Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= epV31548
(415 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8I5A4 Cluster: Pre-mRNA splicing factor RNA helicase, ... 36 0.25
UniRef50_Q2F837 Cluster: Eukaryotic translation elongation facto... 34 1.0
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 33 1.8
UniRef50_Q7QHM9 Cluster: ENSANGP00000002208; n=7; Anopheles gamb... 33 2.3
UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;... 33 2.3
UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224; cell... 33 2.3
UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3; Coeloma... 31 7.1
UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genom... 31 7.1
UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397; ro... 31 7.1
UniRef50_Q0HN64 Cluster: O-antigen polymerase; n=1; Shewanella s... 31 9.3
>UniRef50_Q8I5A4 Cluster: Pre-mRNA splicing factor RNA helicase,
putative; n=1; Plasmodium falciparum 3D7|Rep: Pre-mRNA
splicing factor RNA helicase, putative - Plasmodium
falciparum (isolate 3D7)
Length = 1168
Score = 36.3 bits (80), Expect = 0.25
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 127 VNSTIFHTTAILHSPKGVSKEKRATNSFLFYIFYKACNVTLFYNLYKVI--HNISETFCY 300
V S + H I + KG KEK A N +I + LF N+YK +N S +FCY
Sbjct: 978 VASMLTHANNIFYVQKG--KEKEAENIKKMFIIEGGGDFLLFLNIYKQCEENNFSTSFCY 1035
Query: 301 D 303
D
Sbjct: 1036 D 1036
>UniRef50_Q2F837 Cluster: Eukaryotic translation elongation factor 1
alpha 1; n=25; Coelomata|Rep: Eukaryotic translation
elongation factor 1 alpha 1 - Homo sapiens (Human)
Length = 93
Score = 34.3 bits (75), Expect = 1.0
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 2 VRDMRQTVAVGVIKAVN 52
VRDMRQTVAVGVIKAV+
Sbjct: 57 VRDMRQTVAVGVIKAVD 73
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 33.5 bits (73), Expect = 1.8
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +2
Query: 374 RGGARYPIRPIVSR 415
RGGARYPIRPIVSR
Sbjct: 260 RGGARYPIRPIVSR 273
>UniRef50_Q7QHM9 Cluster: ENSANGP00000002208; n=7; Anopheles gambiae
str. PEST|Rep: ENSANGP00000002208 - Anopheles gambiae
str. PEST
Length = 486
Score = 33.1 bits (72), Expect = 2.3
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +1
Query: 130 NSTIFHTTAILHSPKG-VSKEKRATNSFLF-----YIFYKACNVTLF-YNLYKVIHNISE 288
N+TI HT + + G V + ATN FL Y+ CN L +N YKV ++E
Sbjct: 344 NATILHTLILERTELGPVCEANPATNKFLLDLILRYMQIVNCNRKLLSFNAYKVNEYVAE 403
Query: 289 TFCYDC 306
+F C
Sbjct: 404 SFAVGC 409
>UniRef50_Q5EMT9 Cluster: Elongation factor 1-alpha-like protein;
n=6; Fungi/Metazoa group|Rep: Elongation factor
1-alpha-like protein - Magnaporthe grisea (Rice blast
fungus) (Pyricularia grisea)
Length = 473
Score = 33.1 bits (72), Expect = 2.3
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 2 VRDMRQTVAVGVIKAVN 52
VRDMRQTVAVGVIK+V+
Sbjct: 438 VRDMRQTVAVGVIKSVD 454
>UniRef50_P13905 Cluster: Elongation factor 1-alpha; n=2224;
cellular organisms|Rep: Elongation factor 1-alpha -
Arabidopsis thaliana (Mouse-ear cress)
Length = 449
Score = 33.1 bits (72), Expect = 2.3
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +2
Query: 2 VRDMRQTVAVGVIKAVN 52
VRDMRQTVAVGVIK+V+
Sbjct: 414 VRDMRQTVAVGVIKSVD 430
>UniRef50_Q6WZ47 Cluster: Elongation factor-1 alpha; n=3;
Coelomata|Rep: Elongation factor-1 alpha - Anduzedoras
oxyrhynchus
Length = 257
Score = 31.5 bits (68), Expect = 7.1
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +2
Query: 5 RDMRQTVAVGVIKAVN 52
RDMRQTVAVGVIK+V+
Sbjct: 240 RDMRQTVAVGVIKSVD 255
>UniRef50_A7P6A6 Cluster: Chromosome chr9 scaffold_7, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr9 scaffold_7, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 154
Score = 31.5 bits (68), Expect = 7.1
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 2 VRDMRQTVAVGVIKAV 49
VRDMRQTVAVGVIK V
Sbjct: 127 VRDMRQTVAVGVIKNV 142
>UniRef50_Q05639 Cluster: Elongation factor 1-alpha 2; n=8397;
root|Rep: Elongation factor 1-alpha 2 - Homo sapiens
(Human)
Length = 463
Score = 31.5 bits (68), Expect = 7.1
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +2
Query: 2 VRDMRQTVAVGVIKAV 49
VRDMRQTVAVGVIK V
Sbjct: 426 VRDMRQTVAVGVIKNV 441
>UniRef50_Q0HN64 Cluster: O-antigen polymerase; n=1; Shewanella sp.
MR-4|Rep: O-antigen polymerase - Shewanella sp. (strain
MR-4)
Length = 557
Score = 31.1 bits (67), Expect = 9.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -2
Query: 123 SSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVC 16
++Y + AF TLP + KLTAL+ P T+C
Sbjct: 398 TAYMIEKSAFIEKKTTLPQALNFKLTALIIPALTLC 433
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 320,101,599
Number of Sequences: 1657284
Number of extensions: 4961549
Number of successful extensions: 12730
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12725
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19042509735
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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