Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= epV31551
         (516 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.     31   3.2  
BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2...    30   5.5  
BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2...    30   5.5  
BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.       30   5.5  
AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.     30   5.5  
BC096288-1|AAH96288.1|  436|Homo sapiens glial cells missing hom...    29   9.7  
AL512347-2|CAI14905.1|  436|Homo sapiens glial cells missing hom...    29   9.7  
AB047819-1|BAB18039.1|  436|Homo sapiens chorion-specific transc...    29   9.7  
AB041714-1|BAA94757.1|  436|Homo sapiens chorion-specific transc...    29   9.7  
AB026493-1|BAA77250.2|  436|Homo sapiens GCM motif protein protein.    29   9.7  

>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
          Length = 2414

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
 Frame = -3

Query: 370  PFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVL-PQYFKQPNMFFKKVLVY-- 200
            P  LF F +  +  P +S  F S    +     P+  P+L P  F+ P +  +  +++  
Sbjct: 1151 PVSLFSFQHLVQHEPGQSPEFFSTQAMSSLLSSPYSMPLLPPSLFQAPPLPLQPTVLHPG 1210

Query: 199  --HEGELFPYLFNIPHYTP 149
              H  +L P+  NIP   P
Sbjct: 1211 QLHLPQLMPHPANIPFRQP 1229


>BC112226-1|AAI12227.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 448 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 272
           +PT  ++ SS   P++ +LP   Y   P Q+ V  YP    P  ++ ++   P + P  Y
Sbjct: 147 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 203

Query: 271 -PFDRPVLPQYFKQPNM 224
            P     LPQ  +QP +
Sbjct: 204 SPQRGQQLPQPSQQPGL 220


>BC104995-1|AAI04996.2|  637|Homo sapiens R3H domain containing 2
           protein.
          Length = 637

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 448 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 272
           +PT  ++ SS   P++ +LP   Y   P Q+ V  YP    P  ++ ++   P + P  Y
Sbjct: 147 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 203

Query: 271 -PFDRPVLPQYFKQPNM 224
            P     LPQ  +QP +
Sbjct: 204 SPQRGQQLPQPSQQPGL 220


>BC041857-1|AAH41857.1|  681|Homo sapiens R3HDM2 protein protein.
          Length = 681

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 448 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 272
           +PT  ++ SS   P++ +LP   Y   P Q+ V  YP    P  ++ ++   P + P  Y
Sbjct: 191 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 247

Query: 271 -PFDRPVLPQYFKQPNM 224
            P     LPQ  +QP +
Sbjct: 248 SPQRGQQLPQPSQQPGL 264


>AB023219-1|BAA76846.2|  962|Homo sapiens KIAA1002 protein protein.
          Length = 962

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
 Frame = -3

Query: 448 IPTDMFN-SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGY 272
           +PT  ++ SS   P++ +LP   Y   P Q+ V  YP    P  ++ ++   P + P  Y
Sbjct: 472 LPTSNYSTSSHAPPTQQVLPPQGYMQPPQQIQVSYYPPGQYPNSNQQYR---PLSHPVAY 528

Query: 271 -PFDRPVLPQYFKQPNM 224
            P     LPQ  +QP +
Sbjct: 529 SPQRGQQLPQPSQQPGL 545


>BC096288-1|AAH96288.1|  436|Homo sapiens glial cells missing
           homolog 1 (Drosophila) protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = -3

Query: 427 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
           S +    R  L    Y  +PF L  +   + P+   SEPF   +P   P       P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357

Query: 247 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 170
                 Y ++ ++ F   +    YH  +  P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391


>AL512347-2|CAI14905.1|  436|Homo sapiens glial cells missing
           homolog 1 (Drosophila) protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = -3

Query: 427 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
           S +    R  L    Y  +PF L  +   + P+   SEPF   +P   P       P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357

Query: 247 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 170
                 Y ++ ++ F   +    YH  +  P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391


>AB047819-1|BAB18039.1|  436|Homo sapiens chorion-specific
           transcription factor GCMa protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = -3

Query: 427 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
           S +    R  L    Y  +PF L  +   + P+   SEPF   +P   P       P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357

Query: 247 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 170
                 Y ++ ++ F   +    YH  +  P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391


>AB041714-1|BAA94757.1|  436|Homo sapiens chorion-specific
           transcription factor GCMa protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = -3

Query: 427 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
           S +    R  L    Y  +PF L  +   + P+   SEPF   +P   P       P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357

Query: 247 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 170
                 Y ++ ++ F   +    YH  +  P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391


>AB026493-1|BAA77250.2|  436|Homo sapiens GCM motif protein protein.
          Length = 436

 Score = 29.1 bits (62), Expect = 9.7
 Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
 Frame = -3

Query: 427 SSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
           S +    R  L    Y  +PF L  +   + P+   SEPF   +P   P       P+ P
Sbjct: 298 SKNAALGRNHLADNCYSNYPFPLTSWPCSFSPSQNSSEPFYQQLPLEPPAAKTGCPPLWP 357

Query: 247 Q-----YFKQPNMFFKKVL---VYHEGELFPYLF 170
                 Y ++ ++ F   +    YH  +  P+LF
Sbjct: 358 NPAGNLYEEKVHVDFNSYVQSPAYHSPQEDPFLF 391


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,406,830
Number of Sequences: 237096
Number of extensions: 1482983
Number of successful extensions: 3310
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3240
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3310
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)