Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31560
(516 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22) 62 2e-10
SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24) 58 6e-09
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 54 9e-08
SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18) 52 3e-07
SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.026
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 30 0.98
SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023) 30 0.98
SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05) 30 1.3
SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7) 29 1.7
SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42) 27 6.9
SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018) 27 9.2
SB_11293| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.2
>SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22)
Length = 79
Score = 62.5 bits (145), Expect = 2e-10
Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
Frame = +2
Query: 8 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPK--TPFGQMPVLVIDG 181
MP +YF + E R++ A G +FED+R+ +WP K + PFGQ+P+LVID
Sbjct: 1 MPSYKLYYFNARGRAEPARLVFAAAGIEFEDNRMAMGEWPKVKKELHAPFGQVPLLVIDD 60
Query: 182 K-QYAQSTAICRYLGRK 229
K + AQS AI ++ R+
Sbjct: 61 KIKLAQSLAIMTFIARE 77
>SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24)
Length = 102
Score = 57.6 bits (133), Expect = 6e-09
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Frame = +2
Query: 5 KMPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLS-ADWPDFKPK--TPFGQMPVLVI 175
KMP HYF + E R+ A G ++ED R +W KP+ PFGQ+P+LVI
Sbjct: 22 KMPSYKLHYFNARGRAEPARLAFAAAGIEYEDKRFEGREEWLRVKPELDPPFGQVPLLVI 81
Query: 176 DGK-QYAQSTAICRYLGRK 229
D K + AQS AI Y+ R+
Sbjct: 82 DDKIKLAQSMAILAYVARE 100
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 53.6 bits (123), Expect = 9e-08
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 MPKVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKP--KTPFGQMPVLVIDG 181
MP YF + E R+ A GG +ED R+ +W K KT G +PVL +DG
Sbjct: 1 MPNYKLIYFNTRGRAEPTRLCFAAGGIPYEDVRLTGEEWTKMKAENKTIMGYLPVLEVDG 60
Query: 182 KQYAQSTAICRYLGRKYGL 238
QY +S AI R + GL
Sbjct: 61 IQYCESMAIFRLAAKLAGL 79
>SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18)
Length = 195
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Frame = +2
Query: 29 YFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKP--KTPFGQMPVLVI-DGKQYAQS 199
YF +A E R+LL F D RV DW K + PFG++P+L I DG++ AQS
Sbjct: 9 YFDARARAECIRVLLHLADVPFTDERVAPPDWAAMKTSGRCPFGELPLLEISDGRKLAQS 68
Query: 200 TAICRYLGRKY 232
AI R+L +++
Sbjct: 69 HAIFRFLAKEH 79
>SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 35.5 bits (78), Expect = 0.026
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 155 QMPVLVIDGKQY---AQSTAICRYLGRKYGLAGANDEEAFEID 274
Q+P + K++ QS AI RY+GRKY + G +EE +D
Sbjct: 3 QLPYYIDGDKKHIKITQSNAILRYIGRKYDMCGKTEEEKVIVD 45
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 30.3 bits (65), Expect = 0.98
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 421 FNYRVQLLQHIRVYVLRKVLVFFCF*LLISFVVYSGRFGANIVQELHVLVDLEGLLVIGP 242
F + VQ+ + V VL +FC L FV+ RF +Q+ + + L+ VI P
Sbjct: 822 FRFPVQV-RVTSVQVLCTDFCYFCSGSLYRFVLLLFRFSVQKLQDAYTQLALQAAKVISP 880
Query: 241 GE 236
GE
Sbjct: 881 GE 882
>SB_8005| Best HMM Match : Glutaredoxin (HMM E-Value=0.00023)
Length = 271
Score = 30.3 bits (65), Expect = 0.98
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 11 PKV-VYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPKTPFGQMPVLVIDGKQ 187
PK+ +Y Y C + R L Y G D+ V + + T + ++P+ ++DGKQ
Sbjct: 94 PKITLYQYQTCPFCCKV-RAYLEYFGIDYTKVEVNPLTRKEIEFSTEYRKVPIAIVDGKQ 152
Query: 188 YAQSTA 205
ST+
Sbjct: 153 PGGSTS 158
>SB_5046| Best HMM Match : GST_N (HMM E-Value=2.5e-05)
Length = 280
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 38 CKALGESGRMLLAYGGQDFEDHR 106
C+ LG+ R+LL Y +DFED R
Sbjct: 194 CQKLGQPIRLLLKYTNEDFEDKR 216
>SB_34976| Best HMM Match : N_methyl (HMM E-Value=1.7)
Length = 177
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 15 RLCTITSLARLSGRAAVCCSPTEAR-TSKTTACSPLTGLTSSQRLRSVR 158
R+C +GR C SPT A T++T A S LT +S+ ++R
Sbjct: 67 RICEYKKDCSQAGRVPRCISPTTATLTTETIAASQLTPSSSATTTTTIR 115
>SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 14 KVVYHYFACKALGESGRMLLAYGGQDFEDHRVLSADWPDFKPK 142
+V HYF + E R+++ G + + DWP K K
Sbjct: 53 QVTLHYFGSRGKAEGIRLMMEDNGVLYAETNYTKEDWPTVKQK 95
>SB_36082| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 28.7 bits (61), Expect = 3.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = +2
Query: 290 LHDIRAKAAAVYYEA--DEELKAKKHEDFSKNVYP 388
LHD+R +AAAV A EE E+F+K+ +P
Sbjct: 15 LHDVRDRAAAVLERAKTGEERADDSEEEFAKSFHP 49
>SB_50300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3669
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 15 RLCTITSLARLSGRAAVCCSP-TEARTSKTTACSPLTGLTSS 137
R+C +GR C SP TE T++T A S LT +S+
Sbjct: 110 RICEYKKDCSQAGRVPRCISPTTETLTTETIAASQLTPSSSA 151
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +3
Query: 15 RLCTITSLARLSGRAAVCCSP-TEARTSKTTACSPLTGLTSS 137
R+C +GR C SP TE T++T A S LT +S+
Sbjct: 311 RICEYKKDCSQAGRVPRCISPTTETLTTETIAASQLTPSSSA 352
>SB_48087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1396
Score = 27.9 bits (59), Expect = 5.3
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +3
Query: 30 TSLARLSGRAAVCCSPTEARTSKTTACSPLTGLTSSQRLRSVR 158
+SL + RA CSP +AC PL G+ SQ L V+
Sbjct: 981 SSLTSFTDRA---CSPMAVEEESQSACVPLVGVPLSQALVKVQ 1020
>SB_39986| Best HMM Match : CNH (HMM E-Value=6.99949e-42)
Length = 952
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 4/91 (4%)
Frame = +2
Query: 164 VLVIDGKQYAQSTAICRYLGRKYGLAGANDEEAF----EIDQNVEFLHDIRAKAAAVYYE 331
+L D + + + I + L RK N E A ++ ++ L D +K A +
Sbjct: 40 LLAFDDLELKEKSEIVQELNRKLSEMSKNYENATMEGKRLECRIDELMDECSKVTAAKEK 99
Query: 332 ADEELKAKKHEDFSKNVYPDMLKKLNSIVEA 424
+ ELK +K +++ MLK +++E+
Sbjct: 100 LEGELKERKRAQEGQDLTVSMLKSTCTMLES 130
>SB_53542| Best HMM Match : GST_C (HMM E-Value=0.018)
Length = 261
Score = 27.1 bits (57), Expect = 9.2
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 5/105 (4%)
Frame = +2
Query: 158 MPVLVIDGKQYAQSTAICRYLGRKYGLAGANDEEAFEIDQNVEFLHDIRAKAAAVYYEAD 337
MP + D K S YL +YGL E+D+++ + +A A + D
Sbjct: 62 MPAIEYDDKVVVHSARCIPYLNERYGL---------ELDRDLS--EEQKATATTITAMLD 110
Query: 338 EELKAKKH-----EDFSKNVYPDMLKKLNSIVEANKRSHCCRKAD 457
E+ H D++K +++ LNSI K + C K+D
Sbjct: 111 EKTSWTLHYHRWCSDYAKQYKDELMYGLNSIF--RKIAFCVFKSD 153
>SB_11293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 128 DFKPKTPFGQMPVLVIDGKQYAQSTAICRYLGRKY 232
D +PK F ++ + V DG ++ S A CR G Y
Sbjct: 121 DARPKDVFTRIVLQVEDGPKWNDSIAECRKRGNAY 155
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,387,919
Number of Sequences: 59808
Number of extensions: 230227
Number of successful extensions: 753
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 16,821,457
effective HSP length: 77
effective length of database: 12,216,241
effective search space used: 1148326654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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