Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31549
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127; Euka... 219 4e-56
UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes ... 216 2e-55
UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4; Eukary... 182 6e-45
UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5; Magnol... 168 7e-41
UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protei... 139 3e-32
UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n... 95 4e-32
UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia... 128 7e-29
UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative; n... 128 7e-29
UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of cy... 122 4e-27
UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1; O... 112 4e-24
UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7; T... 111 1e-23
UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1; Guilla... 108 8e-23
UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2; Neoptera... 103 3e-21
UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1; Enceph... 93 5e-18
UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum... 67 2e-10
UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45; root|... 67 3e-10
UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus ... 64 1e-09
UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1; Methan... 61 1e-08
UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11; Eurya... 55 1e-06
UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1; Archae... 54 2e-06
UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5; Thermo... 54 3e-06
UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1; Arabido... 53 4e-06
UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum ... 52 1e-05
UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1; Nanoar... 50 2e-05
UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum... 50 4e-05
UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4; Haloba... 50 4e-05
UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal ... 49 6e-05
UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4; Entamoeba|... 49 6e-05
UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;... 48 1e-04
UniRef50_Q53K43 Cluster: Retrotransposon protein, putative, uncl... 48 2e-04
UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured... 47 3e-04
UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiel... 46 4e-04
UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropy... 45 0.001
UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3; Sulfol... 44 0.002
UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6; Methan... 43 0.004
UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32; Bacter... 40 0.045
UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12; Bacter... 39 0.078
UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 39 0.078
UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;... 38 0.10
UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4; Thermo... 38 0.14
UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondria... 35 1.3
UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1; ... 34 1.7
UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage Barnyard... 34 1.7
UniRef50_Q9HKW8 Cluster: Transposase related protein; n=2; Therm... 34 2.2
UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1; Tr... 33 2.9
UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,... 33 5.1
UniRef50_UPI0000E4735E Cluster: PREDICTED: similar to pats1; n=2... 32 6.8
UniRef50_Q5KRC3 Cluster: Putative uncharacterized protein; n=2; ... 32 6.8
UniRef50_O44496 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3; Bacteri... 32 8.9
UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast ... 32 8.9
>UniRef50_Q9VNE9 Cluster: 60S ribosomal protein L13A; n=127;
Eukaryota|Rep: 60S ribosomal protein L13A - Drosophila
melanogaster (Fruit fly)
Length = 205
Score = 219 bits (534), Expect = 4e-56
Identities = 95/170 (55%), Positives = 124/170 (72%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KV VVRCE++N+SG+F+RNK+K +++LRKRCNVNPARGPFHFRAPS+I +K VRGMIPHK
Sbjct: 34 KVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHK 93
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T+RG+ AL RLR +DG P P+D L+ R YC VGRLSHE+GW Y+D
Sbjct: 94 TKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQD 153
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
V++ LE KRK K + + ++LK++T A E ++KA PF II+SYGY
Sbjct: 154 VIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAKAAEPFNKIIKSYGY 203
>UniRef50_Q1HR63 Cluster: 60S ribosomal protein L13a; n=2; Aedes
aegypti|Rep: 60S ribosomal protein L13a - Aedes aegypti
(Yellowfever mosquito)
Length = 236
Score = 216 bits (528), Expect = 2e-55
Identities = 94/170 (55%), Positives = 121/170 (71%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KVVVVRCE + +SG+FFRNK+K +++LRKRCNVNPARGPFHFRAPS++LWK VRGM+PHK
Sbjct: 34 KVVVVRCEDLQLSGHFFRNKIKFLAYLRKRCNVNPARGPFHFRAPSRMLWKAVRGMVPHK 93
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T+RG NAL+RL+ Y+G P PFD CL+P R +C VGR++HE+GWKYRD
Sbjct: 94 TKRGHNALKRLKVYEGIPSPFDRQKRLCVPTAMRQLCLRPDRKFCDVGRVAHEVGWKYRD 153
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
VV LE KRK K+ + KKLK++T A V+ +++ YGY
Sbjct: 154 VVNNLEAKRKIKSRLSYLHSKKLKKLTWKARTAVADKVKDQDAVLRKYGY 203
>UniRef50_P93099 Cluster: 60S ribosomal protein L13a; n=4;
Eukaryota|Rep: 60S ribosomal protein L13a - Cyanophora
paradoxa
Length = 200
Score = 182 bits (442), Expect = 6e-45
Identities = 82/170 (48%), Positives = 111/170 (65%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
+VV VR E+INISG+ FRNKLK +FL+KR N NP RGPFHFR+P++ILW+T+RGMIPHK
Sbjct: 31 RVVAVRTEEINISGSLFRNKLKFHAFLKKRMNTNPRRGPFHFRSPARILWRTIRGMIPHK 90
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T RG AL RL+ ++G PPP+D LKPGR +C +GRL+ E+GW++ D
Sbjct: 91 TPRGAAALERLKAFEGVPPPYDKMKRMVIPQALRVLRLKPGRKFCVLGRLATEVGWRHSD 150
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
+V +LE+KRK K+ A +K L + A V+ T + YG+
Sbjct: 151 LVTRLEEKRKTKSAAFYARKKTLVNLRAKAAVAVASKTANIQKELDHYGF 200
>UniRef50_Q6RH10 Cluster: 60S ribosomal protein L13a; n=5;
Magnoliophyta|Rep: 60S ribosomal protein L13a - Capsicum
annuum (Bell pepper)
Length = 220
Score = 168 bits (408), Expect = 7e-41
Identities = 76/148 (51%), Positives = 102/148 (68%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
+VVVVRCE+I +SG R K+K + FLRKR N P+ GP HFRAPSKILW+T+RGMIPHK
Sbjct: 37 RVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHK 96
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T+RG AL RL+ Y+G PPP+D L+ G YC +G+LS E+GW + D
Sbjct: 97 TKRGAAALARLKVYEGVPPPYDKIKRMVIPDALKVLRLQAGHKYCLLGKLSSEVGWNHYD 156
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITK 448
+++LEDKRK +A +V YE++ K++ K
Sbjct: 157 TIKELEDKRKERA--QVTYERR-KQLAK 181
>UniRef50_Q245E7 Cluster: Ribosomal protein L13 containing protein;
n=16; Alveolata|Rep: Ribosomal protein L13 containing
protein - Tetrahymena thermophila SB210
Length = 270
Score = 139 bits (337), Expect = 3e-32
Identities = 68/170 (40%), Positives = 98/170 (57%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
++VVVR E INISG+ FRN++K FL K N NP RG HFRAPS+I W+ VRGM+PHK
Sbjct: 103 RIVVVRTEAINISGSLFRNRVKFSEFLNKWMNHNPRRGVQHFRAPSRIFWRAVRGMLPHK 162
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T +G AL RL+ ++G P P+D L+ R C +G LS +GW +
Sbjct: 163 TPKGAAALERLKIFEGIPTPYDRVKKQVVVDALKVQRLRNSRPVCKLGDLSASVGWGKQT 222
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
++ KLE+KR+ +A + ++KK+K+ E + A + +GY
Sbjct: 223 LIEKLEEKRRARA--KTYHDKKVKQADARKKELAAPALKAIKDKLAQFGY 270
>UniRef50_UPI0000EB39CE Cluster: UPI0000EB39CE related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB39CE UniRef100
entry - Canis familiaris
Length = 172
Score = 94.7 bits (225), Expect(2) = 4e-32
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KVVVV E INISGNF+RNKLK ++FL K+ N NP+RGP+ F+APS+I W T RGM+PHK
Sbjct: 31 KVVVVHYEGINISGNFYRNKLKYLAFLCKQMNTNPSRGPYRFQAPSRIFWWTARGMLPHK 90
Query: 185 T 187
T
Sbjct: 91 T 91
Score = 65.7 bits (153), Expect(2) = 4e-32
Identities = 29/72 (40%), Positives = 46/72 (63%)
Frame = +2
Query: 296 LKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKA 475
LKP R + ++GRL+H++GWKY+ V LE+ RK KA +K+L R+ K A + V K
Sbjct: 98 LKPTRKFAYLGRLAHKVGWKYQAVTATLEENRKEKAKIHYWKKKQLMRLWKQAKKNVEKK 157
Query: 476 TTPFTTIIQSYG 511
T +T ++++G
Sbjct: 158 TDKYTEFLKTHG 169
>UniRef50_Q7R0D6 Cluster: GLP_608_8346_8939; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_608_8346_8939 - Giardia lamblia ATCC
50803
Length = 197
Score = 128 bits (309), Expect = 7e-29
Identities = 66/171 (38%), Positives = 96/171 (56%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 181
++V +VRCE+ ISG F K + + KR N N RGPFHFRAP++I+ +T+RGMIP+
Sbjct: 28 HEVALVRCEKAIISGAFRDVKAHYLKKMHKRTNFNHLRGPFHFRAPAEIVRRTIRGMIPY 87
Query: 182 KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYR 361
KT RG +A+ RLR YDG PP CL+P R C VGR++HEIGW++
Sbjct: 88 KTVRGSDAMSRLRVYDGIPPCCARYKRVVCPSAMAYLCLRPERRRCEVGRVAHEIGWQHA 147
Query: 362 DVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
V + E +R + K + ++ + +A EK ++ + YGY
Sbjct: 148 ADVERYEKRRLEECDKWYQDKIQIDKKIAEAAEKDAELQR-INAELAKYGY 197
>UniRef50_Q4Q3B9 Cluster: 60S ribosomal protein L13a, putative;
n=10; Trypanosomatidae|Rep: 60S ribosomal protein L13a,
putative - Leishmania major
Length = 222
Score = 128 bits (309), Expect = 7e-29
Identities = 67/172 (38%), Positives = 92/172 (53%), Gaps = 2/172 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
K+ VVRCEQ+NI+G RNK+K + +LRKR NP +GPFH RAPS + +TVR M+P
Sbjct: 50 KITVVRCEQLNIAGTEIRNKIKYLQYLRKRKLTNPTKGPFHHRAPSDVFVRTVRSMLPRY 109
Query: 185 TERGKNALRRLRTYDGCPP-PFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYR 361
T+RG AL L Y+G PP C + R Y +G + +GWKY
Sbjct: 110 TKRGMKALNSLVAYEGIPPNVVRTGGRVVIPRAQRHVCYRSERPYTVLGNMCKHVGWKYS 169
Query: 362 DVVRKLEDKRKGKAVKRVAYEKKLKRITKDA-GEKVSKATTPFTTIIQSYGY 514
DVV LE R KA + + KL+ K A E ++K +++ +GY
Sbjct: 170 DVVANLEKARVEKASRHHEKQAKLRDAWKSARKEALAKMPKHNVEVLKKFGY 221
>UniRef50_A4S5V9 Cluster: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit; n=2;
Ostreococcus|Rep: Ribosomal protein L13a, component of
cytosolic 80S ribosome and 60S large subunit -
Ostreococcus lucimarinus CCE9901
Length = 199
Score = 122 bits (295), Expect = 4e-27
Identities = 60/169 (35%), Positives = 89/169 (52%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
VVVVR E I +SG R ++ + KR N NP +GP+H+ +PS++ WKTVRGM+PHKT
Sbjct: 31 VVVVRTEGICMSGGMVRRRMAHDRYKNKRMNTNPKKGPYHYTSPSRLFWKTVRGMLPHKT 90
Query: 188 ERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDV 367
RG A R + Y+G P P+D L G +C +G +IGWK+ +
Sbjct: 91 VRGAAAFERFKAYEGIPAPYDKVKRAVVPEALKVLRLGEGHRFCVLGDFCEQIGWKHGAI 150
Query: 368 VRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
V++LE KR+ A + A +K+ A + +I++ GY
Sbjct: 151 VKELEAKRQTAASEYWAQKKEANSKFAAAKAAANAQLGDLQQLIEATGY 199
>UniRef50_Q75J15 Cluster: Putative ribosomal protein L13a; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
ribosomal protein L13a - Oryza sativa subsp. japonica
(Rice)
Length = 172
Score = 112 bits (270), Expect = 4e-24
Identities = 47/94 (50%), Positives = 61/94 (64%)
Frame = +2
Query: 92 RCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXX 271
R N P+ GP HFR+P+KILW+TVRGMIPHKT+RG+ AL RL+ Y+ PP+D
Sbjct: 40 RMNTKPSHGPIHFRSPAKILWRTVRGMIPHKTKRGEAALARLKAYEVVTPPYDRTKRMVI 99
Query: 272 XXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVR 373
L+PG YC +G+LS E+GW Y D +R
Sbjct: 100 PDALKVLRLQPGHKYCLLGQLSKEVGWNYYDTIR 133
>UniRef50_A2DZ26 Cluster: Ribosomal protein L13, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein L13,
putative - Trichomonas vaginalis G3
Length = 200
Score = 111 bits (266), Expect = 1e-23
Identities = 61/156 (39%), Positives = 84/156 (53%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KVVVVRCE+I ++G FL K N NP GPFH RAP +I + VRGMIP+K
Sbjct: 30 KVVVVRCEEIELNGQHKFTVHTYERFLNKTTNSNPRDGPFHQRAPHEIFARAVRGMIPYK 89
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
T RG +A L+ Y+G P + + + R +GRLS +GWKY +
Sbjct: 90 THRGADAFANLQCYEGIPAKYVSYKRLVIPHALRCVSIHTDRPTTKLGRLSTTMGWKYGN 149
Query: 365 VVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 472
VV +LE++RK ++ K +K + A EKV+K
Sbjct: 150 VVAQLEEQRKAESAKYFEAKKAAQDKRAAAIEKVNK 185
>UniRef50_Q98RZ9 Cluster: 60s ribosomal protein L13A; n=1;
Guillardia theta|Rep: 60s ribosomal protein L13A -
Guillardia theta (Cryptomonas phi)
Length = 194
Score = 108 bits (259), Expect = 8e-23
Identities = 54/149 (36%), Positives = 83/149 (55%), Gaps = 2/149 (1%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 181
+K++++R E +I+G RN K S +K+ N NP RGPFHF++PSKIL++T++ MIPH
Sbjct: 28 DKIIIIRSELTSITGKLGRNVNKYKSIFKKKTNTNPRRGPFHFKSPSKILYQTIKRMIPH 87
Query: 182 KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYR 361
KT RG AL+ L+ ++G P F +K R ++G++ +GWK R
Sbjct: 88 KTMRGSKALKNLKIFEGLPRIFSKIKKEKFFEAFRYKVIKNYRKTVNLGKVCEVLGWKNR 147
Query: 362 DVVRKLEDK--RKGKAVKRVAYEKKLKRI 442
+ + D+ GK V + E K RI
Sbjct: 148 KFIEQKSDQLAALGKVVLKKKKEIKKFRI 176
>UniRef50_Q4GXI8 Cluster: Ribomsomal protein L13Ae; n=2;
Neoptera|Rep: Ribomsomal protein L13Ae - Cicindela
campestris (Green tiger beetle)
Length = 78
Score = 103 bits (246), Expect = 3e-21
Identities = 41/74 (55%), Positives = 54/74 (72%)
Frame = +2
Query: 293 CLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 472
CLKPGR YCHVGRLSHE+GWKY+ V+ LE KR+ K + +K+KR+TK A +K+ K
Sbjct: 4 CLKPGRKYCHVGRLSHEVGWKYQKVIESLEHKRQVKVAIKARKHRKMKRLTKKASKKIEK 63
Query: 473 ATTPFTTIIQSYGY 514
P+T +I+SYGY
Sbjct: 64 QVAPYTAVIKSYGY 77
>UniRef50_Q8SS16 Cluster: 60S RIBOSOMAL PROTEIN L13A; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13A
- Encephalitozoon cuniculi
Length = 198
Score = 92.7 bits (220), Expect = 5e-18
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
+V VV E+ G+ R K +L KRC VNP RGPFHFR P L K +R MI +K
Sbjct: 32 RVTVVCAEEAVFVGSLERAMDKFKQYLNKRCLVNPRRGPFHFREPRMHLAKIIRRMISYK 91
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRD 364
RGK A+ RL TY+G P + + P R Y +G+L GWK+ +
Sbjct: 92 KPRGKAAMSRLATYEGIPRELEGQPRYKVTCAFVKYTGNPNR-YVTLGKLLSMFGWKHAE 150
Query: 365 VVRKLEDKRKGK----AVKRVAYEKKLKRITKD 451
+ L D+ K + ++++ +KK++ + D
Sbjct: 151 AAKSLTDELKERESLASLQKKDLDKKIEELKTD 183
>UniRef50_A0RXP5 Cluster: Ribosomal protein L13; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L13 - Cenarchaeum
symbiosum
Length = 139
Score = 67.3 bits (157), Expect = 2e-10
Identities = 36/117 (30%), Positives = 54/117 (46%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 181
N+V ++ CE++ ISG + FL+ ++P GP+H R P I+ + +RGM+P
Sbjct: 24 NRVSIINCEKVMISGKRASIVREYRDFLKIASIIHPEHGPYHPRRPDTIMTRMIRGMLPR 83
Query: 182 KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 352
K GK A RLR Y G P + +P NY + L +GW
Sbjct: 84 KKPSGKAAHSRLRAYIGSPGHLKSFEKRKLKGAE---ITRPTANYTTMADLGETVGW 137
>UniRef50_O59300 Cluster: 50S ribosomal protein L13P; n=45;
root|Rep: 50S ribosomal protein L13P - Pyrococcus
horikoshii
Length = 142
Score = 66.9 bits (156), Expect = 3e-10
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 2/120 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGN--FFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIP 178
+VV+V E+ I+GN +K K + LR NP RGPF+ + +I+ +T+RGM+P
Sbjct: 27 EVVIVNAEKAVITGNREVIFSKYKQRTGLRTL--TNPRRGPFYPKRSDEIVRRTIRGMLP 84
Query: 179 HKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKY 358
KT+RG+ A RRL+ Y G P F + +P Y VG ++ +G K+
Sbjct: 85 WKTDRGRKAFRRLKVYVGIPKEFQDKQLETIVEAHVSRLSRP--KYVTVGEVAKFLGGKF 142
>UniRef50_A7DRR6 Cluster: Ribosomal protein L13; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L13
- Candidatus Nitrosopumilus maritimus SCM1
Length = 154
Score = 64.5 bits (150), Expect = 1e-09
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH 181
++V +V CE+I SG + FL +NP GP H+R P I+ K +R M+P+
Sbjct: 38 HRVSIVNCEKIMYSGTRSNLIKEYREFLEINSIINPKHGPVHYRRPDTIITKMIRQMLPY 97
Query: 182 -KTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGW 352
+ GK +++RLR Y G P + K NY +G L IGW
Sbjct: 98 DRKPSGKESIKRLRAYIGSPKELKSLEKIQFEKAKIK---KSPSNYTTMGELCRVIGW 152
>UniRef50_Q8TVB6 Cluster: 50S ribosomal protein L13P; n=1;
Methanopyrus kandleri|Rep: 50S ribosomal protein L13P -
Methanopyrus kandleri
Length = 159
Score = 61.3 bits (142), Expect = 1e-08
Identities = 37/117 (31%), Positives = 59/117 (50%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
++ V+ E+ I+G +N +K +L+K +P +GPF+ R P I + VRGM+P K
Sbjct: 41 RIAVINTEKAIITGK--KNTIK-EEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRGMLPWK 97
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWK 355
T+RG+ A +RLR Y G P + Y +G LS E+G++
Sbjct: 98 TKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGELSEELGYQ 154
>UniRef50_Q8PW45 Cluster: 50S ribosomal protein L13P; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L13P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 140
Score = 54.8 bits (126), Expect = 1e-06
Identities = 33/118 (27%), Positives = 56/118 (47%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
KV ++ E+ ISG+ L + R GP+ + P +IL +T+RGM+P+K
Sbjct: 28 KVYIINAEKAIISGS---RAATLREYRETRDRGATEFGPYFPKRPDRILKRTIRGMLPYK 84
Query: 185 TERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKY 358
RG++A+ RL+ Y G P++ L Y +G +S ++G K+
Sbjct: 85 RARGRDAMSRLKVYVGV--PYELKGAETTTIADADMRLLSSNKYVELGEVSQKMGSKF 140
>UniRef50_O29137 Cluster: 50S ribosomal protein L13P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L13P -
Archaeoglobus fulgidus
Length = 156
Score = 54.0 bits (124), Expect = 2e-06
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
++VVV E+ I+G+ + + + K + +GP+ R P +I +TVRGM+P K
Sbjct: 42 RIVVVNAEKAVITGDKY---MVFERYKEKYDRGSKEKGPYFPRHPERIFKRTVRGMLPWK 98
Query: 185 TERGKNALRRLRTYDGCP 238
+ RG++A RRLR + G P
Sbjct: 99 SSRGRDAYRRLRVFMGVP 116
>UniRef50_Q8ZYQ1 Cluster: 50S ribosomal protein L13P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L13P -
Pyrobaculum aerophilum
Length = 187
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 5/83 (6%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRK----RCNVNPAR-GPFHFRAPSKILWKTVRG 169
++VVV E++ I+G+ K+ + F RK R + NP + GP R P ++ + VRG
Sbjct: 46 RIVVVNAEKLVITGD---EKMVIEWFKRKISEWRTHYNPEKAGPKVPRRPDRVFKRIVRG 102
Query: 170 MIPHKTERGKNALRRLRTYDGCP 238
M+P K+E G++AL+RLR Y P
Sbjct: 103 MLPKKSETGRSALKRLRVYMSIP 125
>UniRef50_Q9M3S6 Cluster: 60S L13 ribosomal protein; n=1;
Arabidopsis thaliana|Rep: 60S L13 ribosomal protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 61
Score = 52.8 bits (121), Expect = 4e-06
Identities = 21/60 (35%), Positives = 35/60 (58%)
Frame = +2
Query: 335 SHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSKATTPFTTIIQSYGY 514
+HE+GW+Y+ +V KLE+KRK K +K ++ + A EK T + +++ YGY
Sbjct: 1 AHEVGWQYQGIVEKLEEKRKVKGTAYYTKKKAEMKLKRQAIEKAKAKTAVYDKVLEQYGY 60
>UniRef50_A7D2Q7 Cluster: Ribosomal protein L13; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein L13 -
Halorubrum lacusprofundi ATCC 49239
Length = 149
Score = 51.6 bits (118), Expect = 1e-05
Identities = 27/77 (35%), Positives = 41/77 (53%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
V VV E+ I+GN + M R + GP++ + P +I + +RGM+P+KT
Sbjct: 36 VAVVNAERAVITGN----EEATMETYHTRAELGSDSGPYYPKRPDRIFKRAIRGMLPYKT 91
Query: 188 ERGKNALRRLRTYDGCP 238
E G+ AL +R Y G P
Sbjct: 92 EDGREALSNVRVYVGNP 108
>UniRef50_Q74ND7 Cluster: 50S ribosomal protein L13P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L13P -
Nanoarchaeum equitans
Length = 162
Score = 50.4 bits (115), Expect = 2e-05
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
+V +V E+ I+G+ N +K +L+K + +GPF+ + P IL + +RGM+P K
Sbjct: 32 RVKIVNAEKAIITGD--PNMVK-KEWLQKVKRGDYYKGPFYPKRPDNILKRVIRGMLPRK 88
Query: 185 TERGKNALRRLRTYDGCP 238
T RG+ L+ ++ Y G P
Sbjct: 89 TARGRELLKNVKVYIGVP 106
>UniRef50_A1RWV8 Cluster: Ribosomal protein L13; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L13 - Thermofilum
pendens (strain Hrk 5)
Length = 154
Score = 49.6 bits (113), Expect = 4e-05
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLK-LMSFLRKRCNVNPA-RGPFHFRAPSKILWKTVRGMI 175
++VVVV E+I I+G R K L ++ + NP RGP + + P ++ + VRGM+
Sbjct: 32 DRVVVVNAEKIVITGKPKRVVEKYLKRWVEWKTYYNPELRGPKYPKTPDRLFKRMVRGML 91
Query: 176 PHKTERGKNALRRLRTYDGCPPPFDN 253
P + G+++L+RL Y G P + N
Sbjct: 92 PMEKTIGRDSLKRLTVYVGLPDEYRN 117
>UniRef50_P29198 Cluster: 50S ribosomal protein L13P; n=4;
Halobacteriaceae|Rep: 50S ribosomal protein L13P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 145
Score = 49.6 bits (113), Expect = 4e-05
Identities = 26/77 (33%), Positives = 42/77 (54%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
V VV E+ I+G + +++ KR ++ G F+ + P I +T+RGM+PHK
Sbjct: 36 VAVVNAERAVITGR----EEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTIRGMLPHKK 91
Query: 188 ERGKNALRRLRTYDGCP 238
+RG+ A +R Y G P
Sbjct: 92 QRGREAFESVRVYLGNP 108
>UniRef50_UPI0000EBD60B Cluster: PREDICTED: similar to ribosomal
protein L13a; n=2; Bos taurus|Rep: PREDICTED: similar to
ribosomal protein L13a - Bos taurus
Length = 112
Score = 49.2 bits (112), Expect = 6e-05
Identities = 28/106 (26%), Positives = 45/106 (42%)
Frame = +2
Query: 74 MSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDN 253
+ + + NP+ GPF F P I TV+ ++P+K + + L L+ +D +
Sbjct: 6 LDLFHRPLDTNPSNGPFQFWVPKHIFRHTVQDLLPYKIKHDQETLEHLKVFDKTKQMIIS 65
Query: 254 XXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVRKLEDKR 391
CL G L++E GWKY+ V LE K+
Sbjct: 66 VQICVSEATSRFACL---------GYLTYESGWKYQVVTNTLEKKK 102
>UniRef50_O18718 Cluster: Ribosomal protein L13A; n=4;
Entamoeba|Rep: Ribosomal protein L13A - Entamoeba dispar
Length = 87
Score = 49.2 bits (112), Expect = 6e-05
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWK 157
K+V+VRCE + + G ++ + RKR N NP RG FH R+P++++ K
Sbjct: 37 KIVLVRCEDLQVCGTLKMRLVQWELYQRKRVNTNPTRGAFHHRSPAEMVRK 87
>UniRef50_Q9AVH9 Cluster: Putative senescence-associated protein;
n=1; Pisum sativum|Rep: Putative senescence-associated
protein - Pisum sativum (Garden pea)
Length = 255
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +2
Query: 14 VVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF 130
+VRCE+I ISG R K+K M FLR+R N P+ GP F
Sbjct: 21 LVRCEEICISGGLGRQKMKYMRFLRRRMNTKPSHGPITF 59
>UniRef50_Q53K43 Cluster: Retrotransposon protein, putative,
unclassified; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Retrotransposon protein, putative,
unclassified - Oryza sativa subsp. japonica (Rice)
Length = 512
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = +2
Query: 191 RGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHE 343
RG+ AL RL+ Y+G PPP+D L+PG YC +G+LS E
Sbjct: 9 RGEAALARLKAYEGVPPPYDRTKRMVIPDALKVLRLQPGHKYCLLGQLSKE 59
>UniRef50_Q2Q0G5 Cluster: Ribosomal protein L13P; n=1; uncultured
organism HF70_19B12|Rep: Ribosomal protein L13P -
uncultured organism HF70_19B12
Length = 161
Score = 46.8 bits (106), Expect = 3e-04
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPH- 181
+V+++ E ++G ++++ L + RK +P +GPF R P IL +TVRGM+P+
Sbjct: 38 RVIIINAEMAIVTGP--KDRI-LADYDRKYKLNHPRKGPFFPRMPDMILKRTVRGMLPYQ 94
Query: 182 KTERGKNALRRLRTYDGCP 238
K G+ A++ LR G P
Sbjct: 95 KKSSGRQAVKDLRVMIGTP 113
>UniRef50_Q3LWM1 Cluster: Ribosomal protein L13A; n=1; Bigelowiella
natans|Rep: Ribosomal protein L13A - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 181
Score = 46.4 bits (105), Expect = 4e-04
Identities = 28/143 (19%), Positives = 57/143 (39%)
Frame = +2
Query: 14 VVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTER 193
V+RC+ + SG + +++ + NP +GP+ F PS +L K V+GM+ +
Sbjct: 33 VIRCKDLVFSGRYEHVYNRILKKKNLKTRTNPNKGPYFFSNPSSLLKKIVKGMLNKLNKS 92
Query: 194 GKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGRNYCHVGRLSHEIGWKYRDVVR 373
+ + ++ P + + LKP + + + + GW+ R
Sbjct: 93 HTLLFKSVECFNDTPNRYIYNYKLFLKNSHKNYKLKPDSKFTKLYEILPKFGWQDRSSCT 152
Query: 374 KLEDKRKGKAVKRVAYEKKLKRI 442
+ K ++ KKL +
Sbjct: 153 ESNSKNGIRSTIYSFNSKKLNNL 175
>UniRef50_Q9YB50 Cluster: 50S ribosomal protein L13P; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L13P - Aeropyrum
pernix
Length = 155
Score = 44.8 bits (101), Expect = 0.001
Identities = 23/75 (30%), Positives = 34/75 (45%)
Frame = +2
Query: 131 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPPFDNXXXXXXXXXXXXFCLKPGR 310
R P ++ VRGM+P RG+ AL RLR Y G P D +
Sbjct: 79 RTPQRLFKHAVRGMLPKNKARGRRALARLRVYVGVP---DELKGREFVRFPEADASRLSS 135
Query: 311 NYCHVGRLSHEIGWK 355
+Y +G ++ ++GWK
Sbjct: 136 HYIELGAVARQLGWK 150
>UniRef50_P95991 Cluster: 50S ribosomal protein L13P; n=3;
Sulfolobaceae|Rep: 50S ribosomal protein L13P -
Sulfolobus solfataricus
Length = 149
Score = 44.0 bits (99), Expect = 0.002
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPAR-GPFHFRAPSKILWKTVRGMIPH 181
KV++V E+ ISG R L + NP R G R+P I+ +T+RGM+P
Sbjct: 35 KVIIVNGEKAVISGEKNRVIESYKLLLTVKTLFNPYRNGIRRPRSPINIVKRTIRGMLP- 93
Query: 182 KTERGKNALRRLRTYDGCPPPFD 250
K+ +G+ L+ ++ Y G P F+
Sbjct: 94 KSSKGRRMLKNVKIYVGVPKEFE 116
>UniRef50_Q6LXM6 Cluster: 50S ribosomal protein L13P; n=6;
Methanococcales|Rep: 50S ribosomal protein L13P -
Methanococcus maripaludis
Length = 137
Score = 43.2 bits (97), Expect = 0.004
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPAR-GPFHFRAPSKILWKTVRGMIPH 181
++ VV E+ ++GN K + ++ NP + GP + R P I+ + +RGM+P+
Sbjct: 27 EITVVNAEKAIMTGNKEYIFQKYVQLRTRKSISNPKKMGPKYPRRPDDIVRRVIRGMLPY 86
Query: 182 KTERGKNALRRLRTYDGCP 238
K RG A ++++ G P
Sbjct: 87 KKPRGVEAFKKIKIEVGVP 105
>UniRef50_Q7V521 Cluster: 50S ribosomal protein L13; n=32;
Bacteria|Rep: 50S ribosomal protein L13 -
Prochlorococcus marinus (strain MIT 9313)
Length = 150
Score = 39.5 bits (88), Expect = 0.045
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
VVVV ++I +SGN KL R R P +I+ K ++GM+PH
Sbjct: 55 VVVVNADKIRVSGNKANQKLYRRHSGRPGGMKVETFQALQDRLPERIVEKAIKGMLPHNA 114
Query: 188 ERGKNALRRLRTYDGCPPP 244
G+ R+L+ Y G P
Sbjct: 115 -LGRQLFRKLKVYRGPEHP 132
>UniRef50_Q3AW67 Cluster: 50S ribosomal protein L13; n=12;
Bacteria|Rep: 50S ribosomal protein L13 - Synechococcus
sp. (strain CC9902)
Length = 150
Score = 38.7 bits (86), Expect = 0.078
Identities = 25/79 (31%), Positives = 36/79 (45%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
VVVV E+I +SG + KL R R P +I+ K ++GM+PH
Sbjct: 55 VVVVNAEKIQVSGKKPQQKLYRRHSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNA 114
Query: 188 ERGKNALRRLRTYDGCPPP 244
G+ R+L+ Y G P
Sbjct: 115 -LGRQMYRKLKVYKGTEHP 132
>UniRef50_P39473 Cluster: 50S ribosomal protein L13P; n=4;
Thermoprotei|Rep: 50S ribosomal protein L13P -
Sulfolobus acidocaldarius
Length = 148
Score = 38.7 bits (86), Expect = 0.078
Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 KVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPAR-GPFHFRAPSKILWKTVRGMIPH 181
KV VV E+ ISG R + NP R G R P I+ +TVRGM+P
Sbjct: 33 KVYVVNAEKAIISGPRSRVLEGYSLLFTVKTMQNPYRQGIRRPRNPINIVKRTVRGMLP- 91
Query: 182 KTERGKNALRRLRTYDGCP 238
K + GK R L+ Y G P
Sbjct: 92 KNKLGKQIYRNLKAYIGIP 110
>UniRef50_Q9TLV3 Cluster: Putative uncharacterized protein rpl13;
n=1; Cyanidium caldarium|Rep: Putative uncharacterized
protein rpl13 - Cyanidium caldarium
Length = 143
Score = 38.3 bits (85), Expect = 0.10
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +2
Query: 2 NKVVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHF--RAPSKILWKTVRGMI 175
N V+++ Q+ I+GN +N K+ + +H R P++IL + V+GM+
Sbjct: 53 NFVIIINSRQVAITGN--KNTQKVYKRYSAKPGATKTESFYHLKKRIPNRILEQAVKGML 110
Query: 176 PHKTERGKNALRRLRTYDGCPPP 244
P K+ GK L+ Y G P
Sbjct: 111 P-KSVLGKKMFSHLKVYAGDSHP 132
>UniRef50_Q6L294 Cluster: 50S ribosomal protein L13P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L13P -
Picrophilus torridus
Length = 138
Score = 37.9 bits (84), Expect = 0.14
Identities = 20/82 (24%), Positives = 39/82 (47%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
+ +V ++ I+G R + + F R + +GP++ + +IL +++ M+P K
Sbjct: 28 ITIVNASKVVITG---RKEFIIDKFNNLRNTGSIRKGPYYPKTADRILKRSIGDMLPKKK 84
Query: 188 ERGKNALRRLRTYDGCPPPFDN 253
G AL+R Y P +N
Sbjct: 85 THGMEALKRCMVYANVPKSLEN 106
>UniRef50_Q12487 Cluster: 54S ribosomal protein L23, mitochondrial
precursor; n=12; Saccharomycetales|Rep: 54S ribosomal
protein L23, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 163
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRK-RCNVNPARGPFHFRAPSKILWKTVRGMIPHK 184
VVV C++I ++G F K R + + + +IL K V GM+P K
Sbjct: 57 VVVTNCQKIRVTGKKFEQKTYWSHSGRPGQLKLQTMNKVVADKGFGEILKKAVSGMLP-K 115
Query: 185 TERGKNALRRLRTYDGCPPPF 247
+ K L RL+ +DG P+
Sbjct: 116 NKLRKQRLDRLKVFDGSENPY 136
>UniRef50_A5Z5I7 Cluster: Putative uncharacterized protein; n=1;
Eubacterium ventriosum ATCC 27560|Rep: Putative
uncharacterized protein - Eubacterium ventriosum ATCC
27560
Length = 106
Score = 34.3 bits (75), Expect = 1.7
Identities = 21/67 (31%), Positives = 34/67 (50%)
Frame = -1
Query: 213 LLRAFLPRSVLCGIMPLTVFHRILDGALKWKGPRAGFTLHLLRRNDISLSLFLKKLPEML 34
+LR F R+ L FHR L+W+ R+G + + + +S S F+KK+P
Sbjct: 1 MLRYFSQRNSLAACSSSGCFHR-----LEWRACRSGESPYKFQSLSVSRSKFIKKVPSGR 55
Query: 33 ICSQRTT 13
+ SQ T+
Sbjct: 56 VISQSTS 62
>UniRef50_Q855Z2 Cluster: Gp80; n=1; Mycobacterium phage
Barnyard|Rep: Gp80 - Mycobacterium phage Barnyard
Length = 1111
Score = 34.3 bits (75), Expect = 1.7
Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Frame = +2
Query: 299 KPGRNYCHVG-----RLSHEI--GWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRIT-KDA 454
KP R C G +LS EI GWKYR R +RK + VKR+ YE K+ IT KD
Sbjct: 296 KPLRFVCDKGLTAKQQLSREIAKGWKYRVAQRPDMARRKAEYVKRLQYEFKI--ITDKDF 353
Query: 455 GE 460
G+
Sbjct: 354 GD 355
>UniRef50_Q9HKW8 Cluster: Transposase related protein; n=2;
Thermoplasmatales|Rep: Transposase related protein -
Thermoplasma acidophilum
Length = 350
Score = 33.9 bits (74), Expect = 2.2
Identities = 17/50 (34%), Positives = 31/50 (62%)
Frame = +2
Query: 323 VGRLSHEIGWKYRDVVRKLEDKRKGKAVKRVAYEKKLKRITKDAGEKVSK 472
+G+ + I KY+ + +KL+ K+K K +K++ + + RI +D KVSK
Sbjct: 157 LGKKAEHIHNKYKAIRKKLQKKKKYKLLKKI--KDRESRIVRDLNHKVSK 204
>UniRef50_A2AX70 Cluster: Gustatory receptor candidate 8; n=1;
Tribolium castaneum|Rep: Gustatory receptor candidate 8
- Tribolium castaneum (Red flour beetle)
Length = 379
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +2
Query: 47 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWKTVRGMI 175
N+ + ++ +SF K CN+ P+ F P K LWK ++G++
Sbjct: 5 NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWKKIQGVV 49
>UniRef50_UPI00003C0D3F Cluster: PREDICTED: similar to CG9186-PB,
isoform B; n=1; Apis mellifera|Rep: PREDICTED: similar
to CG9186-PB, isoform B - Apis mellifera
Length = 309
Score = 32.7 bits (71), Expect = 5.1
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 208 KSILATLCFVW--DHASYSLP*NLRWSSKMERSTSRIHVAPLTQE*HKLEFVPKEVARDV 35
KS L T VW HA + P N + S H + +TQ HK++F+ K V DV
Sbjct: 56 KSKLPTEVPVWIISHAGHVQPPNNLAITMPSNSNWTEHYSLMTQVQHKIDFIKKYVPEDV 115
Query: 34 DLFAANHN 11
+ H+
Sbjct: 116 KIHLIGHS 123
>UniRef50_UPI0000E4735E Cluster: PREDICTED: similar to pats1; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
pats1 - Strongylocentrotus purpuratus
Length = 1204
Score = 32.3 bits (70), Expect = 6.8
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 177 GIMPLTVFHRILDGALKWKGPRAGFTLHLLRRNDISLSLFLK--KLPEMLICSQRT 16
G +P +FHR++ A++W G R G + L R ISL + + L EML C + T
Sbjct: 940 GFLPDGLFHRLMTRAVRWMGERDGEPVILFYR-QISLMVDEEHHALLEMLPCHEAT 994
>UniRef50_Q5KRC3 Cluster: Putative uncharacterized protein; n=2;
Corynebacterium glutamicum|Rep: Putative uncharacterized
protein - Corynebacterium glutamicum (Brevibacterium
flavum)
Length = 118
Score = 32.3 bits (70), Expect = 6.8
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +3
Query: 378 LKTRGRARLLRELPMKRNLRGSPRMLVRRCRRR---QHHSLPS 497
L TR RL+ LP R+L+GS RML++ + Q HS PS
Sbjct: 27 LSTRQPYRLVAALPPARSLKGSSRMLIQNGPKNLADQSHSSPS 69
>UniRef50_O44496 Cluster: Putative uncharacterized protein; n=1;
Caenorhabditis elegans|Rep: Putative uncharacterized
protein - Caenorhabditis elegans
Length = 664
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 311 NYCHVGRLS--HEIGWKYRDVVRKLEDKRKGKAVK-RVAYEKKLKRITKDAGEKV 466
+YC G+ S H I WKYRD V ++ K K A++ R A E K I D +KV
Sbjct: 284 DYC-TGKTSILHRIQWKYRDAV-IVQAKEKMSAIELRRAIEAKTNVILHDVEQKV 336
>UniRef50_Q1AU63 Cluster: 50S ribosomal protein L13; n=3;
Bacteria|Rep: 50S ribosomal protein L13 - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 143
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 131 RAPSKILWKTVRGMIPHKTERGKNALRRLRTYDGCPPP 244
+ P +IL + VRGM+P KT + L++LR Y G P
Sbjct: 95 KRPEEILRQAVRGMMP-KTRLARRQLKKLRIYAGPEHP 131
>UniRef50_Q9SYL9 Cluster: 50S ribosomal protein L13, chloroplast
precursor; n=47; cellular organisms|Rep: 50S ribosomal
protein L13, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 241
Score = 31.9 bits (69), Expect = 8.9
Identities = 23/81 (28%), Positives = 33/81 (40%)
Frame = +2
Query: 8 VVVVRCEQINISGNFFRNKLKLMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKT 187
V+VV E++ +SG KL R R P +I+ VRGM+P K
Sbjct: 144 VIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIVEHAVRGMLP-KG 202
Query: 188 ERGKNALRRLRTYDGCPPPFD 250
G+ L+ Y G P +
Sbjct: 203 RLGRALFNHLKVYKGPDHPHE 223
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 534,519,649
Number of Sequences: 1657284
Number of extensions: 10382514
Number of successful extensions: 28495
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 27666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28478
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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