Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31560
(516 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 37 0.008
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 35 0.045
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 34 0.059
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 34 0.059
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 33 0.10
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 32 0.24
03_01_0249 - 1935355-1935827,1936129-1936330 31 0.55
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 30 0.96
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 29 1.7
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 29 2.2
06_01_0786 - 5881178-5881303,5881523-5881627,5882078-5882169,588... 29 2.9
09_04_0448 + 17692650-17692970,17693461-17693811 28 3.9
10_08_0272 - 16387422-16387427,16387428-16387526,16387688-163881... 28 5.1
07_03_1781 + 29468919-29468951,29469057-29469184,29469349-294694... 28 5.1
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 28 5.1
05_07_0042 - 27265687-27267159 27 6.8
03_05_0468 - 24630701-24631399 27 6.8
06_02_0292 - 13845537-13845553,13846185-13846201,13846393-13846628 27 8.9
03_06_0046 - 31263294-31263610,31263873-31264026,31265514-312655... 27 8.9
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 27 8.9
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 27 8.9
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 37.1 bits (82), Expect = 0.008
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Frame = +2
Query: 83 GQDFE----DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGAN 250
G DF+ D R + P F PFGQ+PVL + +S AI RY+ KY GA+
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGAD 89
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 34.7 bits (76), Expect = 0.045
Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Frame = +2
Query: 98 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAGA------NDEE 259
D + + P+ + PFGQMP +S A+ RY+ RKY + A N E
Sbjct: 35 DFKAMEHKSPEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANLLREGNLTE 94
Query: 260 AFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVE 421
A +D +E +H +++ YE A ++ V + L+KL ++E
Sbjct: 95 AAMVDIGIEVEIHQYYPVISSIVYECLFN-PAMYGVPTNQKVVDNSLEKLKKVLE 148
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 34.3 bits (75), Expect = 0.059
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 232
PD + PFGQ+P +S AICRY+ RK+
Sbjct: 44 PDHLARNPFGQVPAFQDGDLMLFESRAICRYILRKH 79
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 34.3 bits (75), Expect = 0.059
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 232
P+ + PFG++PVL QS AI RY+ RKY
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKY 79
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 33.5 bits (73), Expect = 0.10
Identities = 17/36 (47%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRK 229
PD + PFGQ+P L DG + +S AIC+Y+ RK
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRK 78
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 32.3 bits (70), Expect = 0.24
Identities = 32/116 (27%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
Frame = +2
Query: 98 DHRVLSADWPDFKPKTPFGQMPVLVIDGKQYA-QSTAICRYLGRKYG------LAGANDE 256
D V+ P+ + PFGQ+P DG Y +S AI +Y+ RKY L N
Sbjct: 35 DFTVMEHKSPEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLR 93
Query: 257 EAFEIDQNVEF-LHDIRAKAAAVYYEADEELKAKKHEDFSKNVYPDMLKKLNSIVE 421
EA +D E H + + + YE A + ++ V + +KL ++E
Sbjct: 94 EAAMVDVWTEVETHQYNSAISPIVYECIIN-PAMRGIPTNQKVVDESAEKLKKVLE 148
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYGLAG 244
P F PFGQ+P +S AICRY+ +Y +G
Sbjct: 45 PSFLKLQPFGQVPAFKDSLTTVFESRAICRYICDQYADSG 84
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 30.3 bits (65), Expect = 0.96
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 62 RMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 232
R++L G D+E V PD++ P +P LV + S AI YL KY
Sbjct: 21 RIVLNLKGVDYEYKSVNPRTDPDYEKINPIKYIPALVDGDLVVSDSLAIALYLEDKY 77
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGR---KYGLAGANDEEAFEIDQNVEF 289
P+F P G++PVL +S AI RY+ R L G++ + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDF 124
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 29.1 bits (62), Expect = 2.2
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 232
P+ + PFG++P L +S AI +Y+ RKY
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKY 79
>06_01_0786 -
5881178-5881303,5881523-5881627,5882078-5882169,
5882267-5882336,5882639-5882724,5882916-5883017,
5883375-5883597,5883693-5883758,5883896-5883986,
5884019-5884057,5885401-5885548,5885623-5885715,
5885782-5885886,5886645-5886826,5886912-5887084
Length = 566
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 148 RSLWLEVRPVSGEHAVVFEVLASVGEQHTAALPESLA 38
R LW+E RP G AV+ + A G PE A
Sbjct: 46 RLLWVETRPEEGGRAVLVKEAAEPGGDAVDVTPEGFA 82
>09_04_0448 + 17692650-17692970,17693461-17693811
Length = 223
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 155 QMPVLVIDGKQYAQSTAICRYL 220
++PVLV DGK A+ST I Y+
Sbjct: 55 KVPVLVHDGKPLAESTVIVEYI 76
>10_08_0272 -
16387422-16387427,16387428-16387526,16387688-16388122,
16388408-16388738,16390821-16390961,16391668-16391736,
16392077-16392312
Length = 438
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 63 VCCSPTEARTSKTTACSP 116
+CC P + R +K ACSP
Sbjct: 102 LCCQPFQGRRAKLNACSP 119
>07_03_1781 +
29468919-29468951,29469057-29469184,29469349-29469433,
29469771-29469824,29470072-29470163,29470280-29470383,
29470811-29470886,29471231-29471678,29471874-29471916,
29471977-29472209,29472302-29472505,29472595-29472693,
29472789-29472861,29473373-29473500,29473614-29473836,
29473992-29474215,29474296-29474423,29475053-29475167,
29475603-29475658,29475795-29475888,29475966-29476152,
29476229-29476309,29476384-29476484,29476567-29476629,
29476800-29476907
Length = 1059
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +2
Query: 5 KMPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLS 115
++P +V H+ + A G L YGG D VL+
Sbjct: 304 RLPVIVLHWSSRSADSNKGGHLFVYGGDDMGSEEVLT 340
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 27.9 bits (59), Expect = 5.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKYG 235
P + PFGQ+P +S AI +Y+ RK+G
Sbjct: 44 PPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHG 80
>05_07_0042 - 27265687-27267159
Length = 490
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 139 WLEVRPVSGEHAVVFEVLASVGEQHTAALPESLAS 35
WL+ +P V F L ++G TAA+ E L +
Sbjct: 275 WLDAQPPRSVVYVAFGSLVNIGRDETAAVAEGLVA 309
>03_05_0468 - 24630701-24631399
Length = 232
Score = 27.5 bits (58), Expect = 6.8
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Frame = +2
Query: 35 ACKALGESGRMLLAYGGQDFEDH-RVLSADWPDFKPKTPF-GQMPVLVIDGKQYAQSTAI 208
A G R+ LA G +E+ L+A P GQ+PVL++ GK +S I
Sbjct: 14 AVSMYGNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKPVCESLVI 73
Query: 209 CRYLGRKYGLAG 244
++ ++ G
Sbjct: 74 LEFIDEEFAGVG 85
>06_02_0292 - 13845537-13845553,13846185-13846201,13846393-13846628
Length = 89
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3
Query: 163 WHLTERSLWLEVRPVSGEHAVVFEV 89
W + +R W V PV+G H V+ E+
Sbjct: 62 WWIRQRRPWRHVDPVAGRHLVLGEL 86
>03_06_0046 -
31263294-31263610,31263873-31264026,31265514-31265551,
31265941-31266631
Length = 399
Score = 27.1 bits (57), Expect = 8.9
Identities = 19/70 (27%), Positives = 29/70 (41%)
Frame = -3
Query: 244 PGEPVLAAEVPADGGALSVLLAVDH*YWHLTERSLWLEVRPVSGEHAVVFEVLASVGEQH 65
P E + AA D A++ LLA H L + +G HA V ++L G
Sbjct: 13 PEELLCAAAESGDAEAITGLLAEGADPTHFDASGLTPLMHAATGGHAAVVQLLLDAGAPW 72
Query: 64 TAALPESLAS 35
A P +++
Sbjct: 73 NALSPTGISA 82
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 27.1 bits (57), Expect = 8.9
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYL 220
P+F P G++PVL +S AI RY+
Sbjct: 43 PEFLKMNPIGKIPVLETPDGPVFESNAIARYV 74
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 27.1 bits (57), Expect = 8.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 125 PDFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRK 229
P+ + PFGQ+P L +S AI +Y+ RK
Sbjct: 43 PEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK 77
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,543,833
Number of Sequences: 37544
Number of extensions: 204759
Number of successful extensions: 781
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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