Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31561
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 151 4e-37
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 151 4e-37
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 151 4e-37
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 151 4e-37
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 150 6e-37
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 150 6e-37
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 145 1e-35
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 145 1e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 134 3e-32
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 128 3e-30
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 118 2e-27
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 108 2e-24
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 85 2e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 71 4e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 62 2e-10
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 59 2e-09
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 47 7e-06
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 46 1e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 0.001
At5g43500.2 68418.m05318 expressed protein 30 0.80
At5g43500.1 68418.m05319 expressed protein 30 0.80
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 5.7
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 27 7.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 27 7.5
At5g56690.1 68418.m07076 F-box family protein contains F-box dom... 27 9.9
At3g50690.1 68416.m05546 leucine-rich repeat family protein 27 9.9
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 151 bits (365), Expect = 4e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
SK EYDESGP IVHRKC
Sbjct: 360 SKSEYDESGPSIVHRKC 376
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 151 bits (365), Expect = 4e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDESGP IVHRKC
Sbjct: 360 AKAEYDESGPSIVHRKC 376
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 151 bits (365), Expect = 4e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDESGP IVHRKC
Sbjct: 360 AKAEYDESGPSIVHRKC 376
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 151 bits (365), Expect = 4e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDESGP IVHRKC
Sbjct: 360 AKAEYDESGPSIVHRKC 376
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 150 bits (363), Expect = 6e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
SK EYDE+GPGIVHRKC
Sbjct: 360 SKAEYDEAGPGIVHRKC 376
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 150 bits (363), Expect = 6e-37
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
SK EYDE+GPGIVHRKC
Sbjct: 360 SKAEYDEAGPGIVHRKC 376
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (352), Expect = 1e-35
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDESGP IVHRKC
Sbjct: 360 AKAEYDESGPSIVHRKC 376
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 145 bits (352), Expect = 1e-35
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI
Sbjct: 300 VLSGGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI 359
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDESGP IVHRKC
Sbjct: 360 AKAEYDESGPSIVHRKC 376
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 134 bits (325), Expect = 3e-32
Identities = 59/77 (76%), Positives = 68/77 (88%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI
Sbjct: 301 VLSGGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWI 360
Query: 336 SKEEYDESGPGIVHRKC 286
+K EYDE G IVHRKC
Sbjct: 361 TKAEYDEQGGAIVHRKC 377
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 128 bits (308), Expect = 3e-30
Identities = 56/77 (72%), Positives = 68/77 (88%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI
Sbjct: 252 VLSGGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWI 311
Query: 336 SKEEYDESGPGIVHRKC 286
+K EY+E+GP IVH KC
Sbjct: 312 TKAEYEENGPAIVHTKC 328
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 118 bits (285), Expect = 2e-27
Identities = 51/77 (66%), Positives = 64/77 (83%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
+M+GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI
Sbjct: 289 LMTGGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWI 348
Query: 336 SKEEYDESGPGIVHRKC 286
+K+EY+E G IVHRKC
Sbjct: 349 TKDEYEEHGAAIVHRKC 365
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 108 bits (260), Expect = 2e-24
Identities = 50/62 (80%), Positives = 58/62 (93%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
V+SGGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I
Sbjct: 300 VLSGGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKI 359
Query: 336 SK 331
+
Sbjct: 360 DQ 361
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 85.4 bits (202), Expect = 2e-17
Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 3/80 (3%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQ 346
+++GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQ
Sbjct: 361 LLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQ 420
Query: 345 MWISKEEYDESGPGIVHRKC 286
MW SK EY+E G + RKC
Sbjct: 421 MWFSKSEYEEHGASYIQRKC 440
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.3 bits (167), Expect = 4e-13
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGSILASLST 355
V+ GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA +
Sbjct: 281 VLCGGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVF 339
Query: 354 FQQMWISKEEYDESGPGIVHRKC 286
Q ++K +YDE+GP +VHRKC
Sbjct: 340 PQNQHVTKADYDETGPSVVHRKC 362
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 62.1 bits (144), Expect = 2e-10
Identities = 26/76 (34%), Positives = 45/76 (59%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
+++GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M +
Sbjct: 343 ILTGGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCV 402
Query: 336 SKEEYDESGPGIVHRK 289
+K EY+E G R+
Sbjct: 403 TKAEYEELGSARCRRR 418
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 12/81 (14%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSIL 370
V+SGG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++L
Sbjct: 299 VLSGGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVL 358
Query: 369 AS-LSTFQQMWISKEEYDESG 310
A + + WI++E+Y E G
Sbjct: 359 AGIMKDAPEFWINREDYMEEG 379
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 47.2 bits (107), Expect = 7e-06
Identities = 21/68 (30%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQM 343
V++GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS F
Sbjct: 396 VLTGGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGP 455
Query: 342 W-ISKEEY 322
W I+++++
Sbjct: 456 WCITRKQF 463
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTI----------------KIKIIAPPERKYSVWI 385
V+SGG+TM+ R+Q+++ + + + ++ +++ P ++++VW
Sbjct: 329 VLSGGSTMFKDFGRRLQRDLKKIVDARVLANNARTGGEITSQPVEVNVVSHPVQRFAVWF 388
Query: 384 GGSILASLSTFQQMWISKEEYDESGPGI 301
GGS+L+S F +KEEY+E G I
Sbjct: 389 GGSVLSSTPEFFASCRTKEEYEEYGASI 416
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/69 (27%), Positives = 34/69 (49%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWI 337
+M+GG ++ PG+ +R++ I + P I ++ + W G S A+ F
Sbjct: 642 LMTGGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAF 701
Query: 336 SKEEYDESG 310
+K +YDE G
Sbjct: 702 TKMDYDEKG 710
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQMW 340
GG + G+ +++ + P T I + + E ++ W GG+IL L ++ W
Sbjct: 490 GGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAW 549
Query: 339 ISKEEYDESG 310
I + ++ +G
Sbjct: 550 IERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 30.3 bits (65), Expect = 0.80
Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQMW 340
GG + G+ +++ + P T I + + E ++ W GG+IL L ++ W
Sbjct: 502 GGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREAW 561
Query: 339 ISKEEYDESG 310
I + ++ +G
Sbjct: 562 IERHQWMVNG 571
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 472 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 359
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 418
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 209 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 516 VMSGGTTMYPGIADRMQKEITALAPSTIKIKII 418
+ G + +Y G+ D QK I + T+ KI+
Sbjct: 416 INGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At5g56690.1 68418.m07076 F-box family protein contains F-box domain
Pfam:PF00646
Length = 402
Score = 26.6 bits (56), Expect = 9.9
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -1
Query: 462 EITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDE 316
EI+ L P + +KI+A K V I S+L+ F MW+ K +YD+
Sbjct: 3 EISGL-PDDLLVKILAFLPTK--VAISTSVLSKQWRFLWMWLPKLKYDD 48
>At3g50690.1 68416.m05546 leucine-rich repeat family protein
Length = 447
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -3
Query: 478 RQDAEGDHRPRALDHQDQDHRSPREE 401
+ DAEG+ RP + D D++ EE
Sbjct: 153 KTDAEGNERPESDDEDDEEDEEDEEE 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,096
Number of Sequences: 28952
Number of extensions: 163758
Number of successful extensions: 463
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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