Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31551
(516 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1 ... 31 0.46
At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1 ... 31 0.46
At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical ... 31 0.61
At3g03480.1 68416.m00346 transferase family protein similar to h... 31 0.61
At1g10760.1 68414.m01231 starch excess protein (SEX1) identical ... 29 1.9
At4g13390.1 68417.m02092 proline-rich extensin-like family prote... 29 2.5
At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransfera... 28 3.2
At5g06630.1 68418.m00749 proline-rich extensin-like family prote... 28 3.2
At4g18030.1 68417.m02684 dehydration-responsive family protein s... 28 4.3
At3g28550.1 68416.m03565 proline-rich extensin-like family prote... 28 4.3
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 28 4.3
At1g23720.1 68414.m02994 proline-rich extensin-like family prote... 28 4.3
At3g47770.1 68416.m05204 ABC transporter family protein AbcA, Di... 27 7.5
At5g54350.1 68418.m06768 expressed protein ; expression support... 27 9.9
At5g10350.1 68418.m01200 polyadenylate-binding protein family pr... 27 9.9
At5g09410.1 68418.m01090 calmodulin-binding protein similar to a... 27 9.9
At3g54590.1 68416.m06040 proline-rich extensin-like family prote... 27 9.9
At3g54580.1 68416.m06039 proline-rich extensin-like family prote... 27 9.9
At3g22800.1 68416.m02874 leucine-rich repeat family protein / ex... 27 9.9
At2g24980.1 68415.m02987 proline-rich extensin-like family prote... 27 9.9
>At1g02190.2 68414.m00150 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 623
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 288 TNHSVIHSIAPFFLSTSNNLTCS-SRRSWSTMKENYSPIYLTFLTIH 151
TN+S+ I F T++NLT S RS +E+ I+LT LT H
Sbjct: 257 TNYSLFMPIYDFIYGTTDNLTDSLYERSLEIEEESPDVIHLTHLTTH 303
>At1g02190.1 68414.m00149 CER1 protein, putative similar to CER1
GI:1199467 and maize gl1 homolog (glossy1 locus)
GI:1209703 from [Arabidopsis thaliana]
Length = 627
Score = 31.1 bits (67), Expect = 0.46
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = -1
Query: 288 TNHSVIHSIAPFFLSTSNNLTCS-SRRSWSTMKENYSPIYLTFLTIH 151
TN+S+ I F T++NLT S RS +E+ I+LT LT H
Sbjct: 257 TNYSLFMPIYDFIYGTTDNLTDSLYERSLEIEEESPDVIHLTHLTTH 303
>At3g13530.1 68416.m01701 MAP3K epsilon protein kinase identical to
MAP3K epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1368
Score = 30.7 bits (66), Expect = 0.61
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 318 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 434
D +G G+YG N +V + +SLE IV E+LN
Sbjct: 24 DEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIVQEDLN 62
>At3g03480.1 68416.m00346 transferase family protein similar to
hypersensitivity-related gene GB:CAA64636 [Nicotiana
tabacum]; contains Pfam transferase family domain
PF00248
Length = 454
Score = 30.7 bits (66), Expect = 0.61
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = -3
Query: 415 MPSRLMLPKGTYDGFPFQLF----VFVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLP 248
M ++ LP+ T G F++ V P +PTP+E +P S + D + G F PV+
Sbjct: 1 MDHQVSLPQSTTTGLSFKVHRQQRELVTPAKPTPRELKPL-SDIDDQQ--GLRFQIPVI- 56
Query: 247 QYFKQPNM 224
+F +PN+
Sbjct: 57 -FFYRPNL 63
>At1g10760.1 68414.m01231 starch excess protein (SEX1) identical to
SEX1 [Arabidopsis thaliana] GI:12044358; supporting cDNA
gi|12044357|gb|AF312027.1|AF312027
Length = 1399
Score = 29.1 bits (62), Expect = 1.9
Identities = 18/49 (36%), Positives = 26/49 (53%)
Frame = +3
Query: 297 TTDLNGSDSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELNMSV 443
T+DL G+ S +G Y SW G P+ V L E ++SE+ N +V
Sbjct: 1089 TSDLVGAKSRNIG-YLKGKVPSWVGIPTSVALPFGVFEKVISEKANQAV 1136
>At4g13390.1 68417.m02092 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 429
Score = 28.7 bits (61), Expect = 2.5
Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 1/98 (1%)
Frame = -3
Query: 445 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 266
P ++NS P P Y P +VY P P PF V + P Y +
Sbjct: 342 PPYVYNSPPPPPYYSPSPTVNYKSPPPP---YVYNSPPPPPYYSPFPKVEYKSPPPPYIY 398
Query: 265 DRPVLPQYFK-QPNMFFKKVLVYHEGELFPYLFNIPHY 155
+ P P Y+ P + +K PY++ P+Y
Sbjct: 399 NSPPPPPYYSPSPKITYKSPPP-------PYIYKTPYY 429
>At5g14580.1 68418.m01710 polyribonucleotide nucleotidyltransferase,
putative similar to Swiss-Prot:P05055 polyribonucleotide
nucleotidyltransferase (EC 2.7.7.8) (Polynucleotide
phosphorylase) (PNPase) [Escherichia coli]
Length = 991
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 273 IHSIAPFFLSTSNNLTCSSRRSWSTMKENYS 181
+ S++P ST++NL S+ STMKEN S
Sbjct: 877 LKSVSPKNNSTASNLVSFSKAKKSTMKENLS 907
>At5g06630.1 68418.m00749 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 440
Score = 28.3 bits (60), Expect = 3.2
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 215
+VY P P S P V + P Y + P P Y PN+++K
Sbjct: 308 YVYSSPPPPYYS-PSPKVYYKSPPPPYVYSSPPPPYYSPSPNVYYK 352
>At4g18030.1 68417.m02684 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 621
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = -3
Query: 349 VYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGE 188
+Y P ++E + +VP K + PF P Y N FK + V G+
Sbjct: 113 IYRERHCPPDNEKLRCLVPAPKGYMTPFPWPKSRDYVHYANAPFKSLTVEKAGQ 166
>At3g28550.1 68416.m03565 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 1018
Score = 27.9 bits (59), Expect = 4.3
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 215
+VY P P S P VV + P Y + P P Y P +++K
Sbjct: 567 YVYSSPPPPYYS-PSPKVVYKSPPPPYVYSSPPPPYYSPSPKVYYK 611
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 27.9 bits (59), Expect = 4.3
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 318 DSLGVGSYG*TNTNSWKGNPSYVPLGSISLEGIVSEELN 434
D +G G+YG N +V + +SLE I E+LN
Sbjct: 24 DEIGKGAYGRVYIGLDLENGDFVAIKQVSLENIGQEDLN 62
>At1g23720.1 68414.m02994 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 895
Score = 27.9 bits (59), Expect = 4.3
Identities = 22/77 (28%), Positives = 27/77 (35%)
Frame = -3
Query: 445 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 266
P SS P PK TY P +VY P P P V + P Y +
Sbjct: 710 PPPYVYSSPPPPYYSPSPKPTYKSPPPP---YVYSSPPPPPYYSPSPKVEYKSPPPPYVY 766
Query: 265 DRPVLPQYFKQPNMFFK 215
P P Y P + +K
Sbjct: 767 SSPPPPYYSPSPKVEYK 783
Score = 27.5 bits (58), Expect = 5.7
Identities = 30/102 (29%), Positives = 38/102 (37%), Gaps = 3/102 (2%)
Frame = -3
Query: 445 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 266
P SS P PK TY P +VY P P S P VV + P Y +
Sbjct: 433 PPPYVYSSPPPPYYSPSPKLTYKSSPPP---YVYSSPPPPYYS-PSPKVVYKSPPPPYVY 488
Query: 265 DRPVLPQYFKQPNMFFKKVLVYHEGELFPYLFNI---PHYTP 149
P P Y P +K PY++N P+Y+P
Sbjct: 489 SSPPPPYYSPSPKPSYKSPPP-------PYVYNSPPPPYYSP 523
>At3g47770.1 68416.m05204 ABC transporter family protein AbcA,
Dictyostelium discoideum, U66526
Length = 900
Score = 27.1 bits (57), Expect = 7.5
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = -1
Query: 264 IAPFFLSTSN-----NLTCSSRRSWSTMKENYSPIYLTFLTIHQIKRNYNALISKSKRTQ 100
+A FL+ +N NLT R WS ++ P+YL + + I+ +++L++ S Q
Sbjct: 5 VAASFLTQANALFKKNLTYQKRNIWSNVRLIVIPLYLCVVLV-CIQAVFDSLVNNSVDNQ 63
Query: 99 TIC 91
C
Sbjct: 64 CGC 66
>At5g54350.1 68418.m06768 expressed protein ; expression supported
by MPSS
Length = 279
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 291 SGTTDLNGSDSLGVGSYG*TNTNSWKG-NPSY 383
S T D+N +LG S+ TN +SW +PS+
Sbjct: 114 SSTNDINLDLTLGPSSWSNTNPSSWSNTDPSF 145
>At5g10350.1 68418.m01200 polyadenylate-binding protein family
protein / PABP family protein contains weak similarity
to poly(A) binding protein II from [Mus musculus]
GI:2351846, [Xenopus laevis] GI:11527140; contains
InterPro entry IPR000504: RNA-binding region RNP-1 (RNA
recognition motif) (RRM)
Length = 217
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -3
Query: 289 NKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPY 176
N GY F RP +P YF P + K PY
Sbjct: 179 NPSMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPY 216
>At5g09410.1 68418.m01090 calmodulin-binding protein similar to
anther ethylene-upregulated calmodulin-binding protein
ER1 GI:11612392 from [Nicotiana tabacum]
Length = 1007
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Frame = -1
Query: 258 PFFLSTSNNLTCSSRR-----SWSTMKENYSPIYLTFLTIHQIKRNYNALIS 118
PF+++ SN CS R S ST K N + +Y T+ ++ + +++
Sbjct: 479 PFYVTCSNRFACSEVREFDFLSGSTQKINATDVYGTYTNEASLQLRFEKMLA 530
>At3g54590.1 68416.m06040 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 743
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/83 (27%), Positives = 31/83 (37%)
Frame = -3
Query: 463 LDQGKIPTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNK 284
+D P SS P+ PK Y P +VY P P S P V +
Sbjct: 341 VDYKSPPPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVEYKSP 396
Query: 283 PFGYPFDRPVLPQYFKQPNMFFK 215
P Y + P P Y P +++K
Sbjct: 397 PPPYVYSSPPPPTYSPSPKVYYK 419
>At3g54580.1 68416.m06039 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 951
Score = 26.6 bits (56), Expect = 9.9
Identities = 22/77 (28%), Positives = 29/77 (37%)
Frame = -3
Query: 445 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 266
P SS P+ PK Y P +VY P P S P V + P Y +
Sbjct: 447 PPPYVYSSPPPPTYSPSPKVDYKSPPPP---YVYSSPPPPYYS-PSPKVYYKSPPPPYVY 502
Query: 265 DRPVLPQYFKQPNMFFK 215
P P Y P +++K
Sbjct: 503 SSPPPPYYSPSPKVYYK 519
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/45 (28%), Positives = 18/45 (40%)
Frame = -3
Query: 349 VYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 215
VY P P P V + P Y + P P Y P +++K
Sbjct: 541 VYYKSPPPPYYSPSPKVYYKSPPPPYVYSSPPPPYYSPSPKVYYK 585
Score = 26.6 bits (56), Expect = 9.9
Identities = 23/77 (29%), Positives = 28/77 (36%)
Frame = -3
Query: 445 PTDMFNSSDTMPSRLMLPKGTYDGFPFQLFVFVYPYEPTPKESEPFKSVVPDNKPFGYPF 266
P SS P PK Y P V V P P P P VV + P Y +
Sbjct: 663 PPPYVYSSPPPPYYSPSPKVYYKSPPHP-HVCVCP--PPPPCYSPSPKVVYKSPPPPYVY 719
Query: 265 DRPVLPQYFKQPNMFFK 215
P P Y P +++K
Sbjct: 720 SSPPPPHYSPSPKVYYK 736
>At3g22800.1 68416.m02874 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycsimilar to extensin-like protein [Lycopersicon
esculentum] gi|5917664|gb|AAD55979; contains
leucine-rich repeats, Pfam:PF00560; contains proline
rich extensin domains, INTERPRO:IPR002965
Length = 470
Score = 26.6 bits (56), Expect = 9.9
Identities = 15/41 (36%), Positives = 17/41 (41%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQP 230
+VYP P P S P P P+ YP P P Y P
Sbjct: 408 YVYPSPPPPPPSPPPYVYPPPPPPYVYP--PPPSPPYVYPP 446
>At2g24980.1 68415.m02987 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 559
Score = 26.6 bits (56), Expect = 9.9
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 3/71 (4%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFKKVLVYHEGELFPYL 173
+VY P P S P V + P Y + P P Y P VY++ PY+
Sbjct: 352 YVYSSPPPPYYS-PSPKVYYKSPPPPYVYSSPPPPYYSPSPK-------VYYKSPPPPYV 403
Query: 172 FNI---PHYTP 149
+N P+Y+P
Sbjct: 404 YNSPPPPYYSP 414
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 215
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 452 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 496
Score = 26.6 bits (56), Expect = 9.9
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = -3
Query: 352 FVYPYEPTPKESEPFKSVVPDNKPFGYPFDRPVLPQYFKQPNMFFK 215
+VY P P S P V + P Y + P P Y P +++K
Sbjct: 477 YVYSSPPPPYYS-PSPKVYYKSPPPSYVYSSPPPPYYSPSPKVYYK 521
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,221,962
Number of Sequences: 28952
Number of extensions: 218000
Number of successful extensions: 821
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 808
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 937669760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -