Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31560
(516 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggeri... 24 0.70
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 2.8
EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2 pr... 21 4.9
EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1 pr... 21 4.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 6.5
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 6.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 6.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 6.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 6.5
>EF222294-1|ABN79654.1| 451|Tribolium castaneum ecdysis triggering
hormone receptorisoform B protein.
Length = 451
Score = 24.2 bits (50), Expect = 0.70
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 385 VYVLRKVLVFFCF*LLISFVVY 320
V+ L +L+FF F L I +VY
Sbjct: 236 VFFLGSILIFFIFPLAILIIVY 257
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 2.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGK 184
P+ KP+TPF +L ++ K
Sbjct: 114 PNRKPRTPFTTQQLLALEKK 133
>EF125546-1|ABL73930.1| 237|Tribolium castaneum obstractor C2
protein.
Length = 237
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 368 FSKNVYPDMLKKLNSIVEANKRSHCC 445
FS++ +PD +K +E R + C
Sbjct: 169 FSRHAHPDDCRKYYICLEGTAREYGC 194
>EF125545-1|ABL73929.1| 274|Tribolium castaneum obstractor C1
protein.
Length = 274
Score = 21.4 bits (43), Expect = 4.9
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +2
Query: 368 FSKNVYPDMLKKLNSIVEANKRSHCC 445
FS++ +PD +K +E R + C
Sbjct: 169 FSRHAHPDDCRKYYICLEGTAREYGC 194
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 222 GCVLCSPGCFSLFR 235
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 536 GCVLCSPGCFSLFR 549
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 796 GCVLCSPGCFSLFR 809
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 796 GCVLCSPGCFSLFR 809
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 769 GCVLCSPGCFSLFR 782
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 769 GCVLCSPGCFSLFR 782
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 796 GCVLCSPGCFSLFR 809
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.0 bits (42), Expect = 6.5
Identities = 6/14 (42%), Positives = 8/14 (57%)
Frame = +1
Query: 460 GVISCSPACFDYLK 501
G + CSP CF +
Sbjct: 796 GCVLCSPGCFSLFR 809
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,319
Number of Sequences: 336
Number of extensions: 1751
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12363686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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