Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31554
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g36640.1 68415.m04494 late embryogenesis abundant protein (EC... 45 3e-05
At2g36070.1 68415.m04429 mitochondrial import inner membrane tra... 36 0.016
At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxida... 35 0.037
At5g44310.2 68418.m05424 late embryogenesis abundant domain-cont... 34 0.049
At5g44310.1 68418.m05423 late embryogenesis abundant domain-cont... 34 0.049
At3g15670.1 68416.m01986 late embryogenesis abundant protein, pu... 34 0.049
At5g39420.1 68418.m04775 protein kinase family protein contains ... 34 0.065
At4g34430.4 68417.m04893 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.3 68417.m04892 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.2 68417.m04891 DNA-binding family protein contains Pfa... 34 0.065
At4g34430.1 68417.m04890 DNA-binding family protein contains Pfa... 34 0.065
At2g19950.1 68415.m02332 expressed protein contains 2 transmembr... 34 0.065
At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2 tr... 33 0.15
At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2 tr... 33 0.15
At5g20490.1 68418.m02435 myosin, putative similar to myosin (GI:... 32 0.20
At2g20510.1 68415.m02395 mitochondrial import inner membrane tra... 31 0.35
At5g46070.1 68418.m05665 guanylate-binding family protein contai... 31 0.61
At4g09940.1 68417.m01627 avirulence-responsive family protein / ... 31 0.61
At2g28620.1 68415.m03479 kinesin motor protein-related 31 0.61
At4g27595.1 68417.m03964 protein transport protein-related low s... 30 0.80
At4g21020.1 68417.m03041 late embryogenesis abundant domain-cont... 30 0.80
At3g09550.1 68416.m01134 ankyrin repeat family protein contains ... 30 0.80
At2g32240.1 68415.m03940 expressed protein contains Pfam profile... 30 0.80
At2g26570.1 68415.m03187 expressed protein contains Pfam profile... 30 0.80
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 0.80
At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)... 30 0.80
At5g20440.1 68418.m02430 mob1/phocein family protein contains Pf... 30 1.1
At2g48160.1 68415.m06031 PWWP domain-containing protein 30 1.1
At1g68790.1 68414.m07863 expressed protein 30 1.1
At4g32160.1 68417.m04574 phox (PX) domain-containing protein con... 29 1.4
At3g50370.1 68416.m05508 expressed protein 29 1.4
At3g22790.1 68416.m02873 kinase interacting family protein simil... 29 1.4
At3g09980.1 68416.m01198 expressed protein contains Pfam profile... 29 1.4
At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C... 29 1.9
At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C... 29 1.9
At2g27170.1 68415.m06029 structural maintenance of chromosomes (... 29 1.9
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 29 1.9
At3g53040.1 68416.m05846 late embryogenesis abundant protein, pu... 29 2.5
At3g58840.1 68416.m06558 expressed protein 28 3.2
At1g45545.1 68414.m05199 hypothetical protein contains Pfam prof... 28 3.2
At5g61920.1 68418.m07773 hypothetical protein 28 4.3
At5g60930.1 68418.m07643 chromosome-associated kinesin, putative... 28 4.3
At5g40450.1 68418.m04905 expressed protein 28 4.3
At5g07780.1 68418.m00890 formin homology 2 domain-containing pro... 28 4.3
At2g36410.2 68415.m04470 expressed protein contains Pfam profile... 28 4.3
At2g36410.1 68415.m04469 expressed protein contains Pfam profile... 28 4.3
At1g79830.1 68414.m09326 expressed protein weak similarity to TA... 28 4.3
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 28 4.3
At1g26650.1 68414.m03245 expressed protein 28 4.3
At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a '... 28 4.3
At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a '... 28 4.3
At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family pr... 28 4.3
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 27 5.7
At5g54670.1 68418.m06807 kinesin-like protein C (KATC) 27 5.7
At3g59080.1 68416.m06586 aspartyl protease family protein contai... 27 5.7
At3g50100.1 68416.m05477 exonuclease family protein contains exo... 27 5.7
At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp... 27 7.5
At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp... 27 7.5
At5g51370.1 68418.m06369 F-box family protein similar to unknown... 27 7.5
At5g33380.1 68418.m03963 hypothetical protein 27 7.5
At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF... 27 7.5
At3g56150.1 68416.m06241 eukaryotic translation initiation facto... 27 7.5
At3g05270.1 68416.m00575 expressed protein similar to endosome-a... 27 7.5
At2g35070.1 68415.m04302 expressed protein 27 7.5
At2g01680.1 68415.m00095 ankyrin repeat family protein contains ... 27 7.5
At1g77580.2 68414.m09032 myosin heavy chain-related low similari... 27 7.5
At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR ... 27 7.5
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 27 9.9
At1g77580.1 68414.m09033 myosin heavy chain-related low similari... 27 9.9
At1g33910.1 68414.m04203 avirulence-responsive family protein / ... 27 9.9
At1g06530.1 68414.m00692 myosin heavy chain-related similar to m... 27 9.9
>At2g36640.1 68415.m04494 late embryogenesis abundant protein
(ECP63) / LEA protein nearly identical to to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 448
Score = 44.8 bits (101), Expect = 3e-05
Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Frame = +2
Query: 128 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGS--ESVLQQLNAFAKSLQGALGD 301
K IE K KT E + ++ K+ + +D + + K G +S ++ L G +
Sbjct: 226 KAIEAKDKTAEKTGEYKDYTVEKATEGKDVTVS-KLGELKDSAVETAKRAMGFLSGKTEE 284
Query: 302 ANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVS 481
A GKA E + +++N+E+ E R+ ++ L+E+ A Q Q++++ + +
Sbjct: 285 AKGKAVETKDTAKENMEKAGEVTRQKMEEMRLEGKELKEEAGAKAQEASQKTRESTESGA 344
Query: 482 SNVQETNEKLA 514
+ET + A
Sbjct: 345 QKAEETKDSAA 355
>At2g36070.1 68415.m04429 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 469
Score = 35.9 bits (79), Expect = 0.016
Identities = 22/76 (28%), Positives = 43/76 (56%)
Frame = +2
Query: 269 FAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTV 448
F+K ++G D+N + ++ +++ ++ AEEL+ D++ EKL Q
Sbjct: 51 FSKKIRGE-ADSNPEFQKTVKEFKER----AEELQGVKEDLKVRTKQTTEKLYKQGQGVW 105
Query: 449 QESQKLAKKVSSNVQE 496
E++ +AKKVSS+V++
Sbjct: 106 TEAESVAKKVSSSVKD 121
>At1g62380.1 68414.m07038 1-aminocyclopropane-1-carboxylate oxidase,
putative / ACC oxidase, putative nearly identical to ACC
oxidase (ACC ox1) GI:587086 from [Brassica oleracea]
Length = 320
Score = 34.7 bits (76), Expect = 0.037
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +2
Query: 119 DFFKDIEHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGAL 295
D IE TK+ +KT EQ+FN + KSK + +D + +S +
Sbjct: 47 DLMDKIEKMTKDHYKTCQEQKFNDMLKSKGLDNLETEVEDVDWESTFYVRHLPQSNLNDI 106
Query: 296 GDANGKAKEALEQSRQNIERTAEEL 370
D + + + A++ + +E AE+L
Sbjct: 107 SDVSDEYRTAMKDFGKRLENLAEDL 131
>At5g44310.2 68418.m05424 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 331
Score = 34.3 bits (75), Expect = 0.049
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +2
Query: 161 KTLEQQFNSLTKSKD-AQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEAL--- 328
+ ++ + + K+KD A D + KD +E ++N A + KAK+
Sbjct: 121 RAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKAYETKEKAKDKAYDV 180
Query: 329 -EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 505
E+++ E T E++ + A ++EK + + T + + A + + +ET +
Sbjct: 181 KEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAADKAEETKD 240
Query: 506 K 508
K
Sbjct: 241 K 241
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/118 (23%), Positives = 48/118 (40%)
Frame = +2
Query: 158 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 337
HKT E+ K K A D + KD +E ++N A + KAK+
Sbjct: 87 HKTKEE-----AKDK-AYDMKERTKDYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDV 140
Query: 338 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
++ + AEE A V + A+ +K + ++ + +K +ET EK+
Sbjct: 141 KEKTKDYAEE---AKDKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDFAEETKEKV 195
>At5g44310.1 68418.m05423 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to 51 kDa seed maturation protein
[Glycine max] GI:414977; contains Pfam profile PF02987:
Late embryogenesis abundant protein
Length = 295
Score = 34.3 bits (75), Expect = 0.049
Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Frame = +2
Query: 161 KTLEQQFNSLTKSKD-AQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEAL--- 328
+ ++ + + K+KD A D + KD +E ++N A + KAK+
Sbjct: 85 RAADKAYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKAYETKEKAKDKAYDV 144
Query: 329 -EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 505
E+++ E T E++ + A ++EK + + T + + A + + +ET +
Sbjct: 145 KEKTKDFAEETKEKVNEGASRAADKAYDVKEKTKNYAEQTKDKVNEGASRAADKAEETKD 204
Query: 506 K 508
K
Sbjct: 205 K 205
Score = 30.7 bits (66), Expect = 0.61
Identities = 28/118 (23%), Positives = 48/118 (40%)
Frame = +2
Query: 158 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 337
HKT E+ K K A D + KD +E ++N A + KAK+
Sbjct: 51 HKTKEE-----AKDK-AYDMKERTKDYAEQTKNKVNEGASRAADKAYETKEKAKDKAYDV 104
Query: 338 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
++ + AEE A V + A+ +K + ++ + +K +ET EK+
Sbjct: 105 KEKTKDYAEE---AKDKVNEGASRAADKAYETKEKAKDKAYDVKEKTKDFAEETKEKV 159
>At3g15670.1 68416.m01986 late embryogenesis abundant protein,
putative / LEA protein, putative similar to SP|P13934
Late embryogenesis abundant protein 76 (LEA 76)
{Brassica napus}; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 225
Score = 34.3 bits (75), Expect = 0.049
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 QGALGDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQ 460
Q G A G ++ E+ R +TA+ + KAH + + QAA Q + +Q
Sbjct: 18 QEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQKAHETAQ 77
Query: 461 KLAKKVSSNVQETNEK 508
+K S Q +K
Sbjct: 78 SAKEKTSQTAQTAQQK 93
Score = 31.5 bits (68), Expect = 0.35
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 296 GDANGKAKEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVQNTVQESQKLAK 472
G+ GKA+E Q+ + AEE R K + E Q+A T Q +Q +
Sbjct: 11 GETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDKTSQTAQAAQQ 70
Query: 473 KVSSNVQETNEK 508
K Q EK
Sbjct: 71 KAHETAQSAKEK 82
>At5g39420.1 68418.m04775 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 644
Score = 33.9 bits (74), Expect = 0.065
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +2
Query: 119 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALG 298
D +++ H + + + ++ SL S DFS+ +D + L+ L +S+ G L
Sbjct: 555 DVIEEVPSHESKLSR-IGERHGSLDGS--GLDFSQREEDSPKKTLEHLQFGKQSISGPLI 611
Query: 299 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKN 400
+GK E L+++ NI + +RK+H E++
Sbjct: 612 FKSGKIDEILQRNESNIR---QAVRKSHLQREQD 642
>At4g34430.4 68417.m04893 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 986
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 448
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 449 QESQKLAKKVSSN-VQETNEK 508
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.3 68417.m04892 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 983
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 448
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 704 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 763
Query: 449 QESQKLAKKVSSN-VQETNEK 508
E +LAK+ +N V T +K
Sbjct: 764 GEKVQLAKEEGANDVLSTPDK 784
>At4g34430.2 68417.m04891 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 448
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 449 QESQKLAKKVSSN-VQETNEK 508
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At4g34430.1 68417.m04890 DNA-binding family protein contains Pfam
domains PF04433: SWIRM domain, PF00249: Myb-like
DNA-binding domain and PF00569: Zinc finger, ZZ type
Length = 985
Score = 33.9 bits (74), Expect = 0.065
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 3/81 (3%)
Frame = +2
Query: 275 KSLQGALGDANGKAKEALEQSRQNIERTAEELRK--AHPDVEKNATALREKLQAAVQNTV 448
K LQ L D N + E + S+ + ++A + + A DVE T EK V TV
Sbjct: 706 KELQEPLKDGNKLSSENKDASQSTVSQSAADASQPEASRDVEMKDTLQSEKDPEDVVKTV 765
Query: 449 QESQKLAKKVSSN-VQETNEK 508
E +LAK+ +N V T +K
Sbjct: 766 GEKVQLAKEEGANDVLSTPDK 786
>At2g19950.1 68415.m02332 expressed protein contains 2 transmembrane
domains; weak similarity to HPSR2 - heavy chain
potential motor protein (GI:871048) [Giardia
intestinalis]
Length = 702
Score = 33.9 bits (74), Expect = 0.065
Identities = 30/133 (22%), Positives = 58/133 (43%), Gaps = 4/133 (3%)
Frame = +2
Query: 128 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGS-ESVLQQLNAFAKSLQGALGDA 304
K E + K L + +TK + + + A K+ E+++ ++A Q AL +
Sbjct: 318 KSYEASIRHLQKDLSAAKSEVTKVESSMVEALAAKNSEIETLVSAMDALKN--QAALNEG 375
Query: 305 NGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ---AAVQNTVQESQKLAKK 475
+ +AL + ER AEE R AH + A +L+ + Q++A +
Sbjct: 376 KLSSLQALREELATTERRAEEERSAHNATKMAAMERERELEHRAVDASTALVRIQRIADE 435
Query: 476 VSSNVQETNEKLA 514
++ V + +K+A
Sbjct: 436 RTAKVADFEQKVA 448
>At2g24420.2 68415.m02918 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +2
Query: 203 DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 382
D D K DG + L QLNA ++L+ + D K + E+ E+ +E +
Sbjct: 30 DGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKV 88
Query: 383 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 493
+E ++LR+K + + ++Q A ++ V+
Sbjct: 89 ASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVE 125
>At2g24420.1 68415.m02917 DNA repair ATPase-related contains 2
transmembrane domains; similar to DNA double-strand
break repair rad50 ATPase. (Swiss-Prot:O33600)
[Sulfolobus acidocaldarius]
Length = 440
Score = 32.7 bits (71), Expect = 0.15
Identities = 23/97 (23%), Positives = 44/97 (45%)
Frame = +2
Query: 203 DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAH 382
D D K DG + L QLNA ++L+ + D K + E+ E+ +E +
Sbjct: 30 DGGDEPKLRSDGGDIELDQLNAKIRALESQIDDKT-KELKGREELVTEKEKLLQERQDKV 88
Query: 383 PDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 493
+E ++LR+K + + ++Q A ++ V+
Sbjct: 89 ASLETEVSSLRKKGSSDSVELLSKAQARATELEKQVE 125
>At5g20490.1 68418.m02435 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin-like protein
my5, common sunflower, PIR:T14279
Length = 1545
Score = 32.3 bits (70), Expect = 0.20
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Frame = +2
Query: 320 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ--ES-QKLAKKVSSNV 490
EAL+ S Q + AE LRKA + E + L +L+ A + Q ES Q+L +K+S++
Sbjct: 997 EALKASLQAERQAAENLRKAFSEAEARNSELATELENATRKADQLHESVQRLEEKLSNSE 1056
Query: 491 QE 496
E
Sbjct: 1057 SE 1058
>At2g20510.1 68415.m02395 mitochondrial import inner membrane
translocase subunit TIM44, putative contains similarity
to Swiss-Prot:O35857 import inner membrane translocase
subunit TIM44, mitochondrial precursor [Mus musculus];
contains Pfam domian PF04280: Mitochondrial import inner
membrane, translocase subunit TIM44
Length = 472
Score = 31.5 bits (68), Expect = 0.35
Identities = 18/81 (22%), Positives = 39/81 (48%)
Frame = +2
Query: 254 QQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 433
++ + F + + G+A+ + E++ + ++ EE + D++ EKL
Sbjct: 43 RRFSVFTEFSKNIRGEAHSNPE--FERTVKELKERTEEFKGVTEDLKVRTKQTTEKLYKQ 100
Query: 434 VQNTVQESQKLAKKVSSNVQE 496
E++ AKKVSS+V++
Sbjct: 101 ADGVWTEAESAAKKVSSSVKD 121
>At5g46070.1 68418.m05665 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 1060
Score = 30.7 bits (66), Expect = 0.61
Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 4/105 (3%)
Frame = +2
Query: 170 EQQFNSLTKSK-DAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 346
E+Q +L + K D +D + + ++ ++ + KE Q N
Sbjct: 815 ERQVENLERQKTDLEDELDRLRVSEMEAVSKVTILEARVEEREKEIGSLIKETNAQRAHN 874
Query: 347 I---ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 472
+ E+ +E RKAH + A AL +LQAA + Q+LA+
Sbjct: 875 VKSLEKLLDEERKAHIAANRRAEALSLELQAAQAHVDNLQQELAQ 919
>At4g09940.1 68417.m01627 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 (Arabidopsis thaliana); contains
Pfam PF04548: AIG1 family;
Length = 394
Score = 30.7 bits (66), Expect = 0.61
Identities = 32/146 (21%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Frame = +2
Query: 98 MVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDA---QDFSKAWKDGSESVL-QQLN 265
+ R + + D+ H +E + + + + K Q+ + KD +S QQL
Sbjct: 234 IARLNGKSYMADLSHEIRENETAFQIKQQEILEMKGLYTRQEMLQMKKDMEKSFENQQLR 293
Query: 266 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKL---QAAV 436
+ ++ L + KE LEQ + + EL K +VEK ++ + ++L QA
Sbjct: 294 QMMERVETELRET----KERLEQQLKEEKSARLELEKRAKEVEKRSSDVVKELNDEQAKR 349
Query: 437 QNTVQESQKLAKKVSSNVQETNEKLA 514
+ +++ K+ + V+ N++LA
Sbjct: 350 LESESRAKEAVKQSNGVVENLNKELA 375
>At2g28620.1 68415.m03479 kinesin motor protein-related
Length = 1076
Score = 30.7 bits (66), Expect = 0.61
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Frame = +2
Query: 119 DFFKDIEHHTKEFHKTLEQQFNSLTK-SKDAQD-----FSKAWKDGSESVLQQLNAFAKS 280
D K + +F KTL+ N LTK ++DAQ+ S K ES+ + +
Sbjct: 713 DSAKSVSTVMLDFFKTLDTHANKLTKLAEDAQNVNEQKLSAFTKKFEESIANEEKQMLEK 772
Query: 281 LQGALGDANGKAKEALEQSRQNIER 355
+ L +N + KE ++ + Q+I +
Sbjct: 773 VAELLASSNARKKELVQIAVQDIRQ 797
>At4g27595.1 68417.m03964 protein transport protein-related low
similarity to SP|P25386 Intracellular protein transport
protein USO1 {Saccharomyces cerevisiae}
Length = 1212
Score = 30.3 bits (65), Expect = 0.80
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 299 DANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 469
D K KE+L E QNI + AEELR D K E+L AA ++ V++ KL
Sbjct: 647 DQLSKVKESLVDKETKLQNIIQEAEELRVKEIDYLKKI----EELSAAKESLVEKETKLL 702
Query: 470 KKVSSNVQETNE 505
S VQE E
Sbjct: 703 ----STVQEAEE 710
>At4g21020.1 68417.m03041 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to SP|P23283 Desiccation-related
protein {Craterostigma plantagineum}; contains Pfam
profile PF02987: Late embryogenesis abundant protein
Length = 266
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/132 (19%), Positives = 57/132 (43%)
Frame = +2
Query: 110 DAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQG 289
+A D D + +K++ + + + K K + SKA E+ Q + ++ +
Sbjct: 54 NARDSRADSAYGSKKWREDTGEYYAQAAKDKANEGASKAADKAYETKEQAKDKAYETKE- 112
Query: 290 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLA 469
A A A E+++ ERT +++ + A +EK + ++T+ +++ A
Sbjct: 113 ---KAKDTAYNAKEKAKDYAERTKDKVNEGAYKAADKAEDTKEKAKDYAEDTMDNAKEKA 169
Query: 470 KKVSSNVQETNE 505
+ V+E E
Sbjct: 170 RHAKEKVKEYGE 181
>At3g09550.1 68416.m01134 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 436
Score = 30.3 bits (65), Expect = 0.80
Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 158 HKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQS 337
HKT LT S++ + + +LN L+ + + LEQ+
Sbjct: 177 HKTAYDIAEGLTHSEETAEIKEILSRCGALKANELNQPRDELRKTVTEIKKDVHTQLEQT 236
Query: 338 RQ---NIERTAEELRKAHPDVEKNAT 406
R+ N++ A+ELRK H NAT
Sbjct: 237 RKTNKNVDGIAKELRKLHRAGINNAT 262
>At2g32240.1 68415.m03940 expressed protein contains Pfam profile:
PF04508 viral A-type inclusion protein repeat
Length = 775
Score = 30.3 bits (65), Expect = 0.80
Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Frame = +2
Query: 173 QQFNSLTKSKDAQDFSKAWKDGSESVL-----QQLNAFAKSLQGALGDANGKAKEALEQS 337
+ N K + Q K+ + SES L QL + L+G +G + + + AL++
Sbjct: 310 ESVNEKLKQEFDQAQEKSLQSSSESELLAETNNQLKIKIQELEGLIGSGSVEKETALKRL 369
Query: 338 RQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNE 505
+ IER ++ E ++ L EKL+ +N ++E +KLA + +S V +T +
Sbjct: 370 EEAIERFNQK--------ETESSDLVEKLKTH-ENQIEEYKKLAHE-ASGVADTRK 415
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/64 (23%), Positives = 29/64 (45%)
Frame = +2
Query: 323 ALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETN 502
ALE ++ E + D+ K T+ EKLQ+ + + +E+ ++ S +E
Sbjct: 476 ALEAEKEQTANELEASKTTIEDLTKQLTSEGEKLQSQISSHTEENNQVNAMFQSTKEELQ 535
Query: 503 EKLA 514
+A
Sbjct: 536 SVIA 539
>At2g26570.1 68415.m03187 expressed protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827);
weak similarity to merozoite surface protein 3 alpha
(GI:27596802) [Plasmodium vivax]
Length = 807
Score = 30.3 bits (65), Expect = 0.80
Identities = 26/107 (24%), Positives = 45/107 (42%)
Frame = +2
Query: 152 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALE 331
E +T + + +K KDA++ + ++ + AKSL + KAKE E
Sbjct: 524 EIDRTRSEIASVQSKEKDAREKMVELPKQLQQAAEEADE-AKSLAEVAREELRKAKEEAE 582
Query: 332 QSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAK 472
Q++ L A ++E A E+L A ++ES+ K
Sbjct: 583 QAKAGASTMESRLFAAQKEIE--AAKASERLALAAIKALEESESTLK 627
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 30.3 bits (65), Expect = 0.80
Identities = 20/88 (22%), Positives = 38/88 (43%)
Frame = +2
Query: 233 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 412
D ESV + + +S+ DA K +E ++ + + KAH E+ +
Sbjct: 214 DAKESVADKAHDAKESVAQKAHDAKEKVREKAHDVKETVAQ------KAHESKERAKDRV 267
Query: 413 REKLQAAVQNTVQESQKLAKKVSSNVQE 496
REK Q + +S+ ++V + +E
Sbjct: 268 REKAQELKETATHKSKNAWERVKNGARE 295
>At1g09080.1 68414.m01013 luminal binding protein 3 (BiP-3) (BP3)
Similar to Arabidopsis luminal binding protein
(gb|D89342); contains Pfam domain PF00012: dnaK protein
Length = 678
Score = 30.3 bits (65), Expect = 0.80
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +2
Query: 329 EQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQN---TVQESQKLAKKVSSNVQET 499
E+ + + R AEE + +++ A R KL+ V N TV + +KLAKK+S +E
Sbjct: 557 EEEIEEMIREAEEFAEEDKIMKEKIDA-RNKLETYVYNMKSTVADKEKLAKKISDEDKEK 615
Query: 500 NE 505
E
Sbjct: 616 ME 617
>At5g20440.1 68418.m02430 mob1/phocein family protein contains Pfam
profile: PF03637 mob1/phocein family
Length = 217
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +2
Query: 335 SRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSN 487
S N+ RT ++ HP+ + + +RE + + ++E+ +L + V N
Sbjct: 9 SSNNVVRTVPSKKRKHPEYKSKGSQIRELISGIRSDNLREAVRLPQGVDIN 59
>At2g48160.1 68415.m06031 PWWP domain-containing protein
Length = 1366
Score = 29.9 bits (64), Expect = 1.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +1
Query: 1 PVRISSALSLSTVHH-GRQVR--SSLRLHRSGPRSDGATRRSRLLQGHRTPHQGVP 159
P+R++ LS ST+H+ G + S ++L S P++DG+ + R H PH P
Sbjct: 1184 PLRMNPPLSGSTMHYQGPESSYISGVQLTNSIPQADGSNFQHRPYPSHPHPHPPPP 1239
>At1g68790.1 68414.m07863 expressed protein
Length = 1085
Score = 29.9 bits (64), Expect = 1.1
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 5/130 (3%)
Frame = +2
Query: 137 EHHTKEFHKTL-EQQFNSLTKSKDAQDFSKAWKDGSESVLQ-QLNAFAKSLQGALGDANG 310
E EF + L E++ + K D Q KA D + +L +SL L G
Sbjct: 331 EKELHEFEENLIEREQMEIGKLLDDQ---KAVLDSRRREFEMELEQMRRSLDEEL---EG 384
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK---LQAAVQNTVQESQKLAKKVS 481
K E +EQ + I E+L K +EK +++K L A ++ TV+E +K K
Sbjct: 385 KKAE-IEQLQVEISHKEEKLAKREAALEKKEEGVKKKEKDLDARLK-TVKEKEKALKAEE 442
Query: 482 SNVQETNEKL 511
+ NE+L
Sbjct: 443 KKLHMENERL 452
>At4g32160.1 68417.m04574 phox (PX) domain-containing protein
contains Pfam profile PF00787: PX domain
Length = 723
Score = 29.5 bits (63), Expect = 1.4
Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 10/97 (10%)
Frame = +2
Query: 245 SVLQQLNAFAKSLQGALGDANGKAKEALEQS------RQN-IERTAEELRKAHPDVEKNA 403
+V LN L+G L ++KE LEQ+ R N ++ EELR+ ++E
Sbjct: 423 AVKDYLNKKVNDLEGELETTKQRSKENLEQAIMSERERFNQMQWDMEELRQKSYEMEMKL 482
Query: 404 TALRE---KLQAAVQNTVQESQKLAKKVSSNVQETNE 505
+ + + VQ+T+ E L+K++ + Q+ +
Sbjct: 483 KSREDGSSHAEPTVQSTISEKHVLSKELDARKQQLED 519
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 29.5 bits (63), Expect = 1.4
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Frame = +2
Query: 329 EQSRQNIERTAEELRKAHPDVEKNATALRE--KLQAAVQNTVQESQKLAKK 475
EQ R R AEELRK+ + EK+ + E + QAA Q ++ +K++++
Sbjct: 531 EQERLEATRRAEELRKSKEE-EKHRLFMEEERRKQAAKQKLLELEEKISRR 580
>At3g22790.1 68416.m02873 kinase interacting family protein similar to
kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 1694
Score = 29.5 bits (63), Expect = 1.4
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 4/117 (3%)
Frame = +2
Query: 173 QQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQ----SR 340
Q NS K K + + K G E Q+LN+ + LQ +L +AN + + LE
Sbjct: 1103 QNINSGLKQK-VETLEEILK-GKEVDSQELNSKLEKLQESLEEAN-ELNDLLEHQILVKE 1159
Query: 341 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
+ + + A EL +A ++ A E +A + +++ K ++K+ N+++ N +L
Sbjct: 1160 ETLRQKAIELLEAEEMLKATHNANAELCEAVEE--LRKDCKESRKLKGNLEKRNSEL 1214
>At3g09980.1 68416.m01198 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 178
Score = 29.5 bits (63), Expect = 1.4
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +2
Query: 281 LQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQ 460
L G++ ++ +KE E SR + R ++EK +RE++QA + +E++
Sbjct: 28 LSGSMSFSSQMSKEDEEMSRTALSA----FRAKEEEIEKKKMEIRERVQAQLGRVEEETK 83
Query: 461 KLA 469
+LA
Sbjct: 84 RLA 86
>At3g55050.2 68416.m06114 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 490
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 491 QETNEKL 511
+ E L
Sbjct: 246 EFNQEPL 252
>At3g55050.1 68416.m06113 serine/threonine protein phosphatase 2C
(PP2C6) identical to Ser/Thr protein phosphatase 2C
(PP2C6) (GI:15020818) [Arabidopsis thaliana]; similar to
protein phosphatase 2C (GI:3608412) [Mesembryanthemum
crystallinum]; contains Pfam PF00481 : Protein
phosphatase 2C domain; contains TIGRFAM TIGR01573 :
CRISPR-associated protein Cas2
Length = 384
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNV 490
KA + + +IE EELR HPD + N L+ K+ V+ +Q S+ +
Sbjct: 188 KAVQLSTEHNASIESVREELRLLHPD-DPNIVVLKHKVW-RVKGIIQVSRSIGDAYLKRA 245
Query: 491 QETNEKL 511
+ E L
Sbjct: 246 EFNQEPL 252
>At2g27170.1 68415.m06029 structural maintenance of chromosomes
(SMC) family protein similar to basement
membrane-associated chondroitin proteoglycan Bamacan
[Rattus norvegicus] GI:1785540; contains Pfam profile
PF02463: RecF/RecN/SMC N terminal domain. No suitalble
start codon was identified.
Length = 1207
Score = 29.1 bits (62), Expect = 1.9
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +2
Query: 254 QQLNAFAKSLQGALGDAN-GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQA 430
QQL+ KSL+ + D A+E LEQ + +EE K + VEK A + L
Sbjct: 214 QQLDKQRKSLEYTIYDKELHDAREKLEQVEVARTKASEESTKMYDRVEK-AQDDSKSLDE 272
Query: 431 AVQNTVQESQKLAK-KVSSNVQET 499
+++ +E Q L K K + Q+T
Sbjct: 273 SLKELTKELQTLYKEKETVEAQQT 296
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 29.1 bits (62), Expect = 1.9
Identities = 15/67 (22%), Positives = 37/67 (55%)
Frame = +2
Query: 314 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 493
AKE +E+ R +E + + + + N TAL++ +++A +N E++K + + + +
Sbjct: 970 AKEEIEKLRGEVESSKSHMLQYKSIAQVNETALKQ-MESAHENFRLEAEKRQRSLEAELV 1028
Query: 494 ETNEKLA 514
E+++
Sbjct: 1029 SLRERVS 1035
>At3g53040.1 68416.m05846 late embryogenesis abundant protein,
putative / LEA protein, putative similar to LEA protein
in group 3 [Arabidopsis thaliana] GI:1526424; contains
Pfam profile PF02987: Late embryogenesis abundant
protein
Length = 479
Score = 28.7 bits (61), Expect = 2.5
Identities = 17/96 (17%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +2
Query: 230 KDGSESVLQQLNAFA-KSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNAT 406
KD S + +L A + + A+G +GK +E +++ + + E++ +A + +
Sbjct: 285 KDAGVSKIGELKDSAVDTAKRAMGFLSGKTEETKQKAVETKDTAKEKMDEAGEEARRKME 344
Query: 407 ALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLA 514
+R + + ++ +++Q+ + + ET + +A
Sbjct: 345 EMRLEGKKLDEDASRKTQQSTESAADKAHETKDSVA 380
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALRE----KLQAAVQNTVQESQKLAKKV 478
KAKE +++R+ ++TAE++ + + AT ++ K+ + V +++ +
Sbjct: 251 KAKETADKAREAKDKTAEKVGEYRDYTAEKATETKDAGVSKIGELKDSAVDTAKRAMGFL 310
Query: 479 SSNVQETNEK 508
S +ET +K
Sbjct: 311 SGKTEETKQK 320
>At3g58840.1 68416.m06558 expressed protein
Length = 318
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +2
Query: 311 KAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSS 484
KA + + + E+ AE LRK +VEK L K+ V+E ++ +KK+ S
Sbjct: 128 KALAEIVEKLEGCEKEAEGLRKDRAEVEKRVRDLERKIGVL---EVREMEEKSKKLRS 182
>At1g45545.1 68414.m05199 hypothetical protein contains Pfam profile
PF05701: Plant protein of unknown function (DUF827)
Length = 752
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +2
Query: 272 AKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQ 451
AKSL A + KAKE ++++ + +L ++ ++E A+ EKL A +Q
Sbjct: 512 AKSLAIAAREELRKAKEESDEAKTGLSAVERQLMESKKEME--ASRASEKLALAAIKALQ 569
Query: 452 ESQ 460
E++
Sbjct: 570 ETE 572
>At5g61920.1 68418.m07773 hypothetical protein
Length = 238
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = +2
Query: 320 EALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ--AAVQNTVQESQKLAKKVSSNVQ 493
E+LE S Q +ER EE ++ + E+ + EKL ++ + + K +K+ S +
Sbjct: 170 ESLEASSQELERLKEEHQRLRKEFEEEKSGNVEKLAQLKGMERKIIGAVKAIEKLRSEIS 229
Query: 494 ETNEK 508
K
Sbjct: 230 TARNK 234
>At5g60930.1 68418.m07643 chromosome-associated kinesin, putative
microtubule-associated motor KIF4 , Mus musculus,
PIR:A54803
Length = 1294
Score = 27.9 bits (59), Expect = 4.3
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 7/112 (6%)
Frame = +2
Query: 164 TLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSR- 340
TLE Q + L K +DAQ K S+ +L ++ K K+ EQ R
Sbjct: 636 TLETQVSVLKKKQDAQAQLMRQKQKSDDAAIKLQDEIHRIKSQKVQLQQKIKQESEQFRA 695
Query: 341 ------QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 478
+ + + +E R+ ++ K AL +K + +Q +E+ ++ K++
Sbjct: 696 WKASREKEVMQLKKEGRRNEYEMHK-LMALNQKQKLVLQRKTEEASQVTKRL 746
>At5g40450.1 68418.m04905 expressed protein
Length = 2910
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/70 (22%), Positives = 35/70 (50%)
Frame = +2
Query: 299 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 478
D+NG E ++Q NI EE+ A P + ++ + + +++ + S++ +K V
Sbjct: 824 DSNGAEAEQIDQ---NITNETEEILVAKPVSLLDVKSVEQMQKPKLESPSEVSEETSKTV 880
Query: 479 SSNVQETNEK 508
++E E+
Sbjct: 881 DEKIEEKPEE 890
>At5g07780.1 68418.m00890 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02181
Length = 464
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -2
Query: 377 PCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 273
P PRPC+R + P + RALPG W
Sbjct: 61 PPPLPRPCSRPPKTKCSLKPLHWVKKTRALPGSLW 95
>At2g36410.2 68415.m04470 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 192
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 308 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 469
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At2g36410.1 68415.m04469 expressed protein contains Pfam profile
PF04949: Family of unknown function (DUF662)
Length = 195
Score = 27.9 bits (59), Expect = 4.3
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 308 GKAKEALEQSRQNIERTAEEL---RKAHPDVEKNATALREKLQAAVQNTVQESQKLA 469
G + SR++ E T L R ++EK +RE++QA + QE+++L+
Sbjct: 45 GSLSFSSHMSREDEEMTRSALSAFRAKEDEIEKRRMEVRERIQAQLGRVEQETKRLS 101
>At1g79830.1 68414.m09326 expressed protein weak similarity to TATA
element modulatory factor (TMF) (Swiss-Prot:P82094)
[Homo sapiens]
Length = 927
Score = 27.9 bits (59), Expect = 4.3
Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Frame = +2
Query: 260 LNAFAKSLQGALGDANGKAKEALEQ---SRQNIERTAEELRKAHPDVEK----NATALRE 418
L A L+ + + K K+ L++ + I++ E + + D+E+ N++A+ E
Sbjct: 725 LEGRANQLEVEIRELRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSE 784
Query: 419 KLQAAVQNTVQESQKLAKKVS 481
+L A QN+ E+ K ++K S
Sbjct: 785 QLPIARQNSAFENDKFSEKRS 805
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Frame = +2
Query: 167 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 346
L+ + + K++D+ + + + +E+ +LN SLQ + DA G +E + S Q+
Sbjct: 2227 LKSEVPNEKKNRDSDERHDSHGNSTETEADELNQNNSSLQ-QVTDAAGNGQEQAQVSSQS 2285
Query: 347 IERTAEELRKAHPD---VEKNATALREKLQ 427
+A P +E + T L E +Q
Sbjct: 2286 AGERGSSQTQAMPQDMRIEGDETILPEPIQ 2315
>At1g26650.1 68414.m03245 expressed protein
Length = 335
Score = 27.9 bits (59), Expect = 4.3
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = -3
Query: 298 SERSLETLGEGVELLQHGLGAVLPSLAEVLC 206
S +LE L E V +L++ LGA++ + A ++C
Sbjct: 24 SSNALEILRETVRILRYNLGALMLTTAVLIC 54
>At1g08060.2 68414.m00881 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g08060.1 68414.m00880 MOM1 identical to MOM1 (mutation in a
'Morpheus molecule') [Arabidopsis thaliana]
gi|8132770|gb|AAF73381.1|
Length = 2001
Score = 27.9 bits (59), Expect = 4.3
Identities = 13/54 (24%), Positives = 27/54 (50%)
Frame = +2
Query: 350 ERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
E+ A D+EK + +++K + VQ VQE ++ ++ + + +KL
Sbjct: 1111 EKRCSHYSTATRDIEKTISGIKKKYKKQVQKLVQEHEEKKMELLNMYADKKQKL 1164
>At1g01950.1 68414.m00113 armadillo/beta-catenin repeat family
protein / kinesin motor family protein similar to
kinesin-like protein GB:CAB41097 GI:5541717 from
[Arabidopsis thaliana]; contains Pfam profiles PF00225:
Kinesin motor domain, PF00514:
Armadillo/beta-catenin-like repeat
Length = 894
Score = 27.9 bits (59), Expect = 4.3
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 266 AFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNT 445
+ +K L+ L + + L+ ++ER + + +VEKN EK + Q
Sbjct: 416 SLSKKLEVQLDKVIAENERQLKAFDDDVERINRQAQNRISEVEKNFAEALEKEKLKCQME 475
Query: 446 VQES-QKLAKKVSSN 487
ES +KL +K+ SN
Sbjct: 476 YMESVKKLEEKLISN 490
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +2
Query: 299 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 478
D + K KE E+ R+ +ER E R+ +E+ REK++ + ++ KL K+
Sbjct: 137 DRHEKQKER-EREREKLEREKEREREK---IEREKEREREKMEREIFEREKDRLKLEKER 192
Query: 479 SSNVQETNEKL 511
+ EK+
Sbjct: 193 EIEREREREKI 203
>At5g54670.1 68418.m06807 kinesin-like protein C (KATC)
Length = 754
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/90 (33%), Positives = 47/90 (52%)
Frame = +2
Query: 242 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 421
ESV QL A ++ + A D+ GK KEA + EEL KA D++ TA ++
Sbjct: 136 ESVQVQL-AREQTEKLAANDSLGKEKEARLSVEKAQAGLTEELGKAQGDLQ---TA-NQR 190
Query: 422 LQAAVQNTVQESQKLAKKVSSNVQETNEKL 511
+Q +V + KL ++ +S++Q N KL
Sbjct: 191 IQ-----SVNDMYKLLQEYNSSLQLYNSKL 215
>At3g59080.1 68416.m06586 aspartyl protease family protein contains
similarity to CND41, chloroplast nucleoid DNA binding
protein (GI:2541876) [Nicotiana tabacum]; contains Pfam
profile PF00026: Eukaryotic aspartyl protease
Length = 535
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 350 RCSASTVPKPPWPCRSRLRALPGDSW 273
RC+ + P PP PC+S ++ P W
Sbjct: 229 RCNLVSSPDPPMPCKSDNQSCPYYYW 254
>At3g50100.1 68416.m05477 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 406
Score = 27.5 bits (58), Expect = 5.7
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 254 QQLNAFAKSLQGA-LGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 421
Q L+ K LQ L NG KE L +N + ++ R++H D+ + T ++K
Sbjct: 11 QVLDELVKLLQSRDLRGENGNWKEFLHVYDKNADSPSDPSRRSHEDLVQFLTTFKKK 67
>At5g55100.2 68418.m06869 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 844
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 316 GLAVRVSERSLETLGEGVELLQHGLGAVLP 227
G+ +R + E +G V+ +HG G+VLP
Sbjct: 396 GVIIRKEDVKQEKMGNAVKDSKHGFGSVLP 425
>At5g55100.1 68418.m06868 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 843
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -3
Query: 316 GLAVRVSERSLETLGEGVELLQHGLGAVLP 227
G+ +R + E +G V+ +HG G+VLP
Sbjct: 396 GVIIRKEDVKQEKMGNAVKDSKHGFGSVLP 425
>At5g51370.1 68418.m06369 F-box family protein similar to unknown
protein (emb|CAB82288.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 355
Score = 27.1 bits (57), Expect = 7.5
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 261 SCCSTDSEPSFQALLKSCASFDLVSELNCC 172
SC D+ P + LL+SC + + + CC
Sbjct: 286 SCRKIDASPGPEKLLRSCPAMESLQLKRCC 315
>At5g33380.1 68418.m03963 hypothetical protein
Length = 154
Score = 27.1 bits (57), Expect = 7.5
Identities = 25/81 (30%), Positives = 36/81 (44%)
Frame = +2
Query: 233 DGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATAL 412
DGS+S + L KS +G+A G + + + + ++ EEL A + EK A
Sbjct: 18 DGSQSDTKPLLQRRKSHPPTIGEAGGSSWQDAPEPQVLLKVKIEELYFAPEETEKLLQAA 77
Query: 413 REKLQAAVQNTVQESQKLAKK 475
A Q T Q K AKK
Sbjct: 78 HVLEIARAQKTKQ--TKKAKK 96
>At4g18880.1 68417.m02784 heat shock transcription factor 21 (HSF21)
identical to heat shock transcription factor 21
[Arabidopsis thaliana] GI:3399765; contains Pfam
profile: PF00447 HSF-type DNA-binding domain
Length = 401
Score = 27.1 bits (57), Expect = 7.5
Identities = 32/130 (24%), Positives = 54/130 (41%)
Frame = +2
Query: 119 DFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALG 298
DF + H K H+ +SL + AQ + + Q+ K +G L
Sbjct: 90 DFVRGQPHLMKNIHRRKPVHSHSLPNLQ-AQ-LNPLTDSERVRMNNQIERLTKEKEGLLE 147
Query: 299 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKV 478
+ + + +E R+ E +EL++ +EK R+K + + V E LA +
Sbjct: 148 ELHKQDEE-----REVFEMQVKELKERLQHMEK-----RQKTMVSFVSQVLEKPGLALNL 197
Query: 479 SSNVQETNEK 508
S V ETNE+
Sbjct: 198 SPCVPETNER 207
>At3g56150.1 68416.m06241 eukaryotic translation initiation factor 3
subunit 8 / eIF3 p110 / eIF3c / p105 (TIF3C1) nearly
identical to SP|O49160 Eukaryotic translation initiation
factor 3 subunit 8 (eIF3 p110) (eIF3c) (p105)
{Arabidopsis thaliana}
Length = 900
Score = 27.1 bits (57), Expect = 7.5
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +2
Query: 95 AMVRRDAPDFFKD---IEHHTKEFHKTLEQQFNSLTKSKDAQDFSKA---WKDGSESVLQ 256
A + R +FFK I+ HT+E+ + L + L +++ QD+ + +K ++ L+
Sbjct: 358 AFLERVDTEFFKSLQCIDPHTREYVERLRDEPMFLALAQNIQDYFERMGDFKAAAKVALR 417
Query: 257 QLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAE 364
++ A Q + DA K E +E+ + E E
Sbjct: 418 RVEAIYYKPQ-EVYDAMRKLAELVEEEEETEEAKEE 452
>At3g05270.1 68416.m00575 expressed protein similar to
endosome-associated protein (EEA1) (GI:1016368) [Homo
sapiens]; similar to smooth muscle myosin heavy chain
(GI:4417214) [Homo sapiens; contains Pfam profile
PF05911: Plant protein of unknown function (DUF869)
Length = 615
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +2
Query: 314 AKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQ 493
AKEA E + E + DVE A +L K++ ++++ ++ + L+ K +S
Sbjct: 486 AKEAAEDGLKAANGKTEAIESRLKDVEAEAESLILKIK-SLEDVTEKERALSAKHNSKCN 544
Query: 494 ETNEKLA 514
E ++++
Sbjct: 545 ELQDEIS 551
>At2g35070.1 68415.m04302 expressed protein
Length = 158
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = +2
Query: 257 QLNAFAKSLQGALGDANGKAKEALEQSRQ-NIERTAEELRKAHPDVEK 397
Q A ++ GK K + +S + R AEE RK D+EK
Sbjct: 46 QAEALTGAITSGFESVMGKVKADIAKSEEYKSTRVAEEFRKMRADIEK 93
>At2g01680.1 68415.m00095 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 532
Score = 27.1 bits (57), Expect = 7.5
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 272 AKSLQGALGDANGKAKEAL---EQSRQNIERTAEELRKAHPDVEKNAT 406
A++L+ A+ D + + L E++ + + A+ELRK H + +N T
Sbjct: 304 ARALKRAVSDIKHEVQSQLLQNEKTNRRVSGIAKELRKLHREAVQNTT 351
>At1g77580.2 68414.m09032 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 779
Score = 27.1 bits (57), Expect = 7.5
Identities = 28/102 (27%), Positives = 49/102 (48%)
Frame = +2
Query: 128 KDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDAN 307
KD E + ++ + + S T S + + + KD +++ ++L+A AL AN
Sbjct: 25 KDSEIQPESTMESRDDEIQSPTVSLEVETEKEELKDSMKTLAEKLSA-------AL--AN 75
Query: 308 GKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 433
AK+ L +Q++ + AEE E L+EKL+AA
Sbjct: 76 VSAKDDLV--KQHV-KVAEEAVAGWEKAENEVVELKEKLEAA 114
>At1g12210.1 68414.m01413 disease resistance protein (CC-NBS-LRR
class), putative domain signature CC-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 885
Score = 27.1 bits (57), Expect = 7.5
Identities = 21/64 (32%), Positives = 30/64 (46%)
Frame = +2
Query: 185 SLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAE 364
SL+ ++ FS+ W S S +Q L+ SLQ A+G N K + Q R N E
Sbjct: 8 SLSCDREVNQFSQ-WLCVSGSYIQNLSENLASLQKAMGVLNAKRDDV--QGRINREEFTG 64
Query: 365 ELRK 376
R+
Sbjct: 65 HRRR 68
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/52 (25%), Positives = 27/52 (51%)
Frame = +2
Query: 341 QNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQE 496
+ +R A+ R+ + NA +R+K QA ++ ++ KK+SS + +
Sbjct: 345 EEAKREAKRQREIAENEFANAKKIRQKAQAELERAKFLKEQSMKKISSTIMQ 396
>At1g77580.1 68414.m09033 myosin heavy chain-related low similarity
to SP|P08799 Myosin II heavy chain, non muscle
{Dictyostelium discoideum}
Length = 629
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/64 (32%), Positives = 31/64 (48%)
Frame = +2
Query: 242 ESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREK 421
E + + A+ L AL AN AK+ L +Q++ + AEE E L+EK
Sbjct: 22 EELKDSMKTLAEKLSAAL--ANVSAKDDLV--KQHV-KVAEEAVAGWEKAENEVVELKEK 76
Query: 422 LQAA 433
L+AA
Sbjct: 77 LEAA 80
>At1g33910.1 68414.m04203 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
SP|P54120 AIG1 protein {Arabidopsis thaliana}; contains
Pfam profile PF04548: AIG1 family
Length = 301
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/77 (19%), Positives = 35/77 (45%)
Frame = +2
Query: 167 LEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQN 346
+EQ+ +K + + + K S QQ+N A+ ++ L +++ + L +
Sbjct: 221 MEQEMEVQSKKPENTEVEEMKKQLEISYGQQMNMMAQMVEDTLKESSASHERMLLALKDK 280
Query: 347 IERTAEELRKAHPDVEK 397
+ER+ E H + ++
Sbjct: 281 VERSYLENEDMHNETKR 297
>At1g06530.1 68414.m00692 myosin heavy chain-related similar to
myosin heavy chain (GI:1408194) {Placopecten
magellanicus}; similar to Myosin heavy chain, clone 203
(Fragment) (SP:P39922){Hydra attenuata}; contains one
transmembrane domain
Length = 323
Score = 26.6 bits (56), Expect = 9.9
Identities = 20/85 (23%), Positives = 42/85 (49%)
Frame = +2
Query: 236 GSESVLQQLNAFAKSLQGALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALR 415
G +V ++ K L+ LG + KE E++++ R EE+R+ + EK L+
Sbjct: 155 GLRTVKEENEKRMKELESKLGAL--EVKELDEKNKKF--RAEEEMREKIDNKEKEVHDLK 210
Query: 416 EKLQAAVQNTVQESQKLAKKVSSNV 490
EK+++ + + +L K ++ +
Sbjct: 211 EKIKSLESDVAKGKTELQKWITEKM 235
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,725,489
Number of Sequences: 28952
Number of extensions: 152255
Number of successful extensions: 901
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 895
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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