 3e-31
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 1.4
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 10.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 10.0
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 10.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 10.0
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 125 bits (301), Expect = 3e-31
Identities = 58/61 (95%), Positives = 61/61 (100%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTMYPGIADRMQKEITALAPST+KIKIIAPPE+KYSVWIGGSILASLSTFQQMWI
Sbjct: 73 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWI 132
Query: 336 S 334
S
Sbjct: 133 S 133
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.4 bits (48), Expect = 1.4
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +1
Query: 160 DGVRLDVQFSGITRYNVLTVAFRTRTSTTPHSTGVT 267
D +LD F T+ N + ++ R++ STT G T
Sbjct: 354 DSAKLDKIFDIATKENAMLLSGRSQKSTTGPPPGPT 389
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 1.9
Identities = 11/42 (26%), Positives = 19/42 (45%)
Frame = -3
Query: 514 HVRWYHHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRM 389
H++ +HH + + HRP Q Q + R+E R+
Sbjct: 143 HLQNHHH--HLQSTAVQDHHRPYQQQQQQQQRQQQRQEERRL 182
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 20.6 bits (41), Expect = 10.0
Identities = 6/19 (31%), Positives = 11/19 (57%)
Frame = -3
Query: 415 SPREEVLRMDRWIHPGFPV 359
+P + + + WIHP P+
Sbjct: 531 NPLTDTVPIHTWIHPWLPL 549
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 10.0
Identities = 10/39 (25%), Positives = 19/39 (48%)
Frame = -3
Query: 499 HHVPRYRRQDAEGDHRPRALDHQDQDHRSPREEVLRMDR 383
HH R+R+ +E Q++ R RE +++ +R
Sbjct: 10 HHDERFRQSRSEDSETGLRSRTQEERLRRRREWMIQQER 48
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,945
Number of Sequences: 438
Number of extensions: 2174
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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